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Research Article

Synthesis and structure–activity relationship of novel conformationally restricted analogues of serotonin as 5-HT6 receptor ligands

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Pages 443-450 | Received 19 Feb 2011, Accepted 06 Jun 2011, Published online: 21 Jul 2011

Abstract

5-Hydroxytryptamine 6 receptors (5-HT6R) are being perceived as the possible target for treatment of cognitive disorders as well as obesity. The present article deals with the design, synthesis, in vitro binding and structure–activity relationship of a novel series of tetracyclic tryptamines with the rigidized N-arylsulphonyl, N-arylcarbonyl and N-benzyl substituents as 5-HT6 receptor ligands. The chiral sulphonyl derivatives 15a and 17a showed high affinity at 5-HT6R with the Ki of 23.4 and 20.5 nM, respectively. The lead compound from the series 15a has acceptable ADME properties, adequate brain penetration and is active in animal models of cognition like Novel Object Recognition Task (NORT) and water maze.

Introduction

5-Hydroxytryptamine 6 receptor (5-HT6R), a member of GPCR family, plays an important role in cognition and memory formation, due to its exclusive localization in the brain regions associated with learning and memoryCitation1–3. Blockage of 5-HT6R enhances the cognitive process through cholinergic and glutamatergic neurotransmission, which demonstrates the therapeutic usefulness of this receptor in the central nervous system (CNS)-mediated disorders such as schizophrenia and Alzheimer’s disease (AD)Citation4–10.

Up to date, a lot of research work has been done in identifying different 5-HT6R agonists and antagonists, out of which a few of them are currently in the different stages of clinical development. SAM-531Citation11, SB-742457Citation12,Citation13 and LY-483518 (SGS-518)Citation14,Citation15 are the phase II clinical candidates, whereas Lu AE58054Citation16, PRX-07034, SYN-114Citation8 and SUVN-502Citation17 are the phase I clinical candidates as of today.

Tryptamine derivatives are reported as 5-HT6 receptor ligandsCitation18 as they have the structural resemblance with the 5-hydroxytryptamine (5-HT). N-Phenylsulphonyl-5-methoxy-N,N-dimethyltryptamine (MS-245) () is a 5-HT6R antagonist reported by Glennon et al. in early 2000Citation18. Russell et al.Citation19 have reported conformational constraint of the basic amine of the tryptamine on the adjacent phenyl ring with flexible N-arylsulphonyl motif leading to a compound with good binding affinity of 7.2 nM towards the 5-HT6 receptor (, 36). Mooradian et al.Citation20 has published the 5-HT6R binding activity for some carbazole derivatives, which are in fact the conformationally restricted tryptamines. Several other research groups attempted modifications of N,N-dimethylamino ethyl side chain at C3 of indole of MS-245. Pyrrolidine derivatives (, ALX1161) have been reported by Abate et al.Citation21 as potent 5-HT6 ligands. Most studied compound from these modifications ALX1161 has shown excellent affinity and selectivityCitation22,Citation23. This compound was shown to possess excellent brain exposure (brain/plasma 23.4, i.p.) and reasonable oral bioavailability in rats (%F = 17). Liu et al.Citation24 reported the novel class of azepinoindoles by rigidifying the amino side chain to C2 position of indole (, 37) to overcome the selectivity issue of 1-sulphonyl tryptamine over its 5-HT subtypes. Subsequently, additional classes where the pyrrolidine and piperidine rings are directly attached to C3 of indole (, 38 and 39) were also reported by Cole et al.Citation25

Figure 1.  Structures of I and reported 5-HT6 ligands.

Figure 1.  Structures of I and reported 5-HT6 ligands.

Interestingly, though a lot of work has already been published on the effect of changes made in the nature of side chain of tryptamines with respect to activity, to the best of our knowledge there are almost no studies reported so far to understand the relative necessity or required orientation of N-arylsulphonyl moiety with respect to activity. Hence, in our efforts for identifying the novel 5-HT6R ligands, we thought of constraining the MS-245 compound by tethering the arylsulphonyl groups to C2 of indole, which will result in tetracyclic compounds I (). The proposed tetracyclic derivatives of tryptamines, compounds I, include all the components of MS-245 like arylsulphonyl substitution and side chain at C3 of indole. Since the compounds I bear all the necessary pharmacophoric functionalities like a basic amine, the aromatic rings in a triangular arrangement as well as the sulphonamide linkageCitation7, it was expected to bind to 5-HT6 receptors. Once the desired activity is achieved in the series, it was further aimed to see the effect of replacing the sulphonyl moiety of the tetracyclic compounds with a methylene or a carbonyl group and study the effect of the change on the binding to 5-HT6 receptors.

Methods

General considerations

Infrared spectra were recorded in KBr disc and in solid state using Perkin-Elmer model 1600 FT-IR spectrophotometer (Perkin-Elmer, Norwalk, CT). Electrospray ionization mass spectra were recorded on a API 4000 triple quadruple instrument (MDS-SCIEX, Concord, Ontario, Canada). 1H-NMR spectra were obtained on a Bruker proton NMR spectrometer (Fallanden, Switzerland) at 400 MHz. Deuterated reagents were used as solvents and were commercially procured. Tetramethylsilane (TMS) was used as an internal standard. Chemical shift values are expressed in parts per million (δ) and coupling constants are expressed in Hz. Chromatography refers to column chromatography performed using 60–120 mesh silica gel and executed under nitrogen pressure (flash chromatography) conditions. All the reagents and chemicals used were of ‘reagent grade’. Various substituted indoles were synthesized in-house with the help of reported procedures and were characterized thoroughly before using. Substituted benzenesulphonyl chlorides were synthesized in-house from the substituted benzene by chlorosulphonation or from the corresponding amines using the diazo intermediates. Substituted benzyl chlorides were either commercially obtained or synthesized in-house from the substituted toluene by N-chlorosuccinimide reaction. Similarly, substituted benzoyl chlorides were synthesized in-house from the corresponding benzoic acids using thionyl chloride.

Synthesis

General procedure for the synthesis of derivatives 6–20

1-(2′-Bromophenylsulphonyl)-N,N-dimethyltryptamine derivative (0.286 mmol) was taken in a 100-mL three-necked round-bottomed flask, along with N,N-dimethylacetamide (10 mL), potassium acetate (0.343 mmol, 33.6 mg) and tetrakis (triphenyl phosphine) palladium(0), (0.0143 mmol, 16.5 mg). The reaction mixture was maintained under nitrogen atmosphere at 125–130°C with stirring for 5 h. After the completion of reaction (TLC), excess of dimethylacetamide was distilled off under reduced pressure. The residue obtained was purified by silica gel column chromatography using methanol:ethyl acetate (2:8) as an eluent. The compounds 620 were characterized by the spectral data.

2-Methoxy-10-[(2-N,N-dimethylamino-2-methyl)ethyl]benzo[d]isothiazolo[3,2-a]indol-S,S-dioxide (15). 

Yield: 68.5%; Mp 202.4–205.3°C; IR (cm−1): 2933, 1461, 1438, 1323, 1174, 582; Mass (m/z): 371.2 (M+H)+; 1H-NMR (CDCl3): δ 1.00–1.02 (3H, d, J = 6.44 Hz, CHCH3), 2.44 (6H, s, N(CH3)2), 2.81–2.87 (1H, dd, J = 13.44 Hz, CH2CH(CH3)NMe2), 2.93–3.10 (1H, m, CH(CH3)NMe2), 3.18–3.23 (1H, dd, J = 13.44, 3.20 Hz, CH2CH(CH3)NMe2), 3.87 (3H, s, OCH3), 6.99–7.02 (2H, m), 7.45–7.59 (1H, m), 7.58–7.62 (1H, m), 7.64–7.69 (1H, m), 7.79–7.85 (2H, m), 13C-NMR (CDCl3): δ 14.12, 28.23, 40.78, 55.75, 60.02, 103.59, 112.50, 114.78, 116.05, 122.26, 122.66, 127.34, 128.22, 128.44, 130.21, 133.91, 134.76, 138.11, 156.28; HRMS: [M+H]+ C20H22N2O3S calc. 371.1429, found. 371.1422.

General procedure for the synthesis of derivatives 21–30

1-(2′-Bromobenzyl)-N,N-dimethyltryptamine derivative (0.286 mmol) was taken in a 100-mL, three-necked round-bottomed flask, along with N,N-dimethylacetamide (10 mL), potassium acetate (0.343 mmol, 33.6 mg) and tetrakis (triphenyl phosphine) palladium(0), (0.0143 mmol, 16.5 mg). The reaction mixture was maintained under nitrogen atmosphere at 125–130°C with stirring for 5 h. After the completion of reaction (TLC), excess of dimethylacetamide was distilled off under reduced pressure. The residue obtained was purified by silica gel column chromatography using methanol:ethyl acetate (2:8) as an eluent. The compounds 2130 were characterized by the spectral data.

2-Fluoro-10-(2-N,N-dimethylaminoethyl)isoindolo[2,1-a]indole (24). 

Light brown syrupy mass. Yield: 66.2%; IR (cm−1): 2952, 2458, 1483, 1189, 791, 720; Mass (m/z): 295.3 (M+H)+; 1H-NMR (CDCl3): δ 2.86 (6H, s, N(CH3)2), 3.21–3.25 (2H, m, CH2CH2NMe2), 3.34–3.44 (2H, m, CH2CH2NMe2), 5.18 (2H, s, C5-CH2), 6.98–7.04 (1H, dt, J = 9.23, 2.52 Hz), 7.36–7.42 (1H, dt), 7.43–7.49 (2H, m), 7.53–7.56 (1H, dd, J = 10.2, 2.44 Hz), 7.60–7.62 (1H, d, J = 7.44 Hz), 8.04–8.06 (1H, d, J = 7.52 Hz); 13C-NMR (DMSO-d6): δ 19.41, 41.67, 48.52, 56.26, 100.44, 100.49, 104.27, 104.50, 109.38, 109.64, 110.85, 110.95, 121.48, 124.00, 127.4, 128.11, 130.09, 131.65, 131.70, 131.80, 142.22, 142.27, 155.95, 158.25; HRMS: [M+H]+ C19H19FN2 calc. 295.1610, found. 295.1610.

General procedure for the synthesis of derivatives 31–35

1-(2′-Bromobenzoyl)-N,N-dimethyltryptamine derivative (0.286 mmol) was taken in a 100-mL, three-necked round-bottomed flask, along with N,N-dimethylacetamide (10 mL), potassium acetate (0.343 mmol, 33.6 mg) and tetrakis (triphenylphosphine) palladium(0), (0.0143 mmol, 16.5 mg). The reaction mixture was maintained under nitrogen atmosphere at 125–130°C with stirring for 5 h. After the completion of reaction (TLC), excess of dimethylacetamide was distilled off under reduced pressure. The residue obtained was purified by silica gel column chromatography using methanol:ethyl acetate (2:8) as an eluent. The compounds 3135 were characterized by the following spectral data.

2-Phenyl-10-(2-N,N-dimethylaminoethyl)isoindolo[2,1-a]indol-5-one (31). 

Yield; 56.1 %; Mp 148–151°C; IR (cm−1): 2939, 1716, 1606, 1458, 1361, 885, 758; Mass (m/z): 367.3 (M+H)+; 1H-NMR (CDCl3): δ 2.39 (6H, s, N(CH3)2), 3.07–3.11 (2H, m, CH2CH2NMe2), 3.65–3.70 (2H, m, CH2CH2NMe2), 7.32–7.39 (2H, m), 7.44–7.48 (2H, m), 7.52–7.55 (2H, m), 7.57–7.64 (4H, m), 7.77–7.80 (1H, dd), 7.91–7.93 (1H, d, J = 7.84 Hz); 13C-NMR (DMSO-d6): δ 27.33, 50.18, 63.86, 117.91, 123.93, 124.31, 126.94, 130.21, 130.68, 131.91, 132.32, 133.93, 134.02, 137.34, 138.02, 139.18, 139.50, 139.99, 140.54, 141.32, 145.41, 166.52; HRMS: [M+H]+ C25H22N2O calc 367.1810, found. 367.1801.

Radioligand-binding assay for human 5-HT6 receptor

Compounds were investigated by the reported procedure. In brief, receptor source and radioligand used were human recombinant expressed in HEK-293 cells and [3H]LSD (60–80 Ci/mmol), respectively. The final ligand concentration was 1.5 nM and non-specific determinant was methiothepin mesylate (0.1 SYMBOL 109\f “Symbol”M). The reference compound and positive control is methiothepin mesylate.

Reactions were carried out in 50 mM Tris–HCl (pH 7.4) containing 10 mM MgCl2, 0.5 mM EDTA for 60 min at 37°C. The reaction was terminated by rapid vacuum filtration onto glass fibre filters. Radioactivity trapped onto the filters was determined and compared with control values in order to ascertain any interactions of test compound(s) with the cloned serotonin–5-HT6-binding site.

Novel Object Recognition Task

The lead compound 15a was tested in Novel Object Recognition Task (NORT)Citation26 using the detailed protocol given in the Supporting information.

Results and discussion

Chemistry

The general synthetic strategy used for the title compounds 635 has been summarized in . Various substituted tryptamines 1 were either obtained commercially or synthesized using various literature methodsCitation27. Treatment of substituted tryptamines 1, with the desired substituted 2-bromoarylsulphonyl/carbonyl/alkyl chlorides in presence of appropriate base and the polar aprotic solvents yielded the intermediates, N-arylsulphonyl/carbonyl/alkyl tryptamines 2, which were isolated and fully characterized. The N-(2′-bromo)arylsulphonyl/carbonyl/alkyl tryptamines 2 were cyclized using various palladium catalysts and well-known literature procedures of Heck reactionCitation28–30, to get the desired compounds 635.

Scheme 1.  Reagents and conditions: (a) base, DMF at 10°C, followed by Ar-X-Cl, 3–4 h, (b) tetrakis triphenylphosphine palladium (Pd(P(Ph)3)4), CH3COOK, DMA, 120–130°C, 3–4 h.

Scheme 1.  Reagents and conditions: (a) base, DMF at 10°C, followed by Ar-X-Cl, 3–4 h, (b) tetrakis triphenylphosphine palladium (Pd(P(Ph)3)4), CH3COOK, DMA, 120–130°C, 3–4 h.

Synthesis of α-substituted/unsubstituted tryptamines was achieved by the route depicted in . The various substituted indoles were converted to their 3-formyl derivatives 3, by the known literature methods. These substituted 3-formyl indoles were then condensed with nitro alkane under alkaline conditions. The adducts 4 were reduced using lithium aluminium hydride to the corresponding α-substituted/unsubstituted tryptamines 5, which were further dimethylated using well-known reductive formylation procedures involving formaldehyde and sodium cyanoborohydride, to the substituted tryptamines, 1.

Scheme 2.  Reagents and conditions: (a) nitro alkane, piperidine, acetic acid, benzene, reflux, 5–6 h, (b) LiAlH4, THF, reflux, 1–2 h, (c) CH3OH, HCHO, NaBH3CN, pH 6.5 with CH3COOH, reflux, 2 h.

Scheme 2.  Reagents and conditions: (a) nitro alkane, piperidine, acetic acid, benzene, reflux, 5–6 h, (b) LiAlH4, THF, reflux, 1–2 h, (c) CH3OH, HCHO, NaBH3CN, pH 6.5 with CH3COOH, reflux, 2 h.

The ESI-MS of all the compounds exhibited the [M+H]+ as the parent ion. Additionally, there is a peak at [M-72+H]+ with the typical loss of dimethylaminoethyl fragment. 1H-NMR spectra of all the compounds exhibited the prominent presence of dimethylaminoethyl side-chain protons along with the aromatic protons. All the other spectral data was found to be satisfactory to confirm their structures.

Structure–activity relationship

All the synthesized compounds 620 (X = SO2), 2130 (X = CH2) and 3135 (X = CO) were evaluated for their binding affinity towards 5-HT6 receptor using the radioligand-binding assay. The inhibitory constant, Ki values were summarized in .

Table 1.  Ki values for compounds 635 on 5-HT6 (h) receptors.

All the sulphonamide compounds 619 show high to moderate affinity towards the receptor with the exception of the compound 20 (Ki = >1000 nM). The lower alkoxy racemate analogues 15 (R1 = 2-OCH3, R2 = CH3, Ki = 11.6 nM) and 17 (R1 = 2-OC2H5, R2 = CH3, Ki = 11.1 nM) show high affinity towards the receptor. The other analogues with no substitution at R2 position (R2 = H) resulted in 3–8-fold decrease in binding affinities compared with those of substituted ones (R2 = CH3 or C2H5) as can be seen by comparing the Ki values of compounds 6 (R2 = H, Ki = 246 nM) and 14 (R2 = H, Ki = 96 nM) with compounds 11 (R2 = CH3, Ki = 87 nM) and 15 (R2 = CH3, Ki = 11.6 nM), respectively.

Apart from the alkoxy substitution at second position (R1) in sulphonamide analogues, the other substituents like halogens (2-F, 2-Br, 4-Cl), lower alkyl groups (2-CH3) and 2-phenyl groups are well-tolerated for 5-HT6 receptor binding as can be seen from the Ki values. The higher alkoxy analogues like 2-O-iPr (compound 19, Ki = 239 nM), 2-OBn (compound 18, Ki = 100 nM), 2-OCH2cyHex (compound 20, Ki = >1000 nM) show decrease in binding affinity as compared with its lower alkoxy 2-OCH3 (compound 15, Ki = 11.6 nM) and 2-OC2H5 (compound 17, Ki = 11.1 nM) analogues, indicating that lower alkoxy groups are more suitable at this position. Replacement of methyl group at R2 position by ethyl group resulted in 2–3-fold decrease in binding affinity as can been seen by comparing the Ki values of compound 15 (Ki = 11.6 nM) with 16 (Ki = 28.3 nM).

The other synthesized benzyl analogues 2130 and benzoyl analogues 3135 show the reverse trend, where substitution at R2 position with alkyl groups lead to decrease in binding affinities as compared with their unsubstituted analogues as can be seen by comparing the Ki values of compound 22 (R2 = H, Ki = 86 nM) and 34 (R2 = H, Ki = 135 nM) with 23 (R2 = CH3, Ki = 279 nM) and 32 (R2 = CH3, Ki = 296 nM), respectively.

Among the benzyl analogues (X = CH2), compounds 24 with fluoro substitution at second position in ring A shows the highest affinity with Ki value 24.3 nM, whereas its chloro analogue (compound 25, Ki = 80.7 nM) shows nearly 3-fold decrease in binding affinity. The insertion of additional fluoro group (ring A) in compound 24 resulted in 6-fold decrease in binding affinity (compound 27, Ki = 153 nM), whereas insertion of chloro at seventh position in ring D in compound 24 resulted in marginal decrease in affinity towards receptor (compound 30, Ki = 37.6 nM).

Based on the Ki results, the most potent sulphonamides, 2-methoxy 15 and 2-ethoxy 17 analogues with α-methyl substitution in the side chain were resolved and tested for their specific rotation and binding affinities at 5-HT6R. The specific rotation and Ki values are summarized in . In both of the cases, laevo isomers are more active than dextro isomers, indicating that the specific orientation of the dimethylamino substitution in the side chain is important as far as the 5-HT6 receptor binding is concerned.

Table 2.  The comparative in vitro data of racemic and resolved compounds 15 and 17.

Compounds 15a and 17a were further evaluated for the CYP liability and metabolic stability studies. The compounds strongly inhibited CYP2D6 human enzyme with IC50’s of 0.49 and 1.2 µM for 15a and 17a, respectively. Inhibition of the more abundant CYP3A4 appears to be not an issue with this series with IC50’s estimated to be above 35 µM for both 15a and 17a. Compound 17a is extensively metabolized (92.1% and 57.9%) compared with compound 15a (73.8% and 41.8%) in rat and human, respectively.

The compound 15a was tested for its functional agonism/antagonism. The functional agonism/antagonism assay was conducted at MDS Pharma Services. The assay measured changes in cAMP level in a recombinant CHO cell line in agonist and antagonist mode. The compound did not exhibit any agonist activity but showed full antagonism of 5-HT6-induced cAMP accumulation. In fact, the compound reduced basal cAMP level indicating a inverse agonist activity.

To estimate the oral bioavailability in rats, pharmacokinetic studies were performed on compound 15a and the results are given in .

Table 3.  Pharmacokinetic profile of compound 15a.

In order to assess the brain-penetrating ability of compound 15a, it was dosed at 3 mg/kg, i.p. to male Wistar rats and sacrificed at 30 min post dose and brain and plasma exposure were measured using LC-MS/MS. The brain exposure of compound 15a was 772 ng/g, which is equivalent to 2.08 µM with a Cb/Cp of 6.24, indicating that the compound has high brain penetration.

Compound 15a was further evaluated for its cognitive potential in NORT paradigm and Morris water maze. Compound 15a has shown improvement in cognitive performance at 1 mg/kg oral dose in NORT model (). Most of the memory-enhancing compounds show an inverted U-shaped dose response. This could be one of the reasons why the compound showed positive effect only at the lowest tested doses. In Morris water maze model, it has significantly reversed the scopolamine-induced memory deficit at 1 and 3 mg/kg, p.o. dose, which was apparent from lesser target latency ().

Figure 2.  Novel Object Recognition Task. *p < 0.05 (Student’s ‘t’ test)

Figure 2.  Novel Object Recognition Task. *p < 0.05 (Student’s ‘t’ test)

Figure 3.  Effect of compound 15a in Morris water maze (acute dosing). *p < 0.05 (one way ANNOVA followed by Dunnett’s ‘t’ test).

Figure 3.  Effect of compound 15a in Morris water maze (acute dosing). *p < 0.05 (one way ANNOVA followed by Dunnett’s ‘t’ test).

Conclusions

From the results as discussed above, it is evident that the rigidized derivatives of N-arylsulphonyl tryptamines have slightly reduced affinity than the corresponding flexible derivatives. The major finding of the study, however, was the role of alkyl substitution at α-position of the amino alkyl side chain. The presence of smaller alkyl groups in the tryptamine side chain results in increased affinity to the 5-HT6R, as is evident from the Ki values of compounds 15 and 17. Also, the lead compound from the series was found to have excellent brain penetration, an important requirement for CNS drugs.

Supplemental material

Supplementary Material

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Acknowledgement

The authors wish to acknowledge the support received from Mr. Venkateswarlu Jasti, CEO, Suven Life Sciences Ltd., Hyderabad, India.

Declaration of interest

The authors report no declarations of interest.

Supporting information

Analytical data of rest of the compounds, protocols for Morris water maze test, NORT and CYP inhibition assay were given in the Supporting information.

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