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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 27, 2016 - Issue 1
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Short Communication

Detecting mitochondrial signatures of selection in wild Tibetan pigs and domesticated pigs

Mingzhou LiBiodynamic Optical Imaging Center (BIOPIC), Peking-Tsinghua Center for Life Sciences, and School of Life Sciences, Peking University, Beijing, China, ;Institute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University, Ya’an, Sichuan, China, and Correspondence[email protected]
,
Long JinInstitute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University, Ya’an, Sichuan, China, and
,
Jideng MaInstitute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University, Ya’an, Sichuan, China, and
,
Shilin TianNovogene Bioinformatics Institute, Beijing, China
,
Ruiqiang LiBiodynamic Optical Imaging Center (BIOPIC), Peking-Tsinghua Center for Life Sciences, and School of Life Sciences, Peking University, Beijing, China, ;Novogene Bioinformatics Institute, Beijing, China
&
Xuewei LiInstitute of Animal Genetics and Breeding, College of Animal Science and Technology, Sichuan Agricultural University, Ya’an, Sichuan, China, and Correspondence[email protected]
Pages 747-752 | Received 30 Jan 2014, Accepted 05 Apr 2014, Published online: 09 May 2014

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Rui Liu, Long Jin, Keren Long, Qianzi Tang, Jideng Ma, Xun Wang, Li Zhu, An’an Jiang, Guoqing Tang, Yanzhi Jiang, Xuewei Li & Mingzhou Li. (2018) Analysis of mitochondrial DNA sequence and copy number variation across five high-altitude species and their low-altitude relatives. Mitochondrial DNA Part B 3:2, pages 847-851.
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Juan Deng, Jing Feng, Li Li, Tao Zhong, Linjie Wang, Jiazhong Guo, Gui Ba, Tianzeng Song & Hongping Zhang. (2018) Polymorphisms, differentiation, and phylogeny of 10 Tibetan goat populations inferred from mitochondrial D-loop sequences. Mitochondrial DNA Part A 29:3, pages 439-445.
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Lili Niu, Xiaoyong Chen, Ping Xiao, Qianjun Zhao, Jingxuan Zhou, Jiangtao Hu, Hongxin Sun, Jiazhong Guo, Li Li, Linjie Wang, Hongping Zhang & Tao Zhong. (2017) Detecting signatures of selection within the Tibetan sheep mitochondrial genome. Mitochondrial DNA Part A 28:6, pages 801-809.
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Thuy Nhien Thi Tran, Pan Ni, Jianhai Chen, Thuy Thi Le, Kemp Steve, Jianlin Han, Haiyan Wang & Shuhong Zhao. (2016) The complete mitochondrial genome of Mong Cai pig (Sus scrofa) in Vietnam. Mitochondrial DNA Part B 1:1, pages 226-227.
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Wen-Ting Chen, Min Li, Shi-Yun Hu, Su-Hao Wang & Ming-Long Yuan. (2023) Comparative mitogenomic and evolutionary analysis of Lycaenidae (Insecta: Lepidoptera): Potential association with high-altitude adaptation. Frontiers in Genetics 14.
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S. V. Nikitin, S. P. Knyazev, K. S. Shatohin, V. I. Zaporozheс, N. S. Judin & V. I. Ermolaev. (2022) NON-SPECIFIC HETEROSIS ON A COMPLEX OF FEATURES OF ADAPTABILITY ON THE EXAMPLE OF MINI-PIGS. Innovations and Food Safety:3, pages 79-89.
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Yanan Yang, Yongqing Li, Haonan Yuan, Xuanbo Liu, Yue Ren, Caixia Gao, Ting Jiao, Yuan Cai & Shengguo Zhao. (2022) Characterization of circRNA–miRNA–mRNA networks regulating oxygen utilization in type II alveolar epithelial cells of Tibetan pigs. Frontiers in Molecular Biosciences 9.
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K. S. Shatokhin, S. V. Nikitin, N. N. Kochnev, V. I. Zaporozhets, E. V. Korshunova & V. I. Ermolaev. (2022) Reproductive peculiarities of sows mini-pigs of the institute of Cytology and Genetics of the SB RAS from different families. Bulletin of NSAU (Novosibirsk State Agrarian University):2, pages 104-112.
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Tao Wang, Yuanyuan Guo, Shengwei Liu, Chaoxin Zhang, Tongyan Cui, Kun Ding, Peng Wang, Xibiao Wang & Zhipeng Wang. (2021) KLF4, a Key Regulator of a Transitive Triplet, Acts on the TGF-β Signaling Pathway and Contributes to High-Altitude Adaptation of Tibetan Pigs. Frontiers in Genetics 12.
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Chuanju Dong, Xiaodi Duan, Laghari Muhammad Younis, Meng Zhang, Xiao Ma, Baohua Chen, Xuejun Li & Peng Xu. (2020) Mitogenomic Perspectives on the Adaptation to Extreme Alkaline Environment of Amur ide (Leuciscus waleckii). Marine Biotechnology 22:2, pages 220-232.
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Chen WANG, Yao-sheng CHEN, Jian-lin HAN, De-lin MO, Xiu-jin LI & Xiao-hong LIU. (2019) Mitochondrial DNA diversity and origin of indigenous pigs in South China and their contribution to western modern pig breeds. Journal of Integrative Agriculture 18:10, pages 2338-2350.
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M. Muñoz, R. Bozzi, J. García-Casco, Y. Núñez, A. Ribani, O. Franci, F. García, M. Škrlep, G. Schiavo, S. Bovo, V. J. Utzeri, R. Charneca, J. M. Martins, R. Quintanilla, J. Tibau, V. Margeta, I. Djurkin-Kušec, M. J. Mercat, J. Riquet, J. Estellé, C. Zimmer, V. Razmaite, J. P. Araujo, Č. Radović, R. Savić, D. Karolyi, M. Gallo, M. Čandek-Potokar, A. I. Fernández, L. Fontanesi & C. Óvilo. (2019) Genomic diversity, linkage disequilibrium and selection signatures in European local pig breeds assessed with a high density SNP chip. Scientific Reports 9:1.
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Pan Ni, Ali Akbar Bhuiyan, Jian-Hai Chen, Jingjin Li, Cheng Zhang, Shuhong Zhao, Xiaoyong Du, Hua Li, Hui Yu, Xiangdong Liu & Kui Li. (2018) De novo assembly of mitochondrial genomes provides insights into genetic diversity and molecular evolution in wild boars and domestic pigs. Genetica 146:3, pages 277-285.
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Shen Song, Na Yao, Min Yang, Xuexue Liu, Kunzhe Dong, Qianjun Zhao, Yabin Pu, Xiaohong He, Weijun Guan, Ning Yang, Yuehui Ma & Lin Jiang. (2016) Exome sequencing reveals genetic differentiation due to high-altitude adaptation in the Tibetan cashmere goat (Capra hircus). BMC Genomics 17:1.
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