Complete mitochondrial genome of the pumpkin fruit fly, Bactrocera depressa (Diptera: Tephritidae)

Figures & data

Figure 1. Phylogeny of Bactrocera based on 13 protein-coding genes, constructed using the Bayesian inference method. Values at each node are percentage Bayesian posterior probabilities. The scale bar indicates the number of substitutions per site. Subgeneric names are provided on the right side of the tree. The two dipteran species D. yakuba and Ceratitis capitata were included as outgroups. GenBank accession numbers are as follows: B. zonata, KP296150 (Choudhary et al. 2015); B. arecae, KR233259 (Yong et al. 2015); B. correcta, JX456552 (Unpublished); B. dorsalis, DQ845759 (Unpublished); B. philippinensis, DQ995281 (Unpublished); B. carambolae, EF014414 (Unpublished); B. papayae, DQ917578 (Unpublished); B. tryoni, HQ130030 (Nardi et al. 2010); B. umbrosa, KT881558 (Yong et al. 2016); B. melastomatos, KT881557 (Yong et al. 2016); B. latifrons, KT881556 (Yong et al. 2016); B. invadens, KX534207 (Zhang et al. 2016a); B. diaphora, KT159730 (Zhang et al. 2016b); B. scutellata, KP722192 (Unpublished); B. tau, KP711431 (Tan et al. 2016); B. minax, HM776033 (Zhang et al. 2014); B. cucurbitae, JN635562 (Unpublished); B. caudata, KT625492 (Yong et al. 2016); B. oleae, AY210703 (Nardi et al. 2003); D. yakuba, NC001322 (Clary & Wolstenholme 1985); and C. capitata AJ242872 (Spanos et al. 2000).

Choudhary JS, Naaz N, Prabhakar CS, Rao MS, Das B. 2015. The mitochondrial genome of the peach fruit fly, Bactrocera zonata (Saunders) (Diptera: Tephritidae): complete DNA sequence, genome organization, and phylogenetic analysis with other tephritids using next generation DNA sequencing. Gene. 569:191–202.

 PubMed Web of Science ®Google Scholar

Yong HS, Song SL, Lim PE, Chan KG, Chow WL, Eamsobhana P. 2015. Complete mitochondrial genome of Bactrocera arecae (Insecta: Tephritidae) by next-generation sequencing and molecular phylogeny of Dacini tribe. Sci Rep. 5:15155

 PubMed Web of Science ®Google Scholar

Nardi F, Carapelli A, Boore JL, Roderick GK, Dallai R, Frati F. 2010. Domestication of olive fly through a multi-regional host shift to cultivated olives: comparative dating using complete mitochondrial genomes. Mol Phylogenet Evol. 57:678–686.

 PubMed Web of Science ®Google Scholar

Yong HS, Song SL, Lim PE, Eamsobhana P, Suana IW. 2016. Complete mitochondrial genome of three Bactrocera fruit flies of subgenus Bactrocera (Diptera: Tephritidae) and their phylogenetic implications. PLoS One. 11:e0148201

 PubMed Web of Science ®Google Scholar

Zhang LJ, Jiang LH, Wei CY, Liu RS, Liu XL, Li JG, Xue HJ. 2016a. The status of Bactrocera invadens Drew, Tsuruta & White (Diptera: tephritidae) inferred from complete mitochondrial genome analysis. Mitochondrial DNA Part B. 1:680–681.

 PubMed Web of Science ®Google Scholar

Zhang K-J, Liu L, Rong X, Zhang G-H, Liu H, Liu Y-H. 2016b. The complete mitochondrial genome of Bactrocera diaphora (Diptera: Tephtitidae). Mitochondrial DNA Part A. 27:4314–4315.

 PubMed Web of Science ®Google Scholar

Tan M, Zhang R, Xiang C, Zhou X. 2016. The complete mitochondrial genome of the pumpkin fruit fly, Bactrocera tau (Diptera: Tephritidae). Mitochondrial DNA Part A. 27:2502–2503.

 PubMed Web of Science ®Google Scholar

Zhang B, Nardi F, Hull-Sanders H, Wan X, Liu Y. 2014. The complete nucleotide sequence of the mitochondrial genome of Bactrocera minax (Diptera:Tephritidae). PLoS One. 9:e100558.

 PubMed Web of Science ®Google Scholar

Nardi F, Carapelli A, Dallai R, Frati F. 2003. The mitochondrial genome of the olive fly Bactrocera oleae: two haplotypes from distant geographical locations. Insect Mol Biol. 12:605–611.

 PubMed Web of Science ®Google Scholar

Clary DO, Wolstenholme DR. 1985. The mitochondrial DNA molecular of Drosophila yakuba: nucleotide sequence, gene organization, and genetic code. J Mol Evol. 22:252–271.

 PubMed Web of Science ®Google Scholar

Spanos L, Koutroumbas G, Kotsyfakis M, Louis C. 2000. The mitochondrial genome of the mediterranean fruit fly, Ceratitis capitata. Insect Mol Biol. 9:139–144.

 PubMed Web of Science ®Google Scholar