The complete mitochondrial genome of the RR-B strain of swordtail (Xiphophorus helleri)

References

• Avise JC, Arnold J, Ball RM, Bermingham E, Lamb T, Neigel JE, Reeb CA, Saunders NC. Intraspecific phylogeography: The mitochondrial DNA bridge between population genetics and systematics. Annu Rev Ecol System 1987; 18: 489–522
   Google Scholar
• Bai JJ, Lao HH, Ye X, Jian Q, Wu SQ. Sequence and structure analysis of mitochondrial D-loop and tRNA-Thr and tRNA-Pro genes in Xiphophorus helleri. J Fish Sci China 2003; 10: 89–92
   Google Scholar
• Barnes D, Dowell L, Forest D, Parton A, Pavicevic P, Kazianis S. Characterization of XM, a novel Xiphophorus melanoma-derived cell line. Zebrafish 2006; 3(3)371–381
   Google Scholar
• Bazin E, Glémin S, Galtier N. Genetic diversity in animal population size does not influence mitochondrial. Science 2006; 312: 570–572
   PubMed Web of Science ®Google Scholar
• Beaugrand JP, Payette D, Goulet C. Conflict outcome in male green swordtail fish dyads (Xiphophorus Helleri): Interaction of body size, prior dominance/subordination experience, and prior residency. Behaviour 1996; 133: 303–319
   Web of Science ®Google Scholar
• Boore JL. Animal mitochondrial genomes. Nucleic Acids Res 1999; 27: 1767–1780
   PubMed Web of Science ®Google Scholar
• Cao XR, Shu FJ, Zhang XR, Bi CM, Li CJ, Hu J, Fang JY. Phylogenetic relationships of Elaphodus cephalophus and three Muntiacus species revealed by mitochondrial cytochrome b nucleotide sequence. Acta Zool Sin 2002; 48: 44–49
   Google Scholar
• Elson JL, Turnbull DM, Howell N. Comparative genomics and the evolution of human mitochondrial DNA: Assessing the effects of selection. Am J Hum Genet 2004; 74: 229–238
   PubMed Web of Science ®Google Scholar
• Huang ZB. 2006. Application of Xiphophorus helleri in the research of aquatic pharmaceutical clinical experiment. Ph.D. thesis, Nanjing Agricultural University, Nanjing, Jiangsu, China. p 127.
   Google Scholar
• Huang ZB, Wu SQ, Shi CB, Pan HJ, Li KB. Study on biological characteristics of swordtails, Xiphophorus helleri. J Fish Sci China 2000; 7: 107–109
   Google Scholar
• Johansen R, Knudsen G, Smith A. Acts and regulations concerning the care and use of fish in Norwegian research. Norwegian Reference Centre for Laboratory Animal Science and Alternatives, Norwegian School of Veterinary Science, Oslo 2005; 21
   Google Scholar
• Kato T. Role of mitochondrial DNA in calcium signaling abnormality in bipolar disorder. Cell Calcium 2008; 44: 92–102
   PubMed Web of Science ®Google Scholar
• Kazianis S, Nairn RS, Walter RB, Johnston DA, Kumar J, Trono D, Della-Coletta L, Gimenez-Conti I, Rains JD, Williams EL, Pino BM, Mamerow MM, Kochan KJ, Schartl M, Vielkind JR, Volff J-N, Woolcock B, Morizot DC. The genetic map of Xiphophorus fishes represented by 24 multipoint linkage groups. Zebrafish 2004; 1: 287–304
   Google Scholar
• Kraytsberg Y, Schwartz M, Brown TA, Ebralidse K, Kunz WS, Clayton DA, Vissing J, Khrapko K. Recombination of human mitochondrial DNA. Science 2004; 304: 981
   PubMed Web of Science ®Google Scholar
• Kwak HI, Bae MO, Lee MH, Lee YS, Lee BJ, Kang KS, Chae CH, Sung HJ, Shin JS, Kim JH, Mar WC, Sheen YY, Cho MH. Effects of monylphenol, bisphenol A, and their mixture on the viviparous swordtail fish (Xiphophorus helleri). Environ Toxicol Chem 2001; 20: 787–795
   PubMed Web of Science ®Google Scholar
• Lee JS, Miya M, Lee YS, Kim CG, Park EH, Aoki Y, Nishida M. The complete DNA sequence of the mitochondrial genome of the self-fertilizing fish Rivulus marmoratus (Cyprinodontiformes, Rivulidae) and the first description of duplication of a control region in fish. Gene 2001; 280: 1–7
   PubMed Web of Science ®Google Scholar
• Liu S, Qin Q, Xiao J, Lu W, Shen J, Li W, Liu J, Duan W, Zhang C, Tao M, Zhao R, Yan J, Liu Y. The formation of the polyploid hybrids from different subfamily fish crossings and its evolutionary significance. Genetics 2007; 176: 1023–1034
   Google Scholar
• Lockhart JP, Penny D, Meyer A. Testing the phylogeny of swordtail fishes using split decomposition and spectral analysis. J Mol Evol 1995; 41: 666–674
   Google Scholar
• Lowe TM, Eddy SR. tRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res 1997; 25: 955–964
   PubMed Web of Science ®Google Scholar
• Lu L, Shen YW. Acute toxicity of phenol, alkyl benzene, nitrobenzene and water sample to sword fish (Xiphophorus helleri) and rare minnow (Gobiocypris rarus). Res Environ Sci 2002; 15: 57–59
   Google Scholar
• Marcus JM, McCune AR. Ontogeny and phylogeny in the northern swordtail clade of Xiphophorus. Syst Biol 1999; 48: 491–522
   Google Scholar
• McBride HM, Neuspiel M, Wasiak S. Mitochondria: More than just a powerhouse. Curr Biol 2006; 16: 551–560
   PubMed Web of Science ®Google Scholar
• Meyer A, Salzburger W, Schartl M. Hybrid origin of a swordtail species (Teleostei: Xiphophorus clemenciae) driven by sexual selection. Mol Ecol 2005; 15: 721–730
   Google Scholar
• Miya M, Takeshima H, Endo H, Ishiguro NB, Inoue JG, Mukai T, Satoh TP, Yamaguchi M, Kawaguchi A, Mabuchi K, Shirai SM, Nishida M. Major patterns of higher teleostean phylogenies: A new perspective based on 100 complete mitochondrial DNA sequences. Mol Phylogenet Evol 2003; 26: 121–138
   PubMed Web of Science ®Google Scholar
• Ostrander GK, Bullock G, Bunton T. The laboratory fish. Handbook of laboratory animals. Academic Press, London 2000; 678
   Google Scholar
• Pang SX, Wei TL, Nai ZN, Yang WL. Studies of the toxicity of three pyethroid insecticides to swordtail fish and tilapia. Freshwater Fish 2004; 4: 15–16
   Google Scholar
• Sambrook J, Russell DW. Molecular cloning: A laboratory manual3rd ed. 2002; 467–469, Beijing: Science Press
   Google Scholar
• Tsaousis AD, Martin DP, Ladoukakis ED, Posada D, Zouros E. Widespread recombination in published animal mtDNA sequences. Mol Biol Evol 2005; 22: 925–933
   PubMed Web of Science ®Google Scholar
• Ujvari B, Dowton M, Madsen T. Mitochondrial DNA recombination in a free-ranging Australian lizard. Biol Lett 2007; 3: 189–192
   PubMed Web of Science ®Google Scholar
• Walter RB, Kazianis S. Xiphophorus interspecies hybrids as genetic models of induced neoplasia. ILAR J 2001; 42: 299–319
   PubMedGoogle Scholar
• Walter RB, Rains JD, Russell JE, Guerra TM, Daniels C, Johnston DA, Kumar J, Wheeler A, Kelnar K, Khanolkar VA, Williams EL, Hornecker JL, Hollek L, Mamerow MM, Pedroza A, Kazianis S. A microsatellite genetic linkage map for Xiphophorus. Genetics 2004; 168: 363–372
   Google Scholar
• Wang CF. 2004. The antagonistic action of selenium on the harm of antioxidant system and physiological damage in swordtail fish (Xiphophorus helleri) under the exposure of mercury, Masters thesis, South China Normal University, Guangzhou, Guangdong, China p 80
   Google Scholar
• Wang CF, Fang ZQ. Evaluation on acute toxicity and safety concentration of mercury and selenium to swordtail fish. Environ Sci Technol 2005; 28: 32–34
   Google Scholar
• Wang YQ, Zhou KY, Xu LS. Sequencing of Cyt b gene fragments and PCR identification of “Jinqian Baihuashe” Bungarus parvus and its adulterants. Acta Pharm Sin 1998; 33: 941–947
   Google Scholar
• Wang YQ, Zhou KY, Xu LS. The evolutionary relationships of several colubrid snakes suggested by sequences analysis of Cyt b gene fragment. Acta Zool Sin 1999; 45: 332–338
   Google Scholar
• Wolstenholme DR. Animal mitochondrial DNA: Structure and evolution. Int Rev Cytol 1992; 141: 173–216
   PubMed Web of Science ®Google Scholar
• Woolcock B, Kazianis S, Lucito R, Walter RB, Kallman KD, Morizot DC, Vielkind JR. Allele-specific marker generation and linkage mapping on the Xiphophorus sex chromosomes. Zebrafish 2006; 3: 23–37
   PubMed Web of Science ®Google Scholar
• Wu SQ, Huang ZB, Yu R. Approach for the application of Xiphophorus helleri as experiment animal. Proceedings of the Fourth Asian Fisheries Forum, 16–20 October 1995, Beijing, China, Z Yingqi. Huayu Center for Environmental Information Services, Beijing 1997; 101–107
   Google Scholar
• Wu SQ, Huang ZB, Shi CB, Pan HJ, Tan XC. Studies on swordtail as laboratory animal and its application. Lab Anim Sci Admin 2003; S1: 26–27
   Google Scholar
• Wu SQ, Huang ZB, Shi CB, Li KB, Pan HJ, Chang OQ. Aquatic laboratory animal: Swordtail fish (Xiphophorus helleri). China Agricultural Press, Beijing 2005; 6–7
   Google Scholar
• Xiao WH, Zhang YP. Genetics and evolution of mitochondrial DNA in fish. Acta Hydrobiol Sin 2000; 24: 384–391
   Google Scholar
• Xiong QM, Lu CP. Immune effect of Edwardasiella tarda on mice and Xiphophorus belleri. Chin J Vet Sci 2002; 22: 251–253
   Google Scholar
• Ye X, Bai JJ, Lao HH, Jian Q, Wu SQ. Sequence analysis of mitochondrial cytochrome b gene of swordtail fish (Xiphophorus helleri). Acta Lab Anim Sci Sin 2002; 10: 131–134
   Google Scholar