Mapping cynomolgus monkey MHC class I district on chromosome 6p13 using pooled cDNAs

References

• Anzai T, Shiina T, Kimura N, Yanagiya K, Kohara S, Shigenari A, Yamagata T, Kulski JK, Naruse TK, Fujimori Y, Fukuzumi Y, Yamazaki M, Tashiro H, Iwamoto C, Umehara Y, Imanishi T, Meyer A, Ikeo K, Gojobori T, Bahram S, Inoko H. Comparative sequencing of human and chimpanzee MHC class I regions unveils insertions/deletions as the major path to genomic divergence. Proc. Natl. Acad. Sci. USA. 2003; 100: 7708–7713
   PubMedGoogle Scholar
• Borrell M, Ponsa M, Egozcue J, Rubio A, Garcia M. Chromosome abnormalities in peripheral blood lymphocytes from Macaca fascicularis and Erythrocebus patas (Cercopithecidae, Catarrhini) after X-ray irradiation. Mutat. Res. 1998; 403: 185–198
   PubMedGoogle Scholar
• Chen DQ, Zhang CY. A simple and convenient method for gaining pure populations of lymphocytes at the first mitotic division in vitro. Mutat. Res. 1992; 282: 227–229
   PubMed Web of Science ®Google Scholar
• Chen WH, Wang XX, Lin W, He XW, Wu ZQ, Lin Y, Hu SN, Wang XN. Analysis of 10,000 ESTs from lymphocytes of the cynomolgus monkey to improve our understanding of its immune system. BMC Genomics 2006; 7: 82
   PubMedGoogle Scholar
• Cox LA, Mahaney MC, Vandeberg JL, Rogers J. A second-generation genetic linkage map of the baboon (Papio hamadryas) genome. Genomics 2006; 88: 274–281
   PubMedGoogle Scholar
• Daza-Vamenta R, Glusman G, Rowen L, Guthrie B, Geraghty DE. Genetic divergence of the rhesus macaque major histocompatibility complex. Genome Res. 2004; 14: 1501–1515
   Google Scholar
• Eder V, Ventura M, Ianigro M, Teti M, Rocchi M, Archidiacono N. Chromosome 6 phylogeny in primates and centromere repositioning. Mol. Biol. Evol. 2003; 20: 1506–1512
   PubMedGoogle Scholar
• Gordon D, Abajian C, Green P. Consed: a graphical tool for sequence finishing. Genome Res. 1998; 8: 195–202
   PubMed Web of Science ®Google Scholar
• Gustafson AL, Tallmadge RL, Ramlachan N, Miller D, Bird H, Antczak DF, Raudsepp T, Chowdhary BP, Skow LC. An ordered BAC contig map of the equine major histocompatibility complex. Cytogenet. Genome Res. 2003; 102: 189–195
   PubMedGoogle Scholar
• Huber I, Walter L, Wimmer R, Pasantes JJ, Gunther E, Schempp W. Cytogenetic mapping and orientation of the rhesus macaque MHC. Cytogenet. Genome Res. 2003; 103: 144–149
   PubMedGoogle Scholar
• Korenberg JR, Chen XH. Human cDNA mapping using a high-resolution R-banding technique and fluorescence in situ hybridization. Cytogenet. Cell Genet. 1995; 69: 196–200
   PubMedGoogle Scholar
• Krebs KC, Jin Z, Rudersdorf R, Hughes AL, O'Connor DH. Unusually high frequency MHC class I alleles in Mauritian origin cynomolgus macaques. J. Immunol. 2005; 175: 5230–5239
   PubMedGoogle Scholar
• Kulski JK, Anzai T, Shiina T, Inoko H. Rhesus macaque class I duplicon structures, organization, and evolution within the alpha block of the major histocompatibility complex. Mol. Biol. Evol. 2004; 21: 2079–2091
   PubMedGoogle Scholar
• Kulski JK, Shiina T, Anzai T, Kohara S, Inoko H. Comparative genomic analysis of the MHC: the evolution of class I duplication blocks, diversity and complexity from shark to man. Immunol. Rev. 2002; 190: 95–122
   PubMed Web of Science ®Google Scholar
• Murphy WJ, Agarwala R, Schaffer AA, Stephens R, Smith C, Jr, Crumpler NJ, David VA, O'Brien SJ. A rhesus macaque radiation hybrid map and comparative analysis with the human genome. Genomics 2005; 86: 383–395
   PubMedGoogle Scholar
• Osada N, Hida M, Kusuda J, Tanuma R, Iseki K, Hirata M, Suto Y, Hirai M, Terao K, Suzuki Y, Sugano S, Hashimoto K. Assignment of 118 novel cDNAs of cynomolgus monkey brain to human chromosomes. Gene 2001; 275: 31–37
   PubMedGoogle Scholar
• Ruiz-Herrera A, Garcia F, Azzalin C, Giulotto E, Egozcue J, Ponsa, Garcia M. Distribution of intrachromosomal telomeric sequences (ITS) on Macaca fascicularis (Primates) chromosomes and their implication for chromosome evolution. Hum. Genet. 2002; 110: 578–586
   PubMed Web of Science ®Google Scholar
• Ruiz-Herrera A, Ponsa M, Garcia F, Egozcue J, Garcia M. Fragile sites in human and Macaca fascicularis chromosomes are breakpoints in chromosome evolution. Chromosome Res. 2002; 10: 33–44
   PubMed Web of Science ®Google Scholar
• Scammell JG, Reynolds PD, Elkhalifa MY, Tucker JA, Moore CM. An EBV-transformed owl monkey B-lymphocyte cell line. In Vitro Cell. Dev. Biol. Anim. 1997; 33: 88–91
   PubMed Web of Science ®Google Scholar
• Stanyon R, Ardito G, Lamberti L, Bigatti P. The banded karyotypes of Macaca fuscata compared with Cercocebus aterrimus. Folia Primatol. (Basel) 1983; 41: 137–146
   PubMedGoogle Scholar
• Tapia-Paez I, O'Brien KP, Kost-Alimova M, Sahlen S, Kedra D, Bruder CE, Andersson B, Roe BA, Hu P, Imreh S, Blennow E, Dumanski JP. Fine mapping of the constitutional translocation t(11;22)(q23;q11). Hum. Genet. 2000; 106: 506–516
   PubMedGoogle Scholar
• Trowsdale J. ”Both man & bird & beast”: comparative organization of MHC genes. Immunogenetics 1995; 41: 1–17
   PubMed Web of Science ®Google Scholar
• Uda A, Tanabayashi K, Fujita O, Hotta A, Terao K, Yamada A. Identification of the MHC class I B locus in cynomolgus monkeys. Immunogenetics 2005; 57: 189–197
   PubMedGoogle Scholar
• Uda A, Tanabayashi K, Yamada YK, Akari H, Lee YJ, Mukai R, Terao K, Yamada A. Detection of 14 alleles derived from the MHC class I A locus in cynomolgus monkeys. Immunogenetics 2004; 56: 155–163
   PubMedGoogle Scholar
• Ventura M, Antonacci F, Cardone MF, Stanyon R, D'Addabbo P, Cellamare A, Sprague LJ, Eichler EE, Archidiacono N, Rocchi M. Evolutionary formation of new centromeres in macaque. Science 2007; 316: 243–246
   PubMed Web of Science ®Google Scholar
• Wienberg J, Stanyon R, Jauch A, Cremer T. Homologies in human and Macaca fuscata chromosomes revealed by in situ suppression hybridization with human chromosome specific DNA libraries. Chromosoma 1992; 101: 265–270
   PubMed Web of Science ®Google Scholar