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Time for T? Immunoinformatics addresses vaccine design for neglected tropical and emerging infectious diseases

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Chin Peng Lim, Boon Hui Kok, Hui Ting Lim, Candy Chuah, Badarulhisam Abdul Rahman, Abu Bakar Abdul Majeed, Michelle Wykes, Chiuan Herng Leow & Chiuan Yee Leow. (2023) Recent trends in next generation immunoinformatics harnessed for universal coronavirus vaccine design. Pathogens and Global Health 117:2, pages 134-151.
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Raquel Robleda-Castillo, Albert Ros-Lucas, Nieves Martinez-Peinado & Julio Alonso-Padilla. (2021) An Overview of Current Uses and Future Opportunities for Computer-Assisted Design of Vaccines for Neglected Tropical Diseases. Advances and Applications in Bioinformatics and Chemistry 14, pages 25-47.
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Angus Nnamdi Oli, Wilson Okechukwu Obialor, Martins Ositadimma Ifeanyichukwu, Damian Chukwu Odimegwu, Jude Nnaemeka Okoyeh, George Ogonna Emechebe, Samson Adedeji Adejumo & Gordon C Ibeanu. (2020) Immunoinformatics and Vaccine Development: An Overview. ImmunoTargets and Therapy 9, pages 13-30.
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Amy B Papaneri, Reed F Johnson, Jiro Wada, Laura Bollinger, Peter B Jahrling & Jens H Kuhn. (2015) Middle East respiratory syndrome: obstacles and prospects for vaccine development. Expert Review of Vaccines 14:7, pages 949-962.
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Articles from other publishers (28)

Raihan Rahman Imon, Abdus Samad, Rahat Alam, Ahad Amer Alsaiari, Md. Enamul Kabir Talukder, Mazen Almehmadi, Foysal Ahammad & Farhan Mohammad. (2023) Computational formulation of a multiepitope vaccine unveils an exceptional prophylactic candidate against Merkel cell polyomavirus. Frontiers in Immunology 14.
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Wei Liang, Hang Xiao, Jia-Yong Chen, Yung-Fu Chang, San-Jie Cao, Yi-Ping Wen, Rui Wu, Sen-Yan Du, Qi-Gui Yan, Xiao-Bo Huang & Qin Zhao. (2023) Immunogenicity and protective efficacy of a multi-epitope recombinant toxin antigen of Pasteurella multocida against virulent challenge in mice. Vaccine 41:14, pages 2387-2396.
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Hayeqa Shahwar Awan, Fatima Shahid, Almas Chaudhry & Amjad Ali. 2023. Omics approaches and technologies in COVID-19. Omics approaches and technologies in COVID-19 339 350 .
Robert Adamu Shey, Stephen Mbigha Ghogomu, Derrick Neba Nebangwa, Cabirou Mounchili Shintouo, Ntang Emmaculate Yaah, Bernis Neneyoh Yengo, Francis Nongley Nkemngo, Kevin Kum Esoh, Nelly Manuela Tatchou Tchatchoua, Tekoh Terriss Mbachick, Api Fon Dede, Arnaud Azonpi Lemoge, Roland Akwelle Ngwese, Bertha Fru Asa, Lawrence Ayong, Rose Njemini, Luc Vanhamme & Jacob Souopgui. (2022) Rational design of a novel multi-epitope peptide-based vaccine against Onchocerca volvulus using transmembrane proteins. Frontiers in Tropical Diseases 3.
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Aimee E. Mattei, Andres H. Gutierrez, William D. Martin, Frances E. Terry, Brian J. Roberts, Amy S. Rosenberg & Anne S. De Groot. (2022) In silico immunogenicity assessment for sequences containing unnatural amino acids: A method using existing in silico algorithm infrastructure and a vision for future enhancements. Frontiers in Drug Discovery 2.
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Mohammed Othman Aljahdali, Mohammad Habibur Rahman Molla & Foysal Ahammad. 2022. Antiviral Drugs - Intervention Strategies. Antiviral Drugs - Intervention Strategies.
Shilpa Shiragannavar & Shivakumar Madagi. 2022. Vaccine Development. Vaccine Development.
Priti Sharma, Pawan Sharma, Sheeba Ahmad & Ajay Kumar. (2022) Chikungunya Virus Vaccine Development: Through Computational Proteome Exploration for Finding of HLA and cTAP Binding Novel Epitopes as Vaccine Candidates. International Journal of Peptide Research and Therapeutics 28:2.
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Mujahed I. Mustafa & Shaza W. Shantier. (2022) Next generation multi epitope based peptide vaccine against Marburg Virus disease combined with molecular docking studies. Informatics in Medicine Unlocked 33, pages 101087.
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Arpana Parihar, Shivani Malviya & Raju Khan. 2022. Computational Approaches for Novel Therapeutic and Diagnostic Designing to Mitigate SARS-CoV-2 Infection. Computational Approaches for Novel Therapeutic and Diagnostic Designing to Mitigate SARS-CoV-2 Infection 357 378 .
Shikha Joon, Rajeev K. Singla & Bairong Shen. 2022. Translational Informatics. Translational Informatics 95 110 .
Shruti Pyasi, Vinita Sharma, Kumari Dipti, Nisha Amarnath Jonniya & Debasis Nayak. (2021) Immunoinformatics Approach to Design Multi-Epitope- Subunit Vaccine against Bovine Ephemeral Fever Disease. Vaccines 9:8, pages 925.
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Priti Sharma, Pawan Sharma, Sheeba & Ajay Kumar. (2021) Top Down Computational Approach: A Vaccine Development Step to Find Novel Superantigenic HLA Binding Epitopes from Dengue Virus Proteome. International Journal of Peptide Research and Therapeutics 27:2, pages 1469-1480.
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Pratik Ghosh, Swarnav Bhakta, Manojit Bhattacharya, Ashish Ranjan Sharma, Garima Sharma, Sang-Soo Lee & Chiranjib Chakraborty. (2021) A Novel Multi-Epitopic Peptide Vaccine Candidate Against Helicobacter pylori: In-Silico Identification, Design, Cloning and Validation Through Molecular Dynamics. International Journal of Peptide Research and Therapeutics 27:2, pages 1149-1166.
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Robert Adamu Shey, Stephen Mbigha Ghogomu, Cabirou Mounchili Shintouo, Francis Nongley Nkemngo, Derrick Neba Nebangwa, Kevin Esoh, Ntang Emmaculate Yaah, Muyanui Manka’aFri, Joel Ebai Nguve, Roland Akwelle Ngwese, Ferdinand Ngale Njume, Fru Asa Bertha, Lawrence Ayong, Rose Njemini, Luc Vanhamme & Jacob Souopgui. (2021) Computational Design and Preliminary Serological Analysis of a Novel Multi-Epitope Vaccine Candidate Against Onchocerciasis and Related Filarial Diseases. Pathogens 10:2, pages 99.
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Anne S. De Groot, Leonard Moise, Frances Terry, Andres H. Gutierrez, Pooja Hindocha, Guilhem Richard, Daniel Fredric Hoft, Ted M. Ross, Amy R. Noe, Yoshimasa Takahashi, Vinayaka Kotraiah, Sarah E. Silk, Carolyn M. Nielsen, Angela M. Minassian, Rebecca Ashfield, Matt Ardito, Simon J. Draper & William D. Martin. (2020) Better Epitope Discovery, Precision Immune Engineering, and Accelerated Vaccine Design Using Immunoinformatics Tools. Frontiers in Immunology 11.
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Rosângela Salerno-Gonçalves, Hervé Tettelin, David Luo, Qin Guo, Matthew T. Ardito, William D. Martin, Anne S. De Groot & Marcelo B. Sztein. (2020) Differential functional patterns of memory CD4+ and CD8+ T-cells from volunteers immunized with Ty21a typhoid vaccine observed using a recombinant Escherichia coli system expressing S. Typhi proteins. Vaccine 38:2, pages 258-270.
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Sher Signh, Jr-Rou Chiu, Kuei-Ling Sun & Emily Chia-Yu Su. (2019) Improving Allergenic Protein Prediction Using Physicochemical Features on Non-Redundant Sequences. Improving Allergenic Protein Prediction Using Physicochemical Features on Non-Redundant Sequences.
Sinosh Skariyachan, Sneha Basavaraj Challapilli, Swathi Packirisamy, Supreetha Toplar Kumargowda & Vaishnavi Sneha Sridhar. (2019) Recent Aspects on the Pathogenesis Mechanism, Animal Models and Novel Therapeutic Interventions for Middle East Respiratory Syndrome Coronavirus Infections. Frontiers in Microbiology 10.
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Robert Adamu Shey, Stephen Mbigha Ghogomu, Kevin Kum Esoh, Neba Derrick Nebangwa, Cabirou Mounchili Shintouo, Nkemngo Francis Nongley, Bertha Fru Asa, Ferdinand Njume Ngale, Luc Vanhamme & Jacob Souopgui. (2019) In-silico design of a multi-epitope vaccine candidate against onchocerciasis and related filarial diseases. Scientific Reports 9:1.
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P. Ambili Unni, A. M. Mohamed Thoufic Ali, Madhusmita Rout, A. Thabitha, S. Vino & S. Sajitha Lulu. (2018) Designing of an epitope-based peptide vaccine against walking pneumonia: an immunoinformatics approach. Molecular Biology Reports 46:1, pages 511-527.
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Sasisekhar Bennuru, Elise M. O’Connell, Papa M. Drame & Thomas B. Nutman. (2018) Mining Filarial Genomes for Diagnostic and Therapeutic Targets. Trends in Parasitology 34:1, pages 80-90.
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Utpal Kumar Adhikari & M. Mizanur Rahman. (2017) Overlapping CD8 + and CD4 + T-cell epitopes identification for the progression of epitope-based peptide vaccine from nucleocapsid and glycoprotein of emerging Rift Valley fever virus using immunoinformatics approach. Infection, Genetics and Evolution 56, pages 75-91.
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Dibyabhaba Pradhan, Monika Yadav, Rashi Verma, Noor Saba Khan, Lingaraja Jena & Arun Kumar Jain. (2017) Discovery of T-cell Driven Subunit Vaccines from Zika Virus Genome: An Immunoinformatics Approach. Interdisciplinary Sciences: Computational Life Sciences 9:4, pages 468-477.
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Andres H. Gutiérrez, Vicki J. Rapp-Gabrielson, Frances E. Terry, Crystal L. Loving, Leonard Moise, William D. Martin & Anne S. De Groot. (2017) T-cell epitope content comparison (EpiCC) of swine H1 influenza A virus hemagglutinin. Influenza and Other Respiratory Viruses 11:6, pages 531-542.
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Satarudra Prakash Singh, Deeksha Srivastava & Bhartendu Nath Mishra. (2017) Genome-wide identification of novel vaccine candidates for Plasmodium falciparum malaria using integrative bioinformatics approaches. 3 Biotech 7:5.
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Jiandong Shi, Jing Zhang, Sijin Li, Jing Sun, Yumei Teng, Meini Wu, Jianfan Li, Yanhan Li, Ningzhu Hu, Haixuan Wang & Yunzhang Hu. (2015) Epitope-Based Vaccine Target Screening against Highly Pathogenic MERS-CoV: An In Silico Approach Applied to Emerging Infectious Diseases. PLOS ONE 10:12, pages e0144475.
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Andres H. Gutiérrez, William D. Martin, Chris Bailey-Kellogg, Frances Terry, Leonard Moise & Anne S. De Groot. (2015) Development and validation of an epitope prediction tool for swine (PigMatrix) based on the pocket profile method. BMC Bioinformatics 16:1.
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