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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 30, 2019 - Issue 1
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Research Article

Comparative analysis of the mitochondrial genomes of six newly sequenced diatoms reveals group II introns in the barcoding region of cox1

Cloe S. PogodaDepartment of Ecology and Evolutionary Biology, and Museum of Natural History, University of Colorado, Boulder, CO, USACorrespondence[email protected]
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,
Kyle G. KeepersDepartment of Ecology and Evolutionary Biology, and Museum of Natural History, University of Colorado, Boulder, CO, USAView further author information
,
Sarah E. HamsherDepartment of Ecology and Evolutionary Biology, and Museum of Natural History, University of Colorado, Boulder, CO, USAView further author information
,
Joshua G. StepanekDepartment of Ecology and Evolutionary Biology, and Museum of Natural History, University of Colorado, Boulder, CO, USAView further author information
,
Nolan C. KaneDepartment of Ecology and Evolutionary Biology, and Museum of Natural History, University of Colorado, Boulder, CO, USAView further author information
&
J. Patrick KociolekDepartment of Ecology and Evolutionary Biology, and Museum of Natural History, University of Colorado, Boulder, CO, USAView further author information
Pages 43-51 | Received 09 Jan 2018, Accepted 06 Mar 2018, Published online: 11 Mar 2018

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Lucie O. Hornberger, Isabella J. Maggard, Robin A. Matthews & A. Bruce Cahoon. (2023) Cryptomonas pyrenoidifera organellar genomes and estimation of its ITS2 sequence diversity using lineage directed barcode primers. Phycologia 62:3, pages 280-291.
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Hailong Huang, Huiyin Song, Zengxia Zhao, Feng Liu & Nansheng Chen. (2021) Complete mitochondrial genome of Coscinodiscus granii (Coscinodiscophyceae, Bacillariophyta). Mitochondrial DNA Part B 6:8, pages 2332-2334.
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Yanxin Yao, Feng Liu & Nansheng Chen. (2021) Complete mitochondrial genome of Rhizosolenia setigera (Coscinodiscophyceae, Bacillariophyta). Mitochondrial DNA Part B 6:8, pages 2319-2321.
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Hailong Huang, Yichao Wang, Huiyin Song, Jing Wang, Yang Chen, Yongfang Zhao, Feng Liu & Nansheng Chen. (2021) The complete mitochondrial genome and phylogenetic analysis of Coscinodiscus wailesii (Coscinodiscophyceae, Bacillariophyta). Mitochondrial DNA Part B 6:7, pages 1849-1851.
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Articles from other publishers (16)

Dongseok Kim, JunMo Lee, Chung Hyun Cho, Eun Jeung Kim, Debashish Bhattacharya & Hwan Su Yoon. (2022) Group II intron and repeat-rich red algal mitochondrial genomes demonstrate the dynamic recent history of autocatalytic RNAs. BMC Biology 20:1.
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Hailong Huang, Qing Xu, Huiyin Song & Nansheng Chen. (2022) Genetic Diversity and Geographical Distribution of the Red Tide Species Coscinodiscus granii Revealed Using a High-Resolution Molecular Marker. Microorganisms 10:10, pages 2028.
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Przemysław Dąbek, Romain Gastineau, Thomas G. Bornman, Claude Lemieux, Monique Turmel, Gustaaf Hallegraeff, Jean-Luc Mouget & Andrzej Witkowski. (2022) The blue diatom Haslea ostrearia from the Indian Ocean coast of South Africa, with comparative analysis of Haslea organellar genomes. Frontiers in Marine Science 9.
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Romain Gastineau, Chunlian Li, Matt P. Ashworth, Andrzej Witkowski, Monique Turmel, Ewa Górecka, Thomas A. Frankovich, Anna Wachnicka, Christopher S. Lobban, Edward C. Theriot, Christian Otis, Przemysław Dąbek, Anna Binczewska & Claude Lemieux. (2022) A New Insight Into Amicula, a Genus of Tiny Marine Benthic Diatoms With the Description of Two New Tropical Species and the Largest Mitogenome Known for a Stramenopile. Frontiers in Marine Science 9.
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Yichao Wang, Shuya Liu, Jing Wang, Yanxin Yao, Yang Chen, Qing Xu, Zengxia Zhao & Nansheng Chen. (2022) Diatom Biodiversity and Speciation Revealed by Comparative Analysis of Mitochondrial Genomes. Frontiers in Plant Science 13.
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Shuya Liu, Yichao Wang, Qing Xu, Mengjia Zhang & Nansheng Chen. (2021) Comparative analysis of full-length mitochondrial genomes of five Skeletonema species reveals conserved genome organization and recent speciation. BMC Genomics 22:1.
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Cüneyt Nadir Solak, Romain Gastineau, Claude Lemieux, Monique Turmel, Ewa Gorecka, Rosa Trobajo, Mateusz Rybak, Elif Yılmaz & Andrzej Witkowski. (2021) Nitzschia anatoliensis sp. nov., a cryptic diatom species from the highly alkaline Van Lake (Turkey) . PeerJ 9, pages e12220.
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Ewa Górecka, Romain Gastineau, Nikolai A. Davidovich, Olga I. Davidovich, Matt P. Ashworth, Jamal S. M. Sabir, Claude Lemieux, Monique Turmel & Andrzej Witkowski. (2021) Mitochondrial and Plastid Genomes of the Monoraphid Diatom Schizostauron trachyderma. International Journal of Molecular Sciences 22:20, pages 11139.
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Aaron Oliver, Sheila Podell, Agnieszka Pinowska, Jesse C. Traller, Sarah R. Smith, Ryan McClure, Alex Beliaev, Pavlo Bohutskyi, Eric A. Hill, Ariel Rabines, Hong Zheng, Lisa Zeigler Allen, Alan Kuo, Igor V. Grigoriev, Andrew E. Allen, David Hazlebeck & Eric E. Allen. (2021) Diploid genomic architecture of Nitzschia inconspicua, an elite biomass production diatom. Scientific Reports 11:1.
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Yang Chen, Yichao Wang, Kuiyan Liu, Feng Liu & Nansheng Chen. (2021) Development of a high-resolution molecular marker for tracking Pseudo-nitzschia pungens genetic diversity through comparative analysis of mitochondrial genomes. Journal of Applied Phycology 33:4, pages 2283-2298.
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Romain Gastineau, Gert Hansen, Michel Poulin, Claude Lemieux, Monique Turmel, Jean-François Bardeau, Vincent Leignel, Yann Hardivillier, Michèle Morançais, Joël Fleurence, Pierre Gaudin, Vona Méléder, Eileen J. Cox, Nikolaï A. Davidovich, Olga I. Davidovich, Andrzej Witkowski, Irena Kaczmarska, James M. Ehrman, Emilio Soler Onís, Antera Martel Quintana, Maja Mucko, Solenn Mordret, Diana Sarno, Boris Jacquette, Charlotte Falaise, Julie Séveno, Niels L. Lindquist, Philip S. KempJr.Jr., Elif Eker-Develi, Merve Konucu & Jean-Luc Mouget. (2021) Haslea silbo, A Novel Cosmopolitan Species of Blue Diatoms. Biology 10:4, pages 328.
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Yichao Wang, Yang Chen, Jing Wang, Feng Liu & Nansheng Chen. (2021) Mitochondrial genome of the harmful algal bloom species Odontella regia (Mediophyceae, Bacillariophyta). Journal of Applied Phycology 33:2, pages 855-868.
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Mengjia Zhang, Zongmei Cui, Feng Liu & Nansheng Chen. (2021) Definition of a High-Resolution Molecular Marker for Tracking the Genetic Diversity of the Harmful Algal Species Eucampia zodiacus Through Comparative Analysis of Mitochondrial Genomes. Frontiers in Microbiology 12.
Crossref
Feng Liu, Shuya Liu, Tianyu Huang & Nansheng Chen. (2019) Construction and comparative analysis of mitochondrial genome in the brown tide forming alga Aureococcus anophagefferens (Pelagophyceae, Ochrophyta). Journal of Applied Phycology 32:1, pages 441-450.
Crossref
Fatemeh Khani-Juyabad, Parisa Mohammadi & Mahbubeh Zarrabi. (2019) Comparative analysis of Chlorosarcinopsis eremi mitochondrial genome with some Chlamydomonadales algae. Physiology and Molecular Biology of Plants 25:5, pages 1301-1310.
Crossref
Sarah E. Hamsher, Kyle G. Keepers, Cloe S. Pogoda, Joshua G. Stepanek, Nolan C. Kane & J. Patrick Kociolek. (2019) Extensive chloroplast genome rearrangement amongst three closely related Halamphora spp. (Bacillariophyceae), and evidence for rapid evolution as compared to land plants. PLOS ONE 14:7, pages e0217824.
Crossref

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