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Research Articles

Identification and Molecular Characterization of Rhizopus delemar from Eastern Ghats of State of India and its Biotechnological Applications

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Pages 429-439 | Received 27 Apr 2023, Accepted 27 Jun 2023, Published online: 15 Jul 2023

References

  • Anusuya S, Sathiyabama M. 2014. Effect of chitosan on rhizome rot disease of turmeric caused by Pythium aphanidermatum. ISRN Biotechnol 2014:305349.
  • Arduini I, Kokubun M, Shao G, Licausi F. 2019. Crop response to waterlogging. Front in Plant Sci. 10.
  • Bal B, Das AP. 2020. Recovery of manganese from low grade ferromanganese ores using Bacillus safensis. In: Kalamdhad, AS, editor. Biological and Pharmaceutical Applications of Nanomaterials. Singapore: Springer, p273–288.
  • Bal B, Ghosh S, Das AP. 2018. Microbial recovery and recycling of manganese waste and their future application: a review. Geomicrobiol J 1:1521–0529.
  • Bal B, Armstrong PB, Das AP. 2016. Development of indigenous bio-sensing methodology for rapid and low-cost endotoxin detection system. Sensor Network Data Communic S1:005.
  • Bal B, Nayak S, Das AP. 2017. Recent Advances in Molecular Techniques for the Diagnosis of Foodborne Diseases in Nanotechnology applications in food. Elsevier, Edited by Alexandra Elena Oprea, Amsterdam, Netherlands.
  • Bhattacharjee J, Mishra S, Das AP. 2022. Recent advances in sensor-based detection of toxic dyes for bioremediation application: a review. Appl Biochem Biotechnol 194(10):4745–4764.
  • Bhuvanendra KH, Udaya SA, Nayaka C, Kini SR, Shetty HS, Prakash HS. 2010. Biochemical characterization of Fusarium oxysporum f. sp. cubense isolates from India. Afr J Biotechnol 9(4):523–530.
  • Biswal P, Ghosh S, Pal A, Das AP. 2021. Exploration of probiotic microbial biodiversity in acidic environments (curd) and their futuristic pharmaceutical applications. Geomicrobiol J. 39(3-5):176-185..
  • Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248–254.
  • Britannica T. 2018. Mycotoxin. Editors of Ency Britannica. Available at https://www.britannica.com/science/mycotoxin.
  • Das AP, Ghosh S, Mohanty S, Sukla LB. 2015a. Consequences of manganese compounds: a review. Toxicol Environ Chem 96(7):981–997.
  • Das AP, Bal B, Mahapatra PS. 2015a. Chromogenic Biosensors for Pathogen Detection. Biological and Pharmaceutical Applications of Nanomaterial. Boca Raton, Florida: CRC Press; Taylor & Francis, p273–288.
  • Das AP, Bal B, Mahapatra PS. 2015b. Horseshoe crabs in modern day biotechnological applications. In: Carmichael RH, Botton ML, Shin PKS, Cheung SG, editors. Changing Global Perspectives on Biology. Conservation and Management of Horseshoe Crabs. Switzerland: Springer, p463–474.
  • Das AP, Ghosh S. 2018. Bioleaching of manganese from mining waste materials. Mater Today Proc 5(1):2381–2390.
  • Das AP. 2016. Biosensors: the future of diagnostics. Sensor Network Data Commun. S1:e107.
  • Das AP, Mishra S. 2010. Biodegradation of the metallic carcinogen hexavalent chromium Cr (VI) by an indigenously isolated bacterial strain. J Carcinog 9:6.
  • Das AP, Singh S. 2011. Occupational health assessment of chromite toxicity among Indian miners. Indian J Occup Environ Med 15(1):6–13.
  • Das AP, Sukla LB, Pradhan N, Nayak S2. 2011. Manganese biomining: a review. Bioresour Technol 102(16):7381–7387.
  • Das A, Swain S, Panda S, Pradhan N, Sukla L. 2012. Reductive acid leaching of low-grade manganese ores. GM 02(04):70–72.
  • de Hoog GS, Guarro J, Gene J, Figueras MJ. 2015. Atlas of Clinical Fungi (Version 4.1.2). Utrecht, The Netherlands: Centraalbureau voor Schimmelcultures.
  • Dohroo NP, Kansal S, Ahluwalia N. 2015. Studies on eco-farmer-friendly practices for management of soft rot of ginger (Zingiber officinale). Indian Phytopath 68(1):93–96.
  • Dong Z, Wang Z. 2011. Isolation and characterization of an exopolygalacturonase from Fusarium oxysporum f. sp. cubense race 1 and race 4. BMC Biochem 12(1):51.
  • Ellis JJ. 1985. Species and varieties in Rhizopus arrhizus - Rhizopus oryzae group as indicated by their DNA complementarity. Mycologia 77(2):243–247.
  • FAO. 2019. New Standards to Curb the Global Spread of Plant Pests and Diseases. Web page of the Food and Agriculture Organization of the United Nations, p1.
  • First Advance Estimates of Area and Production of Horticulture Crops. 2021–2022, p1–35. https://agricoop.nic.in/sites/default/files/202122%20%28First%20Advance%20Estimates%29%20%281%29_0.pdf.
  • Foster JW, Waksman SA. 1939. The production of fumaric acid by molds belonging to the genus Rhizopus. J Am Chem Soc 61(1):127–135.
  • Gao X, Jin C, Li C, Zhang W, Wang Y, Geng Y, Zhang M, Li Y. 2023. First report of Rhizopus oryzae causing rhizome rot on ginger in China. Plant Dis. 107(1):231.
  • Ghosh S, Mohanty S, Nayak S, Sukla L, Das AP. 2016. Molecular identification of indigenous manganese solubilising bacterial biodiversity from manganese mining deposits. J Basic Microbiol 56(3):254–262.
  • Ghosh S, Das AP. 2015. Modified titanium oxide (TiO2) nanocomposites and its array of applications: a review. Toxicol Environment Chemist. 97(5):491–514.
  • Ghosh S, Das AP. 2022. Role of microorganisms in extenuation of mining and industrial wastes. Geomicrobiol. 39(3-5):173–175.
  • Ghosh R, Datta M, Purkayastha RP. 2006. Intraspecific strains of Pythium aphanidermatum induced disease resistance in ginger and response of host proteins. Indian J Exp Biol 44(1):68–72.
  • Gnanesh BN, Tejaswi A, Arunakumar GS, Supriya M, Manojkumar HB, Tewary P. 2021. Molecular phylogeny, identification and pathogenicity of Rhizopus oryzae associated with root rot of mulberry in India. J Appl Microbiol 131(1):360–374.
  • Hartanti AT, Rahayu G, Hidayat I. 2015. Rhizopus species from fresh tempeh collected from several regions in Indonesia. HAYATI J Biosci 22(3):136–142.
  • Hassan O, Kim KM, Chang T. 2023. First report of Rhizopus oryzae causing rhizome soft rot of ovate-leaf atractylodes in South Korea. Plant Dis. 107(1):226.
  • Ilyas S, Palupi ER, Susila AD. 2016. Growth, yield and quality of ginger from produced through early senescence. Int J Appl Sci Technol 6:21–28.
  • Jha AK, Deka BC. 2008. Present status and prospects of ginger and turmeric in NE States, ICAR Research Complex for NEH Region, Umiam, Meghalaya. In Proceedings of the National Workshop on Zingiberaceous Spices Held at IISR, Calicut.
  • Khokhar I, Wang J, Jia Y, Yan Y. 2019. First report of rhizopus soft rot on tomato (Lycopersicon esculentum) caused by Rhizopus oryzae in China. Plant Dis 103(5):1041–1041.
  • Ko YT, Chipley JR. 1984. Role of biotin in the production of lysine by Brevibacterium lactofermentum. Microbios 40(161–162):161–171.
  • Laemmli UK. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227(5259):680–685.
  • Liansangpuii F, Panigrahi B, Paul JC. 2019. Assessment of meteorological drought by standardized precipitation index for coastal agroclimatic zones of Odisha. India. Indian J Soil Conserv 47(3):205–212.
  • Marhendraswari MD, Mondylaksita K, Millati R, Budhijanto W, Ferreira JA, Niklasson C, Taherzadeh MJ. 2020. Production of edible fungal (Rhizopus delemar CBS 145940) biomass from organo solv-pretreated oil palm empty fruit bunch (OPEFB) in submerged fermentation. IOP Conf Ser Mater Sci Eng 991(1):012041.
  • Mishra S, Swain S, Sahoo M, Mishra S, Das AP. 2021. Microbial colonization and degradation of microplastics in aquatic ecosystem: a review. Geomicrobiol J. 39(3-5):259–269.
  • Mishra S, Rout M, Das AP. 2021. Emerging microfiber pollution and its remediation. In Microbial Biotechnology and Environmental Issues/Remediation. Switzerlands: Springer.
  • Mishra S, Singh RP, Rout PK, Das AP. 2022. Membrane bioreactor (MBRa) as an advanced wastewater treatment technology for removal of synthetic microplastics. In: Shah M, Rodriguez-Couto S, Biswas J, editors. Development in Wastewater Treatment Research and Processes. Amsterdam, Netherlands: Elsevier, p45–60.
  • Mizunaga T, Kuraishi H, Aida K. 1975. Mechanism of unbalanced growth and death of biotin-deficient yeast cells in the presence of aspartic acid. J Gen Appl Microbiol 21(5):305–316.
  • Mohanty S, Ghosh S, Nayak S, Das AP. 2017. Isolation, identification and screening of manganese solubilizing fungi from low-grade manganese ore deposits. Geomicrobiol J 34(4):309–316.
  • Mohapatra D, Rath SK, Mohapatra PK. 2022. Soil fungi for bioremediation of pesticide toxicants: a perspective. Geomicrobiol J 39(3–5):352–372.
  • Montgomery HJ, Monreal CM, Young JC, Seifert KA. 2000. Determinination of soil fungal biomass from soil ergosterol analyses. Soil Biol Biochem 32(8–9):0–1217.
  • Naika J, Singh KK, Kadam KL, Naik U. 2019. Determine the trend of the extreme rainfall events over Odisha state in India. J Pharmacogn Phytochem 8(4):3514–3523.
  • Odoni DI, Tamayo-Ramos JA, Sloothaak J, Van Heck RGA, Martins dos Santos VAP, de Graaff LH, Suarez-Diez M, Schaap PJ. 2017. Comparative proteomics of Rhizopus delemar ATCC 20344 unravels the role of amino acid catabolism in fumarate accumulation. Peer J 5:e3133.
  • Panda D, Behera AK, Padhan B, Nayak JK. 2020. Chemical profiling of selected plants of zingiberaceae used in ethnomedicine of Koraput. India. J Stress Physiol Biochem 16(1):50–60.
  • Panda D, Palita SK. 2021. Potential of underutilized wild crops in Koraput, Odisha, India for improving nutritional security and promoting climate resilience. Current Sci. 120(6):989–996.
  • Parija W, Prabhakar PK. 1995. Evaluation of lacto-phenol cotton blue for wet mount preparation of feces. J Clin Microbiol. 33(4):1019–1021.
  • Pathania S, Sharma N, Handa S. 2018. Utilization of horticultural waste (Apple Pomace) for multiple carbohydrase production from Rhizopus delemar F2 under solid state fermentation. J Genet Eng Biotechnol 16(1):181–189.
  • Petruzzello M. 2016. Nov. Rhizopus. Ency Britannica. Available at https://www.britannica.com/science/Rhizopus.
  • Premalatha K, Kalra A. 2013. Molecular phylogenetic identification of endophytic fungi isolated from resinous and healthy wood of Aquilaria malaccensis, a red listed and highly exploited medicinal tree. Fungal Ecol 6(3):205–211.
  • Roa Engel CA, Straathof AJJ, Zijlmans TW, van Gulik WM, van der Wielen LAM. 2008. Fumaric acid production by fermentation. Appl Microbiol Biotechnol 78(3):379–389.
  • Raut S, Sen SK, Satpathy S, Pattnaik D. 2013. An ethnobotanical survey of medicinal plants in Semiliguda of Koraput district, Odisha, India. Res J Recent Sci 2(8):20–30.
  • Ray M, Dash S, Achary KG, Nayak S, Singh S. 2018. Development and evaluation of polyclonal antibodies for detection of Pythium aphanidermatum and Fusarium oxysporum in ginger. Food Agric Immunol 29(1):204–215.
  • Ray M, Dash S, Shahbazi S, Achary KG, Nayak S, Singh S. 2016. Development and validation of ELISA technique for early detection of rhizome rot in golden spice turmeric from different agroclimatic zones. LWT-Food Sci Technol 66:546–552.
  • Sahoo BB, Senapati N, Acharya P, Nayak L, Behera BR, Dalei BB, Meena MK. 2017. Management of rhizome rot of ginger in Eastern ghat high land zone of Odisha. Indian J Plant Prot 45(1):109–112.
  • Saitou N, Nei M. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406–425.
  • Sarkozi A. 2019. New Standards to Curb the Global Spread of Plant Pests and Diseases. Rome, Italy: Food and Agriculture Organization of the United Nations.
  • Shimada S, Kuraishi H, Aida K. 1978. The role of deoxyribonucleic acid synthesis in death caused by starvation for biotin in the yeast, Saccharomyces cerevisiae. J Gen Appl Microbiol 24(2):89–102.
  • Singh RP, Mishra S, Das AP. 2020. Synthetic microfibers: pollution toxicity and remediation. Chemosphere 257:127199.
  • Thanh NV, Nout MJR. 2002. Rhizopus oligosporus biomass, sporangiospore yield and viability as influenced by harvesting age and processing conditions. Food Microbiol 19(1):91–96.
  • Volesky B, Holan ZR. 1995. Biosorption of heavy metals. Biotechnol Prog 11(3):235–250.
  • Wang RY, Gao B, Chen SL, Ma J, Li XH, Xue CX. 2017. First report of Rhizopus oryzae causing soft rot on storage roots of sweet potato in China. Plant Dis 101(6):1039.
  • Zheng RY, Chen GQ, Huang H, Liu XY. 2007. A monograph of Rhizopus. Sydowia- Horn. 59:273–372.

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