Abstract
Sebastes vulpes is considered a valid species despite the presence of extensive hybrids. To obtain the basic genetic intraspecific structure, we analyzed the complete mitogenome of S. vulpes using next-generation sequencing. The complete mitogenome was 16,462 bp in length containing 13 protein-coding genes (PCGs), 2 rRNAs, 22 tRNAs and 1 control region. The complete mitogenome comprised 27.7% A, 26.5% T, 17.1% G and 28.6% C, showing a minor AT bias (54.3%). The initial codon in all PCGs was ATG, excluding COX1 (GTG). The majority of stop codons in the PCGs were TAA, excluding ND1 and ND3 (TAG), ND4 (AGA) and Cytb (incomplete termination codon, T). All tRNAs had a typical cloverleaf structure, excluding tRNASer (AGY), which lacked the DHU arm. The complete mitogenome of S. vulpes can be used to study hybridisation and on-going speciation.
Acknowledgements
This work was supported by a grant from the Korea Institute of Ocean Science and Technology (PE99204) and the project “Construction of Ocean Research Station and their Application Studies” funded by the Ministry of Oceans and Fisheries, Korea (PM57972).
Declaration of interest
The authors declare no conflicts of interest. The authors alone are responsible for the content and production of this manuscript.