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Chronobiology International
The Journal of Biological and Medical Rhythm Research
Volume 37, 2020 - Issue 7
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Original Articles

Development of model based on clock gene expression of human hair follicle cells to estimate circadian time

, , , , , , & ORCID Icon show all
Pages 993-1001 | Received 21 Apr 2020, Accepted 29 May 2020, Published online: 13 Jul 2020

References

  • Akashi M, Soma H, Yamamoto T, Tsugitomi A, Yamashita S, Yamamoto T, Nishida E, Yasuda A, Liao JK, Node K. 2010. Noninvasive method for assessing the human circadian clock using hair follicle cells. Proc Natl Acad Sci U S A. 107:15643–15648. doi: 10.1073/pnas.1003878107
  • Balsalobre A, Damiola F, Schibler U. 1998. A serum shock induces circadian gene expression in mammalian tissue culture cells. Cell. 93:929–937. doi: 10.1016/s0092-8674(00)81199-x
  • Bass J. 2012. Circadian topology of metabolism. Nature. 491:348–356. doi: 10.1038/nature11704
  • Brown SA, Kowalska E, Dallmann R. 2012. (Re)inventing the circadian feedback loop. Dev Cell. 22:477–487. doi: 10.1016/j.devcel.2012.02.007
  • Chen P, Kakan X, Zhang J. 2010. Altered circadian rhythm of the clock genes in fibrotic livers induced by carbon tetrachloride. FEBS Lett. 584:1597–1601. doi: 10.1016/j.febslet.2010.03.019
  • Cho CH, Moon JH, Yoon HK, Kang SG, Geum D, Son GH, Lim JM, Kim L, Lee EI, Lee HJ. 2016. Molecular circadian rhythm shift due to bright light exposure before bedtime is related to subthreshold bipolarity. Sci Rep. 6:31846. doi: 10.1038/srep31846
  • Cui M, Zheng M, Sun B, Wang Y, Ye L, Zhang X. 2015. A long noncoding RNA perturbs the circadian rhythm of hepatoma cells to facilitate hepatocarcinogenesis. Neoplasia. 17:79–88. doi: 10.1016/j.neo.2014.11.004
  • Dibner C, Schibler U, Albrecht U. 2010. The mammalian circadian timing system: organization and coordination of central and peripheral clocks. Annu Rev Physiol. 72:517–549. doi: 10.1146/annurev-physiol-021909-135821
  • Dijk DJ, Czeisler CA. 1995. Contribution of the circadian pacemaker and the sleep homeostat to sleep propensity, sleep structure, electroencephalographic slow waves, and sleep spindle activity in humans. J Neurosci. 15:3526–3538. doi: 10.1523/JNEUROSCI.15-05-03526.1995
  • Garau C, Aparicio S, Rial RV, Nicolau MC, Esteban S. 2006. Age related changes in the activity-rest circadian rhythms and c-fos expression of ring doves with aging. Effects of tryptophan intake. Exp Gerontol. 41:430–438. doi: 10.1016/j.exger.2006.02.003
  • Hiddinga AE, Beersma DG, Van den Hoofdakker RH. 1997. Endogenous and exogenous components in the circadian variation of core body temperature in humans. J Sleep Res. 6:156–163. doi: 10.1046/j.1365-2869.1997.00047.x
  • Khalsa SB, Jewett ME, Cajochen C, Czeisler CA. 2003. A phase response curve to single bright light pulses in human subjects. J Physiol. 549:945–952. doi: 10.1113/jphysiol.2003.040477
  • Ko CH, Takahashi JS. 2006. Molecular components of the mammalian circadian clock. Hum Mol Genet. 15:R271–277. doi: 10.1093/hmg/ddl207
  • Kooij JJ, Bijlenga D. 2013. The circadian rhythm in adult attention-deficit/hyperactivity disorder: current state of affairs. Expert Rev Neurother. 13:1107–1116. doi: 10.1586/14737175.2013.836301
  • Labrecque N, Cermakian N. 2015. Circadian clocks in the immune system. J Biol Rhythms. 30:277–290. doi: 10.1177/0748730415577723
  • Landgraf D, McCarthy MJ, Welsh DK. 2014. Circadian clock and stress interactions in the molecular biology of psychiatric disorders. Curr Psychiatry Rep. 16:483. doi: 10.1007/s11920-014-0483-7
  • Lunn RM, Blask DE, Coogan AN, Figueiro MG, Gorman MR, Hall JE, Hansen J, Nelson RJ, Panda S, Smolensky MH, et al. 2017. Health consequences of electric lighting practices in the modern world: A report on the National Toxicology Program’s workshop on shift work at night, artificial light at night, and circadian disruption. Sci Total Environ. 607-608:1073‐1084. doi: 10.1016/j.scitotenv.2017.07.056
  • Moon JH, Cho CH, Son GH, Geum D, Chung S, Kim H, Kang SG, Park YM, Yoon HK, Kim L, et al. 2016. Advanced circadian phase in mania and delayed circadian phase in mixed mania and depression returned to normal after treatment of bipolar disorder. EBioMedicine. 11:285–295. doi: 10.1016/j.ebiom.2016.08.019
  • Musiek ES, Xiong DD, Holtzman DM. 2015. Sleep, circadian rhythms, and the pathogenesis of Alzheimer disease. Exp Mol Med. 47:e148. doi: 10.1038/emm.2014.121
  • Nagoshi E, Saini C, Bauer C, Laroche T, Naef F, Schibler U. 2004. Circadian gene expression in individual fibroblasts: cell-autonomous and self-sustained oscillators pass time to daughter cells. Cell. 119:693–705. doi: 10.1016/j.cell.2004.11.015
  • Nota JA, Sharkey KM, Coles ME. 2015. Sleep, arousal, and circadian rhythms in adults with obsessive-compulsive disorder: a meta-analysis. Neurosci Biobehav Rev. 51:100–107. doi: 10.1016/j.neubiorev.2015.01.002
  • Relógio A, Westermark PO, Wallach T, Schellenberg K, Kramer A, Herzel H. 2011. Tuning the mammalian circadian clock: robust synergy of two loops. PLoS Comput Biol. 7:e1002309. doi: 10.1371/journal.pcbi.1002309
  • Shearman LP, Sriram S, Weaver DR, Maywood ES, Chaves I, Zheng B, Kume K, Lee CC, van der Horst GT, Hastings MH, et al. 2000. Interacting molecular loops in the mammalian circadian clock. Science. 288:1013–1019. doi: 10.1126/science.288.5468.1013
  • Smolensky MH, Hermida RC, Reinberg A, Sackett-Lundeen L, Portaluppi F. 2016. (2016) Circadian disruption: new clinical perspective of disease pathology and basis for chronotherapeutic intervention. Chronobiol Int. 33(8):1101‐1119. doi: 10.1080/07420528.2016.1184678
  • Sotak M, Sumova A, Pacha J. 2014. Cross-talk between the circadian clock and the cell cycle in cancer. Ann Med. 46:221–232. doi: 10.3109/07853890.2014.892296
  • Takahashi JS. 2004. Finding new clock components: past and future. J Biol Rhythms. 19:339–347. doi: 10.1177/0748730404269151
  • Virag JA, Lust RM. 2014. Circadian influences on myocardial infarction. Front Physiol. 5:422. doi: 10.3389/fphys.2014.00422
  • Welsh DK, Yoo SH, Liu AC, Takahashi JS, Kay SA. 2004. Bioluminescence imaging of individual fibroblasts reveals persistent, independently phased circadian rhythms of clock gene expression. Curr Biol. 14:2289–2295. doi: 10.1016/j.cub.2004.11.057
  • Yoo SH, Yamazaki S, Lowrey PL, Shimomura K, Ko CH, Buhr ED, Siepka SM, Hong HK, Oh WJ, Yoo OJ, et al. 2004. PERIOD2::LUCIFERASEreal-time reporting of circadian dynamics reveals persistent circadian oscillations in mouse peripheral tissues. Proc Natl Acad Sci U S A. 101:5339–5346. doi: 10.1073/pnas.0308709101
  • Zielinski T, Moore AM, Troup E, Halliday KJ, Millar AJ. 2014. Strengths and limitations of period estimation methods for circadian data. PLoS One. 9:e96462. doi: 10.1371/journal.pone.0096462
  • Zuber AM, Centeno G, Pradervand S, Nikolaeva S, Maquelin L, Cardinaux L, Bonny O, Firsov D. 2009. Molecular clock is involved in predictive circadian adjustment of renal function. Proc Natl Acad Sci U S A. 106:16523–16528. doi: 10.1073/pnas.0904890106

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