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DNA Sequence Volume 15, 2004 - Issue 2
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Original Article

Cloning and Overproduction of the rpoZ Gene Encoding an RNA Polymerase ω Subunit from a Deep-sea Piezophilic Shewanella violacea Strain DSS12

Hiroaki Kawano Faculty of Engineering, Department of Applied Chemistry, Toyo University, Kujirai, Kawagoe, 350-0852, Saitama, JapanCorrespondence[email protected]
,
Yasuo Suzaki Faculty of Engineering, Department of Applied Chemistry, Toyo University, Kujirai, Kawagoe, 350-0852, Saitama, Japan
,
Junko Fukuchi Japan Marine Science and Technology Center, The Deepstar Group, Natsushima-cho, Yokosuka, 237-0061, Kanagawa, Japan
,
Kaoru Nakasone Department of Biotechnology and Chemistry, School of Engineering, Kinki University, 1 Umenobe Takaya, Higashihiroshima, 739-2116, Hiroshima, Japan
,
Fumiyoshi Abe Japan Marine Science and Technology Center, The Deepstar Group, Natsushima-cho, Yokosuka, 237-0061, Kanagawa, Japan
,
Chiaki Kato Marine Ecosystems Research Department, Japan Marine Science and Technology Center, Natsushima-cho, Yokosuka, 237-0061, Kanagawa, Japan
,
Yasuhiko Yoshida Faculty of Engineering, Department of Applied Chemistry, Toyo University, Kujirai, Kawagoe, 350-0852, Saitama, Japan
,
Ron Usami Faculty of Engineering, Department of Applied Chemistry, Toyo University, Kujirai, Kawagoe, 350-0852, Saitama, Japan
&
Koki Horikoshi Japan Marine Science and Technology Center, The Deepstar Group, Natsushima-cho, Yokosuka, 237-0061, Kanagawa, Japan
 show all
Pages 118-122 | Received 14 Nov 2003, Published online: 11 Jul 2009

References

  • Gentry, D.R. and Burgess, R.R. (1989) “rpoZ, encoding the omega subunit of Escherichia coli RNA polymerase, is in the same operon as spoT”, J. Bacteriol. 171, 1271– 1277.
  • Gentry, D.R. and Burgess, R.R. (1990) “Overproduction and purification of the v subunit of Escherichia coli RNA polymerase”, Protein Expr. Purif. 1, 81– 86.
  • Igarashi, K., Fujita, N. and Ishihama, A. (1989) “Promoter selectivity of Escherichia coli RNA polymerase: omega factor is responsible for the ppGpp sensitivity”, Nucleic Acids Res. 17, 8755– 8765.
  • Ikegami, A., Nakasone, K., Fujita, M., Fujii, S., Kato, C., Usami, R. and Horikoshi, K. (2000) “Cloning and characterization of the gene encoding RNA polymerase sigma factor s54 of deep-sea piezophilic Shewanella violacea”, Biochim. Biophys. Acta 1491, 315– 320.
  • Kato, C., Sato, T. and Horikoshi, K. (1995) “Isolation and properties of barophilic and barotolerant bacteria from deep-sea mud samples”, Biodiv. Conserv. 4, 1– 9.
  • Kato, C., Ikegami, A., Smorawinska, M., Usami, R. and Horikoshi, K. (1997) “Structure of genes in a pressure-regulated operon and adjacent regions from a balotolerant bacterium strain DSS12”, J. Mar. Biotechnol. 5, 210– 218.
  • Nakasone, K., Ikegami, A., Kato, C., Usami, R. and Horikoshi, K. (1999) “Analysis of cis-elements upstream of the pressure-regulated operon in the deep-sea barophilic bacterium Shewanella violacea strain DSS12”, FEMS Microbiol. Lett. 176, 351– 356.
  • Nakasone, K., Ikegami, A., Fujii, S., Kato, C. and Horikoshi, K. (2000) “Isolation and piezoresponse of the rpoA gene encoding the RNA polymerase a subunit from the deep-sea piezophilic bacterium Shewanella violacea”, FEMS Microbiol. Lett. 193, 261– 268.
  • Nogi, Y., Kato, C. and Horikoshi, K. (1998) “Taxonomic studies of deep-sea barophilic Shewanella strains, and description of Shewanella violacea sp. nov.”, Arch. Microbiol. 170, 331– 338.
  • Yamada, M., Nakasone, K., Tamegai, H., Kato, C., Usami, R. and Horikoshi, K. (2000) “Pressure regulation of soluble cyto- chromes c in a deep-sea piezophilic bacterium Shewanella violacea”, J. Bacteriol. 182, 2945– 2952.
  • Yura, T. and Ishihama, A. (1979) “Genetics of bacterial RNA polymerases”, Annu. Rev. Genet. 13, 59– 97.

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