Citations (77)
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Guilhem Richard, Michael F. Princiotta, Dominique Bridon, William D. Martin, Gary D. Steinberg & Anne S. De Groot. (2022) Neoantigen-based personalized cancer vaccines: the emergence of precision cancer immunotherapy. Expert Review of Vaccines 21:2, pages 173-184.
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Corine Kruiswijk, Guilhem Richard, Merijn L.M. Salverda, Pooja Hindocha, William D. Martin, Anne S. De Groot & Elly Van Riet. (2020) In silico identification and modification of T cell epitopes in pertussis antigens associated with tolerance. Human Vaccines & Immunotherapeutics 16:2, pages 277-285.
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Sundos Khan, Matthew Parrillo, Andres H. Gutierrez, Frances E. Terry, Leonard Moise, William D. Martin & Anne S. De Groot. (2020) Immune escape and immune camouflage may reduce the efficacy of RTS,S vaccine in Malawi. Human Vaccines & Immunotherapeutics 16:2, pages 214-227.
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Patrick M. Reeves, Susan Raju Paul, Ann E. Sluder, Timothy A. Brauns & Mark C. Poznansky. (2017) Q-vaxcelerate: A distributed development approach for a new Coxiella burnetii vaccine. Human Vaccines & Immunotherapeutics 13:12, pages 2977-2981.
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Leonard Moise, Sarah Beseme, Ryan Tassone, Rui Liu, Farzana Kibria, Frances Terry, William Martin & Anne S. De Groot. (2016) T cell epitope redundancy: cross-conservation of the TCR face between pathogens and self and its implications for vaccines and autoimmunity. Expert Review of Vaccines 15:5, pages 607-617.
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Heather Johnson, Lenny Moise, Austin Menge, Sarah Beseme & Anne S De Groot. (2015) 8th vaccine renaissance: A creative nexus for vaccine developers. Human Vaccines & Immunotherapeutics 11:9, pages 2294-2295.
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Christopher S Eickhoff, Daniel Van Aartsen, Frances E Terry, Sheba K Meymandi, Mahmoud M Traina, Salvador Hernandez, William D Martin, Leonard Moise, Annie S De Groot & Daniel F Hoft. (2015) An immunoinformatic approach for identification of Trypanosoma cruzi HLA-A2-restricted CD8+ T cell epitopes. Human Vaccines & Immunotherapeutics 11:9, pages 2322-2328.
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Leonard Moise, Andres Gutierrez, Farzana Kibria, Rebecca Martin, Ryan Tassone, Rui Liu, Frances Terry, Bill Martin & Anne S De Groot. (2015) iVAX: An integrated toolkit for the selection and optimization of antigens and the design of epitope-driven vaccines. Human Vaccines & Immunotherapeutics 11:9, pages 2312-2321.
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Rui Liu, Leonard Moise, Ryan Tassone, Andres H Gutierrez, Frances E Terry, Kotou Sangare, Matthew T Ardito, William D Martin & Anne S De Groot. (2015) H7N9 T-cell epitopes that mimic human sequences are less immunogenic and may induce Treg-mediated tolerance. Human Vaccines & Immunotherapeutics 11:9, pages 2241-2252.
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Anne S De Groot, Lenny Moise, Rui Liu, Andres H Gutierrez, Ryan Tassone, Chris Bailey-Kellogg & William Martin. (2014) Immune camouflage: Relevance to vaccines and human immunology. Human Vaccines & Immunotherapeutics 10:12, pages 3570-3575.
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Pierre Leblanc, Leonard Moise, Cybelle Luza, Kanawat Chantaralawan, Lynchy Lezeau, Jianping Yuan, Mary Field, Daniel Richer, Christine Boyle, William D Martin, Jordan B Fishman, Eric A Berg, David Baker, Brandon Zeigler, Dale E Mais, William Taylor, Russell Coleman, H Shaw Warren, Jeffrey A Gelfand, Anne S De Groot, Timothy Brauns & Mark C Poznansky. (2014) VaxCelerate II: Rapid development of a self-assembling vaccine for Lassa fever. Human Vaccines & Immunotherapeutics 10:10, pages 3022-3038.
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Wendy M C Shattuck, Megan C Dyer, Joe Desrosiers, Loren D Fast, Frances E Terry, William D Martin, Leonard Moise, Anne S De Groot & Thomas N Mather. (2014) Partial pathogen protection by tick-bite sensitization and epitope recognition in peptide-immunized HLA DR3 transgenic mice. Human Vaccines & Immunotherapeutics 10:10, pages 3048-3059.
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Karim M Abdel-Hady, Andres H Gutierrez, Frances Terry, Joe Desrosiers, Anne S De Groot & Hassan ME Azzazy. (2014) Identification and retrospective validation of T-cell epitopes in the hepatitis C virus genotype 4 proteome. Human Vaccines & Immunotherapeutics 10:8, pages 2366-2377.
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Anne S De Groot, Lenny Moise, Rui Liu, Andres H Gutierrez, Frances Terry, Ousmane A Koita, Ted M Ross & William Martin. (2014) Cross-conservation of T-cell epitopes. Human Vaccines & Immunotherapeutics 10:2, pages 256-262.
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Anne S De Groot. (2013) Do Tregitopes have the potential to impact the current treatment landscape of autoimmune diseases?. Expert Review of Clinical Immunology 9:12, pages 1155-1157.
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Anne S De Groot, Frances Terry, Leslie Cousens & William Martin. (2013) Beyond humanization and de-immunization: tolerization as a method for reducing the immunogenicity of biologics. Expert Review of Clinical Pharmacology 6:6, pages 651-662.
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Anne S De Groot, Leo Einck, Leonard Moise, Michael Chambers, John Ballantyne, Robert W Malone, Matthew Ardito & William Martin. (2013) Making vaccines “on demand”. Human Vaccines & Immunotherapeutics 9:9, pages 1877-1884.
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Leonard Moise, Frances Terry, Matthew Ardito, Ryan Tassone, Howard Latimer, Christine Boyle, William D. Martin & Anne S. De Groot . (2013) Universal H1N1 influenza vaccine development. Human Vaccines & Immunotherapeutics 9:7, pages 1598-1607.
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Articles from other publishers (59)
S. M. Shahjahan Miah, Sandra Lelias, Andres H. Gutierrez, Mitchell McAllister, Christine M. Boyle, Lenny Moise & Anne S. De Groot. (2023) A SARS-CoV-2 NSP7 homolog of a Treg epitope suppresses CD4+ and CD8+ T cell memory responses. Frontiers in Immunology 14.
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Anne S. De Groot, Sundos Khan, Aimee E. Mattei, Sandra Lelias & William D. Martin. (2023) Does human homology reduce the potential immunogenicity of non-antibody scaffolds?. Frontiers in Immunology 14.
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William J. Dower, Angie Inkyung Park, Alice V. Bakker, Steven E. Cwirla, Praechompoo Pongtornpipat, Blake M. Williams, Prarthana Joshi, Bryan A. Baxter, Michael C. Needels & Ronald W. Barrett. (2023) A mechanistically novel peptide agonist of the IL-7 receptor that addresses limitations of IL-7 cytokine therapy. PLOS ONE 18:10, pages e0286834.
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Anne S De Groot, Brian J Roberts, Aimee Mattei, Sandra Lelias, Christine Boyle & William D Martin. (2023) Immunogenicity risk assessment of synthetic peptide drugs and their impurities. Drug Discovery Today 28:10, pages 103714.
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Kirk Haltaufderhyde, Brian J. Roberts, Sundos Khan, Frances Terry, Christine M. Boyle, Mitchell McAllister, William Martin, Amy Rosenberg & Anne S. De Groot. (2023) Immunoinformatic Risk Assessment of Host Cell Proteins During Process Development for Biologic Therapeutics. The AAPS Journal 25:5.
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Dennis L. Foss, Andres H. Gutiérrez, Meggan Bandrick, Sudeep Perumbakkam, Anne S. De Groot, William D. Martin, Frances E. Terry, Alvaro Aldaz, James R.D. Allison & Jose Angulo. (2023) Comparison of predicted T cell epitopes in porcine circovirus type 2 isolates from 2017 to 2021 and selected vaccines (EpiCC analysis) confirms the global relevance of a bivalent vaccine approach. Veterinary Vaccine 2:2, pages 100028.
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Yukio Nakamura, Meng Ling Moi, Takashi Shiina, Tadasu Shin-I & Ryuji Suzuki. (2023) Idiotope-Driven T-Cell/B-Cell Collaboration-Based T-Cell Epitope Prediction Using B-Cell Receptor Repertoire Sequences in Infectious Diseases. Viruses 15:5, pages 1186.
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Sarah Hall-Swan, Jared Slone, Mauricio M. Rigo, Dinler A. Antunes, Gregory Lizée & Lydia E. Kavraki. (2023) PepSim: T-cell cross-reactivity prediction via comparison of peptide sequence and peptide-HLA structure. Frontiers in Immunology 14.
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Simone Pecetta, S. Sohail Ahmed, Ronald Ellis & Rino Rappuoli. 2023. Plotkin's Vaccines. Plotkin's Vaccines
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Sebastian Wirsching, Michael Fichter, Maximiliano L. Cacicedo, Katharina Landfester & Stephan Gehring. (2022) Modification of Regulatory T Cell Epitopes Promotes Effector T Cell Responses to Aspartyl/Asparaginyl β-Hydroxylase. International Journal of Molecular Sciences 23:20, pages 12444.
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Kyle R Jackson, Dinler A Antunes, Amjad H Talukder, Ariana R Maleki, Kano Amagai, Avery Salmon, Arjun S Katailiha, Yulun Chiu, Romanos Fasoulis, Maurício Menegatti Rigo, Jayvee R Abella, Brenda D Melendez, Fenge Li, Yimo Sun, Heather M Sonnemann, Vladislav Belousov, Felix Frenkel, Sune Justesen, Aman Makaju, Yang Liu, David Horn, Daniel Lopez-Ferrer, Andreas F Huhmer, Patrick Hwu, Jason Roszik, David Hawke, Lydia E Kavraki & Gregory Lizée. (2022) Charge-based interactions through peptide position 4 drive diversity of antigen presentation by human leukocyte antigen class I molecules. PNAS Nexus 1:3.
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Jochem Gokemeijer. 2022. Bioanalytical Aspects in Biological Therapeutics. Bioanalytical Aspects in Biological Therapeutics
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Vibha Jawa, Jad Maamary, Michael Swanson, Shuli Zhang & Diana Montgomery. (2022) Implementing a Clinical Immunogenicity Strategy using Preclinical Risk Assessment Outputs. Journal of Pharmaceutical Sciences 111:4, pages 960-969.
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Ida Laurén, Sebastian Havervall, Henry Ng, Martin Lord, Aleksandra Pettke, Nina Greilert‐Norin, Lena Gabrielsson, Aikaterini Chourlia, Catarina Amoêdo‐Leite, Vijay S. Josyula, Mohamed Eltahir, Iliana Kerzeli, August J. Falk, Jonathan Hober, Wanda Christ, Anna Wiberg, My Hedhammar, Hanna Tegel, Joachim Burman, Feifei Xu, Elisa Pin, Anna Månberg, Jonas Klingström, Gustaf Christoffersson, Sophia Hober, Peter Nilsson, Mia Philipson, Pierre Dönnes, Robin Lindsay, Charlotte Thålin & Sara Mangsbo. (2022) Long‐term SARS‐CoV‐2‐specific and cross‐reactive cellular immune responses correlate with humoral responses, disease severity, and symptomatology. Immunity, Inflammation and Disease 10:4.
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Karina Winterling, William D. Martin, Anne S. De Groot, Jens Daufenbach, Steffen Kistner & Jörg Schüttrumpf. (2021) Development of a novel fully functional coagulation factor VIII with reduced immunogenicity utilizing an in silico prediction and deimmunization approach. Journal of Thrombosis and Haemostasis 19:9, pages 2161-2170.
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Vinayaka Kotraiah, Timothy W. Phares, Frances E. Terry, Pooja Hindocha, Sarah E. Silk, Carolyn M. Nielsen, Leonard Moise, Kenneth D. Tucker, Rebecca Ashfield, William D. Martin, Anne S. De Groot, Simon J. Draper, Gabriel M. Gutierrez & Amy R. Noe. (2021) Identification and Immune Assessment of T Cell Epitopes in Five Plasmodium falciparum Blood Stage Antigens to Facilitate Vaccine Candidate Selection and Optimization. Frontiers in Immunology 12.
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Anne S. De Groot, Ankit K. Desai, Sandra Lelias, S. M. Shahjahan Miah, Frances E. Terry, Sundos Khan, Cindy Li, John S. Yi, Matt Ardito, William D. Martin & Priya S. Kishnani. (2021) Immune Tolerance-Adjusted Personalized Immunogenicity Prediction for Pompe Disease. Frontiers in Immunology 12.
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Amy R. Noe, Frances E. Terry, Brian C. Schanen, Emily Sassano, Pooja Hindocha, Timothy W. Phares, Leonard Moise, Jayne M. Christen, Kenneth D. Tucker, Vinayaka Kotraiah, Donald R. DrakeIIIIII, William D. Martin, Anne S. De Groot & Gabriel M. Gutierrez. (2021) Bridging Computational Vaccinology and Vaccine Development Through Systematic Identification, Characterization, and Downselection of Conserved and Variable Circumsporozoite Protein CD4 T Cell Epitopes From Diverse Plasmodium falciparum Strains. Frontiers in Immunology 12.
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Lauren M. Meyers, Andres H. Gutiérrez, Christine M. Boyle, Frances Terry, Bethany G. McGonnigal, Andres Salazar, Michael F. Princiotta, Wiliam D. Martin, Anne S. De Groot & Leonard Moise. (2021) Highly conserved, non-human-like, and cross-reactive SARS-CoV-2 T cell epitopes for COVID-19 vaccine design and validation. npj Vaccines 6:1.
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Guilhem Richard, Anne S. De Groot, Gary D. Steinberg, Tzintzuni I. Garcia, Alec Kacew, Matthew Ardito, William D. Martin, Gad Berdugo, Michael F. Princiotta, Arjun V. Balar & Randy F. Sweis. (2021) Multi-step screening of neoantigens’ HLA- and TCR-interfaces improves prediction of survival. Scientific Reports 11:1.
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Kenneth D. Tucker, Brian C. Schanen, Timothy W. Phares, Emily Sassano, Frances E. Terry, Pooja Hindocha, Leonard Moise, Vinayaka Kotraiah, William D. Martin, Anne S. De Groot, Donald R. DrakeIIIIII, Gabriel M. Gutierrez & Amy R. Noe. (2021) Identification, Selection and Immune Assessment of Liver Stage CD8 T Cell Epitopes From Plasmodium falciparum. Frontiers in Immunology 12.
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Swan Tan, Andres Hazaet Gutiérrez, Phillip Charles Gauger, Tanja Opriessnig, Justin Bahl, Leonard Moise & Anne Searls De Groot. (2021) Quantifying the Persistence of Vaccine-Related T Cell Epitopes in Circulating Swine Influenza A Strains from 2013–2017. Vaccines 9:5, pages 468.
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Xuanwen Li, Yan An, Jing Liao, Li Xiao, Michael Swanson, Kirby Martinez‐Fonts, Jorge Alexander Pavon, Edward C. Sherer, Vibha Jawa, Fengqiang Wang, Xinliu Gao, Simon Letarte & Douglas D. Richardson. (2021)
Identification and characterization of a residual host cell protein hexosaminidase B associated with
N
‐glycan degradation during the stability study of a therapeutic recombinant monoclonal antibody product
. Biotechnology Progress 37:3.
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Marieme Dembele, Shao Tao, Amir H. Massoud, S. M. Shahjahan Miah, Sandra Lelias, Anne S. De Groot & Bruce D. Mazer. (2021) Tregitopes Improve Asthma by Promoting Highly Suppressive and Antigen-Specific Tregs. Frontiers in Immunology 12.
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Christian J. Maine, Guilhem Richard, Darina S. Spasova, Shigeki J. Miyake-Stoner, Jessica Sparks, Leonard Moise, Ryan P. Sullivan, Olivia Garijo, Melissa Choz, Jenna M. Crouse, Allison Aguilar, Melanie D. Olesiuk, Katie Lyons, Katrina Salvador, Melissa Blomgren, Jason L. DeHart, Kurt I. Kamrud, Gad Berdugo, Anne S. De Groot, Nathaniel S. Wang & Parinaz Aliahmad. (2021) Self-Replicating RNAs Drive Protective Anti-tumor T Cell Responses to Neoantigen Vaccine Targets in a Combinatorial Approach. Molecular Therapy 29:3, pages 1186-1198.
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Anne S. De Groot, Amy S. Rosenberg, S.M. Shahjahan Miah, Gail Skowron, Brian J. Roberts, Sandra Lélias, Frances E. Terry & William D. Martin. (2021) Identification of a potent regulatory T cell epitope in factor V that modulates CD4+ and CD8+ memory T cell responses. Clinical Immunology 224, pages 108661.
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Edison Ong, Xiaoqiang Huang, Robin Pearce, Yang Zhang & Yongqun He. (2021) Computational design of SARS-CoV-2 spike glycoproteins to increase immunogenicity by T cell epitope engineering. Computational and Structural Biotechnology Journal 19, pages 518-529.
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Luigi Buonaguro & Maria Tagliamonte. (2020) Selecting Target Antigens for Cancer Vaccine Development. Vaccines 8:4, pages 615.
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Lenny Moise, Andres H. Gutiérrez, Sundos Khan, Swan Tan, Matt Ardito, William D. Martin & Anne S. De Groot. (2020) New Immunoinformatics Tools for Swine: Designing Epitope-Driven Vaccines, Predicting Vaccine Efficacy, and Making Vaccines on Demand. Frontiers in Immunology 11.
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Vibha Jawa, Frances Terry, Jochem Gokemeijer, Shibani Mitra-Kaushik, Brian J. Roberts, Sophie Tourdot & Anne S. De Groot. (2020) T-Cell Dependent Immunogenicity of Protein Therapeutics Pre-clinical Assessment and Mitigation–Updated Consensus and Review 2020. Frontiers in Immunology 11.
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Meggan Bandrick, Andres H. Gutiérrez, Prerak Desai, Gonzalo Rincon, William D. Martin, Frances E. Terry, Anne S. De Groot & Dennis L. Foss. (2020) T cell epitope content comparison (EpiCC) analysis demonstrates a bivalent PCV2 vaccine has greater T cell epitope overlap with field strains than monovalent PCV2 vaccines. Veterinary Immunology and Immunopathology 223, pages 110034.
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Anne S. De Groot, Leonard Moise, Frances Terry, Andres H. Gutierrez, Pooja Hindocha, Guilhem Richard, Daniel Fredric Hoft, Ted M. Ross, Amy R. Noe, Yoshimasa Takahashi, Vinayaka Kotraiah, Sarah E. Silk, Carolyn M. Nielsen, Angela M. Minassian, Rebecca Ashfield, Matt Ardito, Simon J. Draper & William D. Martin. (2020) Better Epitope Discovery, Precision Immune Engineering, and Accelerated Vaccine Design Using Immunoinformatics Tools. Frontiers in Immunology 11.
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Anja Scholzen, Guilhem Richard, Leonard Moise, Eva Hartman, Chantal P. Bleeker-Rovers, Patrick M. Reeves, Susan Raju Paul, William D. Martin, Anne S. De Groot, Mark C. Poznansky, Ann E. Sluder & Anja Garritsen. (2019) Coxiella burnetii Epitope-Specific T-Cell Responses in Patients with Chronic Q Fever. Infection and Immunity 87:10.
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Christopher S. Eickhoff, Frances E. Terry, Linda Peng, Krystal A. Meza, Isaac G. Sakala, Daniel Van Aartsen, Leonard Moise, William D. Martin, Jill Schriewer, R. Mark Buller, Anne S. De Groot & Daniel F. Hoft. (2019) Highly conserved influenza T cell epitopes induce broadly protective immunity. Vaccine 37:36, pages 5371-5381.
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Joshua S. Hewitt, Anbu K. Karuppannan, Swan Tan, Phillip Gauger, Patrick G. Halbur, Priscilla F. Gerber, Anne S. De Groot, Leonard Moise & Tanja Opriessnig. (2019) A prime-boost concept using a T-cell epitope-driven DNA vaccine followed by a whole virus vaccine effectively protected pigs in the pandemic H1N1 pig challenge model. Vaccine 37:31, pages 4302-4309.
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Martijn D. B. van de Garde, Els van Westen, Martien C. M. Poelen, Nynke Y. Rots & Cécile A. C. M. van Els. (2019)
Prediction and Validation of Immunogenic Domains of Pneumococcal Proteins Recognized by Human CD4
+
T Cells
. Infection and Immunity 87:6.
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Robert Dingman & Sathy V. Balu-Iyer. (2019) Immunogenicity of Protein Pharmaceuticals. Journal of Pharmaceutical Sciences 108:5, pages 1637-1654.
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Anja Scholzen, Guilhem Richard, Leonard Moise, Laurie A. Baeten, Patrick M. Reeves, William D. Martin, Timothy A. Brauns, Christine M. Boyle, Susan Raju Paul, Richard Bucala, Richard A. Bowen, Anja Garritsen, Anne S. De Groot, Ann E. Sluder & Mark C. Poznansky. (2019) Promiscuous Coxiella burnetii CD4 Epitope Clusters Associated With Human Recall Responses Are Candidates for a Novel T-Cell Targeted Multi-Epitope Q Fever Vaccine. Frontiers in Immunology 10.
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A.S. De Groot, Z.B. Kazi, R.F. Martin, F.E. Terry, A.K. Desai, W.D. Martin & P.S. Kishnani. (2019) HLA- and genotype-based risk assessment model to identify infantile onset pompe disease patients at high-risk of developing significant anti-drug antibodies (ADA). Clinical Immunology.
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Roman Kogay & Christian Schönbach. 2019. Encyclopedia of Bioinformatics and Computational Biology. Encyclopedia of Bioinformatics and Computational Biology
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Els van Westen, Martien C. M. Poelen, Germie P. J. M. van den Dobbelsteen, Eliud O. Oloo, Martina M. Ochs, Nynke Y. Rots & Cecile A. C. M. van Els. (2018) Immunodominance in T cell responses elicited against different domains of detoxified pneumolysin PlyD1. PLOS ONE 13:3, pages e0193650.
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S. Sohail Ahmed, Ronald W. Ellis & Rino Rappuoli. 2018. Plotkin's Vaccines. Plotkin's Vaccines
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Jochem Gokemeijer, Vibha Jawa & Shibani Mitra-Kaushik. (2017) How Close Are We to Profiling Immunogenicity Risk Using In Silico Algorithms and In Vitro Methods?: an Industry Perspective. The AAPS Journal 19:6, pages 1587-1592.
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Andres H. Gutiérrez, Vicki J. Rapp-Gabrielson, Frances E. Terry, Crystal L. Loving, Leonard Moise, William D. Martin & Anne S. De Groot. (2017) T-cell epitope content comparison (EpiCC) of swine H1 influenza A virus hemagglutinin. Influenza and Other Respiratory Viruses 11:6, pages 531-542.
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Dinler A. Antunes, Maurício M. Rigo, Martiela V. Freitas, Marcus F. A. Mendes, Marialva Sinigaglia, Gregory Lizée, Lydia E. Kavraki, Liisa K. Selin, Markus Cornberg & Gustavo F. Vieira. (2017) Interpreting T-Cell Cross-reactivity through Structure: Implications for TCR-Based Cancer Immunotherapy. Frontiers in Immunology 8.
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Yamato Wada, Arnone Nithichanon, Eri Nobusawa, Leonard Moise, William D. Martin, Norio Yamamoto, Kazutaka Terahara, Haruhisa Hagiwara, Takato Odagiri, Masato Tashiro, Ganjana Lertmemongkolchai, Haruko Takeyama, Anne S. De Groot, Manabu Ato & Yoshimasa Takahashi. (2017) A humanized mouse model identifies key amino acids for low immunogenicity of H7N9 vaccines. Scientific Reports 7:1.
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Tarek A. Ahmad, Amrou E. Eweida & Laila H. El-Sayed. (2016) T-cell epitope mapping for the design of powerful vaccines. Vaccine Reports 6, pages 13-22.
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Vibha Jawa, Marisa K. Joubert, Qingchun Zhang, Meghana Deshpande, Suminda Hapuarachchi, Michael P. Hall & Gregory C. Flynn. (2016) Evaluating Immunogenicity Risk Due to Host Cell Protein Impurities in Antibody-Based Biotherapeutics. The AAPS Journal 18:6, pages 1439-1452.
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R. E. Hoeppli, K. G. MacDonald, M. K. Levings & L. Cook. (2016) How antigen specificity directs regulatory T-cell function: self, foreign and engineered specificity. HLA 88:1-2, pages 3-13.
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Lu He, Anne S. De Groot & Chris Bailey-Kellogg. (2015) Hit-and-run, hit-and-stay, and commensal bacteria present different peptide content when viewed from the perspective of the T cell. Vaccine 33:48, pages 6922-6929.
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Robert D. Bremel & E. Jane Homan. (2015) Extensive T-Cell Epitope Repertoire Sharing among Human Proteome, Gastrointestinal Microbiome, and Pathogenic Bacteria: Implications for the Definition of Self. Frontiers in Immunology 6.
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Marcus F.A. Mendes, Dinler A. Antunes, Maurício M. Rigo, Marialva Sinigaglia & Gustavo F. Vieira. (2015) Improved structural method for T-cell cross-reactivity prediction. Molecular Immunology 67:2, pages 303-310.
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Phyllis T. Losikoff, Sasmita Mishra, Frances Terry, Andres Gutierrez, Matt T. Ardito, Loren Fast, Martha Nevola, William D. Martin, Chris Bailey-Kellogg, Anne S. De Groot & Stephen H. Gregory. (2015) HCV epitope, homologous to multiple human protein sequences, induces a regulatory T cell response in infected patients. Journal of Hepatology 62:1, pages 48-55.
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Chris Bailey‐Kellogg, Andres H. Gutiérrez, Leonard Moise, Frances Terry, William D. Martin & Anne S. De Groot. (2014) CHOPPI: A web tool for the analysis of immunogenicity risk from host cell proteins in CHO‐based protein production. Biotechnology and Bioengineering 111:11, pages 2170-2182.
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Robert D. Bremel & E. Jane Homan. (2014) Frequency Patterns of T-Cell Exposed Amino Acid Motifs in Immunoglobulin Heavy Chain Peptides Presented by MHCs. Frontiers in Immunology 5.
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Leonard Moise, Frances Terry, Andres H. Gutierrez, Ryan Tassone, Phyllis Losikoff, Stephen H. Gregory, Chris Bailey-Kellogg, William D. Martin & Anne S. De Groot. (2014) Smarter vaccine design will circumvent regulatory T cell-mediated evasion in chronic HIV and HCV infection. Frontiers in Microbiology 5.
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Elly van Riet, Akira Ainai, Tadaki Suzuki, Gideon Kersten & Hideki Hasegawa. (2014) Combatting infectious diseases; nanotechnology as a platform for rational vaccine design. Advanced Drug Delivery Reviews 74, pages 28-34.
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Lu He, Anne S De Groot, Andres H Gutierrez, William D Martin, Lenny Moise & Chris Bailey-Kellogg. (2014) Integrated assessment of predicted MHC binding and cross-conservation with self reveals patterns of viral camouflage. BMC Bioinformatics 15:S4.
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Anne S De Groot, Phoebe De Groot & Yongqun He. (2014) ICoVax 2013: The 3rd ISV Pre-conference Computational Vaccinology Workshop. BMC Bioinformatics 15:S4.
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