Advanced search
Publication Cover
DNA Sequence Volume 19, 2008 - Issue 3
Journal homepage
64
Views
4
CrossRef citations to date
0
Altmetric
Original

The narQP genes for a two-component regulatory system from the deep-sea bacterium Shewanella violacea DSS12

Full Length Research Paper

Hideyuki Tamegai Department of Chemistry, College of Humanities and Sciences, Nihon University, Setagaya-ku, Tokyo, Japan
,
Sayaka Chikuma Department of Chemistry, College of Humanities and Sciences, Nihon University, Setagaya-ku, Tokyo, Japan
,
Masami Ishii Department of Chemistry, College of Humanities and Sciences, Nihon University, Setagaya-ku, Tokyo, Japan
,
Kaoru Nakasone Department of Biotechnology and Chemistry, School of Engineering, Kinki University, Higashihiroshima, Hiroshima, Japan
&
Chiaki Kato Extremobiosphere Research Center, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan
Pages 308-312 | Received 22 May 2007, Accepted 30 Jul 2007, Published online: 11 Jul 2009

References

  • Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res 1997; 25: 3389–3402
  • Baikalov I, Schröder I, Kaczor-Grzeskowiak M, Grzeskowiak K, Gunsalus RP, Dickerson RE. Structure of the Escherichia coli responce regulator NarL. Biochemistry 1996; 35: 11053–11061
  • Chikuma S, Kasahara R, Kato C, Tamegai H. Bacterial adaptation to high pressure: A respiratory system in the deep-sea bacterium Shewanella violacea DSS12. FEMS Microbiol Lett 2007; 267: 108–112
  • Cook GM, Membrillo-Hernández J, Poole RK. Transcriptional regulation of the cydDC operon, encoding a heterodimeric ABC transporter required for assembly of cytochromes c and bd in Escherichia coli K-12: Regulation by oxygen and alternative electron acceptors. J Bacteriol 1997; 179: 6525–6530
  • Darwin AJ, Li J, Stewart V. Analysis of nitrate regulatory protein NarL-binding sites in the fdnG and narG operon control regions of Escherichia coli K-12. Mol Microbiol 1996; 20: 621–632
  • Darwin AJ, Tyson KL, Busby SJW, Stewart V. Differential regulation by the homologous responce regulators NarL and NarP of Escherichia coli K-12 depends on DNA binding site arrangement. Mol Microbiol 1997; 25: 583–595
  • Kato C, Sato T, Horikoshi K. Isolation and properties of barophilic and barotolerant bacteria from deep-sea mud samples. Biodivers Conserv 1995; 4: 1–9
  • Kato C, Smorawinska M, Sato T, Horikoshi K. Analysis of a pressure-regulated operon from the barophilic bacterium strain DB6705. Biosci Biotechnol Biochem 1996a; 60: 166–168
  • Kato C, Tamegai H, Ikegami A, Usami R, Horikoshi K. Open reading frame 3 of the barotolerant bacterium strain DSS12 is complementary with cydD in Escherichia coli: cydD Functions are required for cell stability at high pressure. J Biochem 1996b; 120: 301–305
  • Laemmli UK. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970; 227: 680–685
  • Nakasone K, Yamada M, Qureshi MH, Kato C, Horikoshi K. Piezoresponse of the cyo-operon coding for quinol oxidase subunits in a deep-sea piezophilic bacterium, Shewanella violacea. Biosci Biotechnol Biochem 2001; 65: 690–693
  • Nogi Y, Kato C, Horikoshi K. Taxonomic studies of deep-sea barophilic Shewanella strains and description of Shewanella violacea sp. nov. Arch Microbiol 1998; 170: 331–338
  • Poole RK, Williams HD, Downie A, Gibson F. Mutations affecting the cytochrome d-containing oxidase complex of Escherichia coli K12: Identification and mapping of a fourth locus, cydD. J Gen Microbiol 1989; 135: 1865–1874
  • Poole RK, Hatch L, Cleeter MWJ, Gibson F, Cox GB, Wu G. Cytochrome bd biosynthesis in Escherichia coli: The sequences of the cydC and cydD genes suggest that they encode the components of an ABC membrane transporter. Mol Microbiol 1993; 10: 421–430
  • Poole RK, Gibson F, Wu G. The cydD gene product, component of a heterodimeric ABC transporter, is required for assembly of periplasmic cytochrome c and of cytochrome bd in Escherichia coli. FEMS Microbiol Lett 1994; 117: 217–224
  • Qureshi MH, Kato C, Horikoshi K. Purification of a ccb-type quinol oxidase specifically induced in a deep-sea barophilic bacterium, Shewanella sp. strain DB-172F. Extremophiles 1998a; 2: 93–99
  • Qureshi MH, Kato C, Horikoshi K. Purification of two pressure-regulated c-type cytochromes from a deep-sea bacterium, Shewanella sp. strain DB-172F. FEMS Microbiol Lett 1998b; 161: 301–309
  • Rabin RS, Stewart V. Dual responce regulators (NarL and NarP) interact with dual sensors (NarX and NarQ) to control nitrate- and nitrite-regulated gene expression in Escherichia coli K-12. J Bacteriol 1993; 175: 3259–3268
  • Sambrook J, Fritsch EF, Maniatis T. Molecular cloning: A laboratory manual2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor 1989
  • Tamegai H, Kato C, Horikoshi K. Pressure-regulated respiratory system in barotolerant bacterium, Shewanella sp. strain DSS12. J Biochem Mol Biol Biophys 1998; 1: 213–220
  • Tamegai H, Kawano H, Ishii A, Chikuma S, Nakasone K, Kato C. Pressure-regulated biosynthesis of cytochrome bd in piezo- and psychrophilic deep-sea bacterium Shewanella violacea DSS12. Extremophiles 2005; 9: 247–253
  • Yamada M, Nakasone K, Tamegai H, Kato C, Usami R, Horikoshi K. Pressure-regulation of soluble cytochromes c in a deep-sea piezophilic bacterium, Shewanella violacea. J Bacteriol 2000; 182: 2945–2952

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.