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Original

Characterization and expression of AmphiARF gene encoding a new member of ARF family from amphioxus Branchiostoma belcheri tsingtauense

Full Length Research Paper

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Pages 418-425 | Received 04 Apr 2005, Published online: 11 Jul 2009

References

  • Altschul SF, Madden TL, Schaffer AA, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 1997; 25: 3389–3402
  • Bateson W. The ancestry of the chordata. Quart J Micro Sci 1886; 26: 535–571
  • Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE. The protein data bank. Nucleic Acids Res 2000; 28: 235–242
  • Bobak DA, Bliziotes MM, Noda M, Tsai SC, Adamik R, Moss J. Mechanism of activation of cholera toxin by ADP-ribosylation factor (ARF): Both low- and high-affinity interactions of ARF with guanine nucleotides promote toxin activation. Biochemistry 1990; 29: 855–861
  • Bobak DA, Nightingale MS, Murtagh JJ, Price SR, Moss J, Vaughan M. Molecular cloning, characterization, and expression of human ADP-ribosylation factors: Two guanine nucleotide-dependent activators of cholera toxin. Proc Natl Acad Sci USA 1989; 86: 6101–6105
  • Boman AL, Kahn RA. Arf proteins: The membrane traffic police. Trends Biochem Sci 1995; 20: 147–150
  • Burland TG. DNASTAR's Lasergene sequence analysis software. Methods Mol Biol 2000; 132: 71–91
  • Felsenstein J. PHYLIP (Phylogeny Inference Package). Department of Genetics, University of Washington, Seattle 1993
  • Garstang W. The morphology of the tunicata, and its bearings on the phylogeny of the chordata. Quart J Micro Sci 1928; 72: 51–187
  • Holland RW, Garcia-Fernandez J. Hox genes, developmental evolution and the origin of vertebrates. Ontogenez 1996; 27: 273–279
  • Holland ND, Holland LZ. Amphioxus and the utility of molecular genetic data for hypothesizing body part homologies between distantly related animals. AMER Zool 1999; 39: 630–640
  • Kahn RA, Gilman AG. Purification of a protein cofactor required for ADP-ribosylation of the stimulatory regulatory component of adenylate cyclase by cholera toxin. J Biol Chem 1984; 259: 6228–6234
  • Kahn RA, Kern FG, Clark J, Gelmann EP, Rulka C. Human ADP-ribosylation factors: A functionally conserved family of GTP- binding proteins. J Biol Chem 1991; 266: 2606–2614
  • Kahn RA, Randazzo P, Serafini T, Weiss O, Ulka CR, Clark J, Amherdt M, Roller P, Orci L, Rothman JE. The amino terminus of ADP-ribosylation factor (ARF) is a critical determinant of ARF activities and is a potent and specific inhibitor of protein transport. J Biol Chem 1992; 267: 13039–13046
  • Kamath RS, Fraser AG, Dong Y, Poulin G, Durbin R, Gotta M, Kanapin A, Le-Bot N, Moreno S, Sohrmann M, Welchman DP, Zipperlen P, Ahringer J. Systematic functional analysis of the Caenorhabditis elegans genome using RNAi. Nature 2003; 421: 231–237
  • Lee CM, Haun RS, Tsai SC, Moss J, Vaughan M. Characterization of the human gene encoding ADP-ribosylation factor 1, a guanine nucleotide-binding activator of cholera toxin. J Biol Chem 1992; 267: 9028–9034
  • Lee FJS, Stevens LA, Hall LM, Murtagh JJ, Kao YL, Moss J, Vaughan M. Characterization of class I and class II ADP-ribosylation factor genes and proteins in Drosophila melanogaster. J Biol Chem 1994; 269: 21555–21560
  • Liu Z, Zhang S, Yuan J, Sawant MS, Wei J, Xu A. Molecular cloning and phylogenetic analysis of AmphiUbf80, a new member of ubiquitin family from the amphioxus Branchiostoma belcheri tsingtauense. Curr Sci 2002; 83: 50–53
  • Lodge JK, Johnson RL, Weinberg RA, Gordon JI. Comparison of myristoyl-CoA: Protein N-myristoyltransferases from three pathogenic fungi: Cryptococcus neoformans, Histoplasma capsulatum, and Candida albicans. J Biol Chem 1994; 269: 2996–3009
  • Monaco L, Murtagh JJ, Newman KB, Tsai SC, Moss J, Vaughan M. Selective amplification of an mRNA and related pseudogene for a human ADP-ribosylation factor, a guanine nucleotide-dependent protein activator of cholera toxin. Proc Natl Acad Sci USA 1990; 87: 2206–2210
  • Moss J, Vaughan M. Structure and function of ARF proteins: Activators of cholera toxin and critical components of intracellular vesicular transport processes. J Biol Chem 1995; 270: 12327–12330
  • Moss J, Vaughan M. Activation of toxin ADP-ribosyltransferases by eukaryotic ADP-ribosylation factors. Mol Cell Biochem 1999; 193: 153–157
  • Murtagh JJ, Lee FJS, Deak P, Hall LM, Monaco L, Lee CM, Stevens LA, Moss J, Vaughan M. Molecular characterization of a conserved, guanine nucleotide dependent ADP-ribosylation factor in Drosophila melanogaster. Biochemistry 1993; 32: 6011–6018
  • Price SR, Nightingale M, Tsai SC, Williamson KC, Adamik R, Chen HC, Moss J, Vaughan M. Guanine nucleotide-binding proteins that enhance choleragen ADP-ribosyltransferase activity: Nucleotide and deduced amino acid sequence of an ADP-ribosylation factor cDNA. Proc Natl Acad Sci USA 1988; 85: 5488–5491
  • Regad F, Bardet C, Tremousaygue D, Moisan A, Lescure B, Axelos M. cDNA cloning and expression of an arabidopsis GTP-binding protein of the ARF family. FEBS Lett 1993; 316: 133–136
  • Rehm BH. Bioinformatic tools for DNA/protein sequence analysis, functional assignment of genes and protein classification. Appl Microbiol Biotechnol 2001; 57: 579–592
  • Saitoh O, Oshima T, Agata K, Watanabe K, Nakata H. Molecular cloning of a novel ADP-ribosylation factor (ARF) expressed in planarians. Biochim Biophys Acta 1996; 1309: 205–210
  • Schleifer LS, Kahn RA, Hanski E, Northup JK, Sternweis PC, Gilman AG. Requirements for cholera toxin-dependent ADP-ribosylation of the purified regulatory component of adenylate cyclase. J Biol Chem 1982; 257: 20–23
  • Schwede T, Kopp J, Guex N, Peitsch MC. SWISS-MODEL: An automated protein homology-modeling server. Nucleic Acids Res 2003; 31: 3381–3385
  • Sewell JL, Kahn RA. Sequences of the bovine and yeast ADP-ribosylation factor and comparison to other GTP-binding proteins. Proc Natl Acad Sci USA 1988; 85: 4620–4624
  • Stokes MD, Holland ND. The lancelet: Also known as “amphioxus”, this curious creature has returned to the limelight as a player in the phylogenetic history of the vertebrates. American Scientist 1998; 86: 552–560
  • Tsuchiya M, Price SR, Tsai SC, Moss J, Vaughan M. Molecular identification of ADP-ribosylation factor mRNAs and their expression in mammalian cells. J Biol Chem 1991; 266: 2772–2777
  • Wada H, Satoh N. Details of the evolutionary history from invertebrates to vertebrates, as deduced from the sequences of 18S rDNA. Proc Natl Acad Sci USA 1994; 91: 1801–1804
  • Zhang SC, Yuan JD, Li HY. Amphioxus—model animal for insights into the origin and evolution of the vertebrates. Chin Bull Life Sci 2001; 13: 214–218, in Chinese with English abstract

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