Complete mitochondrial genome of golden conure (Guaruba guarouba)

Figures & data

Figure 1. The phylogenetic tree obtained in MrBayes for control region sequences indicating that the studied individual (bolded) belongs to Guaruba guarouba species. The tree was generated with Bayesian method in MrBayes 3.2.5 (Ronquist et al. 2012) using the model GTR + I + G as suggested by jModelTest 2.1.7 (Guindon & Gascuel 2003; Darriba et al. 2012). 10,000,000 MCMC repetitions with burn-in of 25% was assumed. Tree was rooted with Pyrrhura rupicola sequence. Genbank accession numbers are shown in parenthesis. Bayesian posterior probabilities are shown at nodes.

Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61:539–542.

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Guindon S, Gascuel O. 2003. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol. 52:696–704.

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Darriba D, Taboada GL, Doallo R, Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nat Methods. 9:772.

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