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Expert Opinion on Biological Therapy Volume 12, 2012 - Issue sup1: Circulating nucleic acids in plasma and serum (CNAPS) update 2011
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Original Research

Unbiased approach to profile the variety of small non-coding RNA of human blood plasma with massively parallel sequencing technology

Dmitry V. SemenovInstitute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Ave. 8, Novosibirsk, 630090, Russia+7 383 363 5189; +7 383 363 5153; [email protected]
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Dmitry N. BaryakinInstitute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Ave. 8, Novosibirsk, 630090, Russia+7 383 363 5189; +7 383 363 5153; [email protected]
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Evgeny V. BrennerInstitute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Ave. 8, Novosibirsk, 630090, Russia+7 383 363 5189; +7 383 363 5153; [email protected]
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Alexander M. KurilshikovInstitute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Ave. 8, Novosibirsk, 630090, Russia+7 383 363 5189; +7 383 363 5153; [email protected]
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Gennady V. VasilievInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia
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Leonid A. BryzgalovInstitute of Cytology and Genetics SB RAS, Novosibirsk, Russia
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Elena D. ChikovaInstitute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Ave. 8, Novosibirsk, 630090, Russia+7 383 363 5189; +7 383 363 5153; [email protected]
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Julia A. FilippovaInstitute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Ave. 8, Novosibirsk, 630090, Russia+7 383 363 5189; +7 383 363 5153; [email protected]
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Elena V. KuliginaInstitute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Ave. 8, Novosibirsk, 630090, Russia+7 383 363 5189; +7 383 363 5153; [email protected]
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Vladimir A. RichterInstitute of Chemical Biology and Fundamental Medicine SB RAS, Lavrentiev Ave. 8, Novosibirsk, 630090, Russia+7 383 363 5189; +7 383 363 5153; [email protected]
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Pages S43-S51 | Published online: 18 Apr 2012

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Pál Perge, Zoltán Nagy, Ábel Decmann, Ivan Igaz & Peter Igaz. (2017) Potential relevance of microRNAs in inter-species epigenetic communication, and implications for disease pathogenesis. RNA Biology 14:4, pages 391-401.
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Andrey Turchinovich, Harald Surowy, Andrius Serva, Marc Zapatka, Peter Lichter & Barbara Burwinkel. (2014) Capture and Amplification by Tailing and Switching (CATS). RNA Biology 11:7, pages 817-828.
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Kenneth W. Witwer, Melissa A. McAlexander, Suzanne E. Queen & Robert J. Adams. (2013) Real-time quantitative PCR and droplet digital PCR for plant miRNAs in mammalian blood provide little evidence for general uptake of dietary miRNAs. RNA Biology 10:7, pages 1080-1086.
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Articles from other publishers (20)

Reyhaneh Rasizadeh, Parisa Shiri Aghbash, Javid Sadri Nahand, Taher Entezari-Maleki & Hossein Bannazadeh Baghi. (2023) SARS-CoV-2-associated organs failure and inflammation: a focus on the role of cellular and viral microRNAs. Virology Journal 20:1.
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Volker Baumann, Angelos-Theodoros Athanasiou, Omid R. Faridani, Andreas R. Schwerdtfeger, Bernard Wallner & Ralf Steinborn. (2023) Identification of extremely GC-rich micro RNAs for RT-qPCR data normalization in human plasma. Frontiers in Genetics 13.
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Tiago Pita, Joana R. Feliciano & Jorge H. Leitão. (2020) Extracellular RNAs in Bacterial Infections: From Emerging Key Players on Host-Pathogen Interactions to Exploitable Biomarkers and Therapeutic Targets. International Journal of Molecular Sciences 21:24, pages 9634.
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Carmen Elena Condrat, Dana Claudia Thompson, Madalina Gabriela Barbu, Oana Larisa Bugnar, Andreea Boboc, Dragos Cretoiu, Nicolae Suciu, Sanda Maria Cretoiu & Silviu Cristian Voinea. (2020) miRNAs as Biomarkers in Disease: Latest Findings Regarding Their Role in Diagnosis and Prognosis. Cells 9:2, pages 276.
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Yi Fei Wang & Jin Fu. (2019) Secretory and circulating bacterial small RNAs: a mini-review of the literature. ExRNA 1:1.
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Erwin A. van Vliet, Noora Puhakka, James D. Mills, Prashant K. Srivastava, Michael R. Johnson, Paolo Roncon, Shalini Das Gupta, Jenni Karttunen, Michele Simonato, Katarzyna Lukasiuk, Jan A. Gorter, Eleonora Aronica & Asla Pitkänen. (2017) Standardization procedure for plasma biomarker analysis in rat models of epileptogenesis: Focus on circulating microRNAs. Epilepsia 58:12, pages 2013-2024.
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A. V. Savelyeva, D. N. Bariakin, E. V. Kuligina, V. V. Morozov, V. A. Richter & D. V. Semenov. (2017) Circular RNAs of human blood cells, plasma, and plasma subfractions. Russian Journal of Bioorganic Chemistry 43:2, pages 115-125.
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Anna V. Savelyeva, Elena V. Kuligina, Dmitry N. Bariakin, Vadim V. Kozlov, Elena I. Ryabchikova, Vladimir A. Richter & Dmitry V. Semenov. (2017) Variety of RNAs in Peripheral Blood Cells, Plasma, and Plasma Fractions. BioMed Research International 2017, pages 1-10.
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Joëlle V. FritzAnna Heintz-BuschartAnubrata Ghosal, Linda WampachAlton Etheridge, David Galas & Paul Wilmes. (2016) Sources and Functions of Extracellular Small RNAs in Human Circulation. Annual Review of Nutrition 36:1, pages 301-336.
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Linda Fabris & George Adrian Calin. (2016) Circulating free xeno-microRNAs - The new kids on the block. Molecular Oncology 10:3, pages 503-508.
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Grigory A. Stepanov, Julia A. Filippova, Anna A. Nushtaeva, Elena V. Kuligina, Olga A. Koval, Vladimir A. Richter & Dmitriy V. Semenov. 2016. Circulating Nucleic Acids in Serum and Plasma ? CNAPS IX. Circulating Nucleic Acids in Serum and Plasma ? CNAPS IX 121 125 .
Anna V. Savelyeva, Dmitriy N. Baryakin, Elena D. Chikova, Elena V. Kuligina, Vladimir A. Richter & Dmitriy V. Semenov. 2016. Circulating Nucleic Acids in Serum and Plasma ? CNAPS IX. Circulating Nucleic Acids in Serum and Plasma ? CNAPS IX 117 119 .
Marta Fernandez‐Mercado, Lorea Manterola, Erika Larrea, Ibai Goicoechea, María Arestin, María Armesto, David Otaegui & Charles H. Lawrie. (2015) The circulating transcriptome as a source of non‐invasive cancer biomarkers: concepts and controversies of non‐coding and coding RNA in body fluids . Journal of Cellular and Molecular Medicine 19:10, pages 2307-2323.
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Anna M. L. Coenen-Stass, Imre Mäger & Mathew J. A. Wood. 2015. Circulating microRNAs in Disease Diagnostics and their Potential Biological Relevance. Circulating microRNAs in Disease Diagnostics and their Potential Biological Relevance 31 53 .
Meabh Beatty, Jasenka Guduric-Fuchs, Eoin Brown, Stephen Bridgett, Usha Chakravarthy, Ruth Esther Hogg & David Arthur Simpson. (2014) Small RNAs from plants, bacteria and fungi within the order Hypocreales are ubiquitous in human plasma. BMC Genomics 15:1.
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Cherie Blenkiron, Kathryn J. Askelund, Satyanarayan T. Shanbhag, Mandira Chakraborty, Maxim S. Petrov, Brett Delahunt, John A. Windsor & Anthony R. Phillips. (2014) MicroRNAs in Mesenteric Lymph and Plasma During Acute Pancreatitis. Annals of Surgery 260:2, pages 341-347.
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John Chevillet, Inyoul Lee, Hilary Briggs, Yuqing He & Kai Wang. (2014) Issues and Prospects of microRNA-Based Biomarkers in Blood and Other Body Fluids. Molecules 19:5, pages 6080-6105.
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David Galas, Paul Wilmes & Kai Wang. 2013. Encyclopedia of Metagenomics. Encyclopedia of Metagenomics 1 9 .
Dimitrios H RoukosArtur Silva, Adriana R Carneiro, Flávia Aburjaile, Luis C Guimarães, Rommel TJ Ramos, Thiago LP Castro, Vinicius Abreu, Wanderson M Silva, Paula Schneider & Vasco Azevedo. 2013. Next-Generation Sequencing & Molecular Diagnostics. Next-Generation Sequencing & Molecular Diagnostics 64 76 .
Kai Wang, Hong Li, Yue Yuan, Alton Etheridge, Yong Zhou, David Huang, Paul Wilmes & David Galas. (2012) The Complex Exogenous RNA Spectra in Human Plasma: An Interface with Human Gut Biota?. PLoS ONE 7:12, pages e51009.
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