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Mini Review

Sensing, Threading, Orienting, and Cutting Polymers with Rigid-Rod Pores

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Pages 461-472 | Published online: 10 Oct 2008

REFERENCES

  • Kumaki J, Yashima E, Bollot G, Mareda J, Litvinchuk S, Matile S. AFM snapshots of synthetic multifunctional pores with polyacetylene blockers: Pseudo-rotaxanes and template effects. Angew Chem Int Ed 2005; 44: 6154–6157
  • Das G, Onouchi H, Yashima E, Sakai N, Matile S. Binding of organic anions by synthetic supramolecular metallopores with internal Mg2+-aspartate complexes. ChemBioChem 2002; 3: 1089–1096
  • Yashima E, Maeda K, Nishimura T. Detection and amplification of chirality by helical polymers. Chem Eur J 2004; 5: 42–51
  • Yashima E, Matsushima T, Okamoto Y. Poly((4-carboxyphenyl)acetylene) as a probe for chirality assignment of amines by circular dichroism. J Am Chem Soc 1995; 117: 11596–11597
  • Sakai N, Mareda J, Matile S. Rigid-rod molecules in biomembrane models: From hydrogen-bonded chains to synthetic multifunctional pores. Acc Chem Res 2005; 38: 79–87
  • Sakai N, Matile S. Synthetic multifunctional pores: Lessons from rigid-rod β-barrels. Chem Commun 2003; 38: 2514–2523
  • Sakai N, Brennan K C, Weiss L A, Matile S. Toward biomimetic ion channels formed by rigid-rod molecules: Length-dependent ion transport activity of substituted oligo(p-phenylene)s. J Am Chem Soc 1997; 119: 8726–8727
  • Weiss L A, Sakai N, Ghebremariam B, Ni C, Matile S. Rigid rod-shaped polyols: Functional nonpeptide models for transmembrane proton channels. J Am Chem Soc 1997; 119: 12142–12149
  • Schwab P FH, Levin M D, Michl J. Molecular rods. 1. Simple axial rods. Chem Rev 1999; 99: 1863–1934
  • Sakai N, Majumdar N, Matile S. Self-assembled rigid-rod ionophores. J Am Chem Soc 1999; 121: 4294–4295
  • Talukdar P, Bollot G, Mareda J, Sakai N, Matile S. Synthetic ion channels with rigid-rod π-stack architecture that open in response to charge-transfer complex formation. J Am Chem Soc 2005; 127: 6528–6529
  • Litvinchuk S, Matile S. Blockage of rigid-rod β-barrel pores by rigid-rod α-helix mimics. Supramol Chem 2005; 17: 135–139
  • Baumeister B, Matile S. Rigid-rod β-barrels as lipocalin models: Probing confined space by carotenoid encapsulation. Chem Eur J 2000; 6: 1739–1749
  • Sordé N, Das G, Matile S. Enzyme screening with synthetic multifunctional pores: Focus on biopolymers. Proc Natl Acad Sci USA 2003; 100: 11964–11969
  • Sakai N, Baumeister B, Matile S. Transmembrane B-DNA. ChemBioChem 2000; 1: 123–125
  • Baumeister B, Matile S. Toward p-octiphenyl β-barrel RNases. Macromolecules 2002; 35: 1549–1555
  • Sordé N, Matile S. On sensitivity and selectivity of synthetic multifunctional pores as enzyme sensors: Discrimination between ATP and ADP and comparison with biological pores. Biopolymers 2004; 76: 55–65
  • Gorteau V, Perret F, Bollot G, Mareda J, Lazar A N, Coleman A W, Tran D H, Sakai N, Matile S. Synthetic multifunctional pores with external and internal active sites for ligand gating and noncompetitive blockage. J Am Chem Soc 2004; 126: 13592–13593
  • Das G, Talukdar P, Matile S. Fluorometric detection of enzyme activity with synthetic supramolecular pores. Science 2002; 298: 1600–1602
  • Litvinchuk S, Sordé N, Matile S. Sugar sensing with synthetic multifunctional pores. J Am Chem Soc 2005; 127: 9316–9317
  • Hector R S, Gin M S. Signal-triggered transmembrane transport through synthetic ion channels. Supramol Chem 2005; 17: 129–134
  • Matile S, Som A, Sordé Recent N. synthetic ion channels and pores. Tetrahedron 2004; 60: 6405–6435
  • Sisson A L, Shah M R, Bhosale S, Matile S. Synthetic ion channels and pores (2004–2005). Chem Soc Rev, in press
  • Mitchell K DD, Fyles T M. Ion channels and their models. Encyclopedia of Supramolecular Chemistry, J L Atwood, J W Steed. Marcel Dekker, New York 2004; 742–746
  • Koert U. Synthetic ion channels. Bioorg Med Chem 2004; 12: 1277–1350
  • Koert U, Al-Momani L, Pfeifer J R. Synthetic ion channels. Synthesis 2004; 8: 1129
  • Gokel G W, Mukhopadhyay A. Synthetic models of cation-conducting channels. Chem Soc Rev 2001; 30: 274–286
  • Scrimin P, Tecilla P. Model membranes: Developments in functional micelles and vesicles. Curr Opin Chem Biol 1999; 3: 730–735
  • Yang W Y, Ahn J H, Yoo Y S, Oh N K, Lee M. Supramolecular barrels from amphiphilic rigid-flexible macrocycles. Nat Mater 2005; 4: 399–402
  • Chen W H, Regen S L. Thermally gated liposomes. J Am Chem Soc 2005; 127: 6538–6539
  • Yoshii M, Yamamura M, Satake A, Kobuke Y. Supramolecular ion channels from a transmembrane bischolic acid derivative showing two discrete conductances. Org Biomol Chem 2004; 2: 2619–2623
  • Jeon Y J, Kim H, Jon S, Selvapalam N, Oh D H, Seo I, Park C S, Jung S R, Koh D S, Kim K. Artificial ion channel formed by cucurbit[n]uril derivatives with a carbonyl group fringed portal reminiscent of the selectivity filter of K+ channels. J Am Chem Soc 2004; 126: 15944–15945
  • Percec V, Dulcey A E, Balagurusamy V S, Miura Y, Smidrkal J, Peterca M, Nummelin S, Edlund U, Hudson S D, Heiney P A, Duan H, Magonov S N, Vinogradov S A. Self-assembly of amphiphilic dendritic dipeptides into helical pores. Nature 2004; 430: 764–768
  • Kaucher M S, Harrell W A, Davis J T. A unimolecular G-quadruplex that functions as a synthetic transmembrane Na+ transporter. J Am Chem Soc 2006; 128: 38–39
  • McNally B A, Koulov A V, Smith B D, Joos J B, Davis A P. A fluorescent assay for chloride transport: Identification of a synthetic anionophore with improved activity. Chem Commun 2005; 40: 1087–1089
  • Vandenburg Y R, Smith B D, Biron E, Voyer N. Membrane disruption ability of facially amphiphilic helical peptides. Chem Commun 2002; 37: 1694–1695
  • Sanderson J M, Yazdani S. The design, synthesis and characterisation of channel-forming peptides. Chem Commun 2002; 37: 1154–1155
  • Pérez C, Espínola C G, Foces-Foces C, Núñez-Coello P, Carrasco H, Martín J D. A synthetic hydroxy acid that shows tubular-shaped structure in solid-state and ionophoric activity in phospholipid bilayers. Org Lett 2000; 2: 1185–1188
  • Ronan D, Sordé N, Matile S. Blocker efflux through blocked pores. J Phys Org Chem 2004; 17: 978–982
  • Oomen C J, van Ulsen P, van Gelder P, Feijen M, Tommassen J, Gros P. Structure of the translocator domain of a bacterial autotransporter. EMBO J 2004; 23: 1257–1266
  • Doyle D A, Morais Cabral J, Pfuetzner R A, Kuo A, Gulbis J M, Cohen S L, Chait B T, MacKinnon R. The structure of the potassium channel: Molecular basis of K+ conduction and selectivity. Science 1998; 280: 69–77
  • Giese B, Biland A. Recent developments of charge injection and charge transfer in DNA. Chem Commun 2002; 37: 667–672
  • Deamer D W, Branton D. Characterization of nucleic acids by nanopore analysis. Acc Chem Res 2002; 35: 817–825
  • Som A, Matile S. Contributions of lipid bilayer hosts to structure and activity of multifunctional supramolecular guests. Chem Biodiv 2005; 2: 717–729
  • Baudry Y, Pasini D, Nishihara M, Sakai N, Matile S. The depth of molecular recognition: Voltage-sensitive blockage of synthetic multifunctional pores with refined architecture. Chem Commun 2005; 40: 4798–4800

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