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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 27, 2016 - Issue 4
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Mitogenome Announcement

The complete chloroplast genome sequence of Panax quinquefolius (L.)

Kyunghee KimDepartment of Plant Science, Plant Genomics and Breeding Institute and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea and ;Phyzen Genomics Institute, Gwanak-gu, Seoul, Republic of Korea
,
Sang-Choon LeeDepartment of Plant Science, Plant Genomics and Breeding Institute and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea and
,
Junki LeeDepartment of Plant Science, Plant Genomics and Breeding Institute and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea and
,
Nam-Hoon KimDepartment of Plant Science, Plant Genomics and Breeding Institute and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea and
,
Woojong JangDepartment of Plant Science, Plant Genomics and Breeding Institute and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea and
&
Tae-Jin YangDepartment of Plant Science, Plant Genomics and Breeding Institute and Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea and Correspondence[email protected]
Pages 3033-3034 | Received 02 Jun 2015, Accepted 14 Jun 2015, Published online: 10 Jul 2015
 
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Abstract

The complete chloroplast genome sequence of Panax quinquefolius, an important medicinal herb, was generated by de novo assembly with low-coverage whole-genome sequence data and manual correction. A circular 156 088-bp chloroplast genome showed typical chloroplast genome structure comprising a large single copy region of 86 095 bp, a small single copy region of 17 993 bp, and a pair of inverted repeats of 26 000 bp. The chloroplast genome had 87 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis with the chloroplast genome revealed that P. quinquefolius is much closer to P. ginseng than P. notoginseng.

Declaration of interest

This work was carried out with the support of the Cooperative Research Program for Agriculture Science & Technology Development (Project no. PJ01103001), Rural Development Administration, Republic of Korea.

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