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Mitochondrial DNA
The Journal of DNA Mapping, Sequencing, and Analysis
Volume 22, 2011 - Issue sup1: FishBol: The Fish Barcode of Life
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Research Papers

DNA barcoding of morid cods reveals deep divergence in the antitropical Halargyreus johnsoni but little distinction between Antimora rostrata and Antimora microlepis

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Pages 21-26 | Received 13 May 2010, Accepted 12 Oct 2010, Published online: 27 Jan 2011

Figures & data

Figure 1.  Kimura 2-parameter (K2P) distance neighbor-joining tree of 35 COI sequences from H. johnsonii (NT = New Zealand–Tasmania; Ot = other regions), five sequences from A. microlepis (Am) and 21 sequences from A. rostrata (Ar). BOLD accession numbers are given for each specimen followed by a sample ID, and location abbreviation (HM, Heard and McDonald Islands; MI, Macquarie Island; NA, North Atlantic Ocean; NP, North Pacific Ocean; NZ, New Zealand; RS, Ross Sea; SS, South Sandwich Islands); five sequences are taken from Genbank, H. johnsonii: FJ164639 and EU148182, A. rostrata: EU148703/74/75. The tree has been rooted with the morid outgroup L. microcephalus. Numbers at nodes are bootstrap percentages (>70%) after 1000 replicates, based on distance and Bayesian posterior probability values (>90%); scale bar is for K2P distance.

Figure 1.  Kimura 2-parameter (K2P) distance neighbor-joining tree of 35 COI sequences from H. johnsonii (NT = New Zealand–Tasmania; Ot = other regions), five sequences from A. microlepis (Am) and 21 sequences from A. rostrata (Ar). BOLD accession numbers are given for each specimen followed by a sample ID, and location abbreviation (HM, Heard and McDonald Islands; MI, Macquarie Island; NA, North Atlantic Ocean; NP, North Pacific Ocean; NZ, New Zealand; RS, Ross Sea; SS, South Sandwich Islands); five sequences are taken from Genbank, H. johnsonii: FJ164639 and EU148182, A. rostrata: EU148703/74/75. The tree has been rooted with the morid outgroup L. microcephalus. Numbers at nodes are bootstrap percentages (>70%) after 1000 replicates, based on distance and Bayesian posterior probability values (>90%); scale bar is for K2P distance.

Table I.  Nucleotide distance (% Kimura two-parameter) within and between species of H. johnsonii, A. rostrata, A. microlepis, and L. microcephalus.

Table II.  Meristic counts from H. johnsonii from the Southern Ocean just north of the Ross Sea and New Zealand, along with values given in Gon and Heemstra (Citation1990) and Paulin (Citation1983).

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