Cellulase activities in biomass conversion: measurement methods and comparison

References

• Baronus R, Ivanauskas E, Kulys J. 2003. Computer simulation of the response of amperometric biosensors in stirred and non stirred solution. Nonlinear Anal Model Control 8: 3–18.
   Google Scholar
• Bhatia Y, Mishra S, Bisaria VS. 2005. Purification and characterization of recombinant Escherichia coli-expressed Pichia etchellsii beta-glucosidase II with high hydrolytic activity on sophorose. Appl Microbiol Biotechnol 66: 527–535.
   PubMed Web of Science ®Google Scholar
• Breuil C, Mayers P, Saddler JN. 1986. Substrate conditions that influence the assays used for determining the beta-glucosidase activity of cellulolytic microorganisms. Biotechnol Bioeng 28: 1653–1656.
   PubMed Web of Science ®Google Scholar
• Caspi J, Irwin D, Lamed R, Li Y, Fierobe HP, Wilson DB, Bayer EA. 2008. Conversion of Thermobifida fusca free exoglucanases into cellulosomal components: comparative impact on cellulose-degrading activity. J Biotechnol 135: 351–357.
   PubMed Web of Science ®Google Scholar
• Chandra M, Kalra A, Sharma PK, Sangwan RS. 2009. Cellulase production by six Trichoderma spp. fermented on medicinal plant processings. J Ind Microbiol Biotechnol 36: 605–609.
   PubMed Web of Science ®Google Scholar
• Chaubey A, Malhotra BD. 2002. Mediated biosensors. Biosens Bioelectron 17: 441–456.
   PubMed Web of Science ®Google Scholar
• Courty PE, Pritsch K, Schloter M, Hartmann A, Garbaye J. 2005. Activity profiling of ectomycorrhiza communities in two forest soils using multiple enzymatic tests. New Phytol 167: 309–319.
   PubMed Web of Science ®Google Scholar
• Coward-Kelly G, Aiello-Mazzari C, Kim S, Granda C, Holtzapple M. 2003. Suggested improvements to the standard filter paper assay used to measure cellulase activity. Biotechnol Bioeng 82: 745–749.
   PubMed Web of Science ®Google Scholar
• Daroit DJ, Simonetti A, Hertz PF, Brandelli A. 2008. Purification and characterization of an extracellular beta-glucosidase from Monascus purpureus. J Microbiol Biotechnol 18: 933–941.
   PubMed Web of Science ®Google Scholar
• Dashtban M, Schraft H, Qin W. 2009. Fungal bioconversion of lignocellulosic residues; opportunities & perspectives. Int J Biol Sci 5: 578–595.
   PubMed Web of Science ®Google Scholar
• Decker SR, Adney WS, Jennings E, Vinzant TB, Himmel ME. 2003. Automated filter paper assay for determination of cellulase activity. Appl Biochem Biotechnol 105–108: 689–703.
   PubMed Web of Science ®Google Scholar
• Deshpande MV, Eriksson KE, Pettersson LG. 1984. An assay for selective determination of exo-1,4,-beta-glucanases in a mixture of cellulolytic enzymes. Anal Biochem 138: 481–487.
   PubMed Web of Science ®Google Scholar
• Eveleigh DE, Mandels M, Andreotti R, Roche C. 2009. Measurement of saccharifying cellulase. Biotechnol Biofuels 2: 21.
   Google Scholar
• Fujita Y, Takahashi S, Ueda M, Tanaka A, Okada H, Morikawa Y, Kawaguchi T, Arai M, Fukuda H, Kondo A. 2002. Direct and efficient production of ethanol from cellulosic material with a yeast strain displaying cellulolytic enzymes. Appl Environ Microbiol 68: 5136–5141.
   PubMed Web of Science ®Google Scholar
• Ghose TK. 1987. Measurement of cellulase activities. Pure Appl Chem 59: 257–268.
   Web of Science ®Google Scholar
• Gilman H. 1943. Organic Chemistry—Advanced Treatise. 2nd ed. Wiley: New York.
   Google Scholar
• Gopel W, Heiduschka P. 1995. Interface analysis in biosensor design. Biosens Bioelectron 10: 853–883.
   PubMed Web of Science ®Google Scholar
• Guignard R, Pilet P-E. 1976. Viscosimetric determination of cellulase activity: critical analyses. Plant Cell Physiol 17: 899–908.
   Web of Science ®Google Scholar
• Helbert W, Chanzy H, Husum TL, Schulein M, Ernst S. 2003. Fluorescent cellulose microfibrils as substrate for the detection of cellulase activity. Biomacromolecules 4: 481–487.
   PubMed Web of Science ®Google Scholar
• Hilden L, Eng L, Johansson G, Lindqvist SE, Pettersson G. 2001. An amperometric cellobiose dehydrogenase-based biosensor can be used for measurement of cellulase activity. Anal Biochem 290: 245–250.
   PubMed Web of Science ®Google Scholar
• Holtzapple M, Cognata M, Shu Y, Hendrickson C. 1990. Inhibition of Trichoderma reesei cellulase by sugars and solvents. Biotechnol Bioeng 36: 275–287.
   PubMed Web of Science ®Google Scholar
• Hu G, Heitmann JA, Rojas OJ. 2009. Quantification of cellulase activity using the quartz crystal microbalance technique. Anal Chem 81: 1872–1880.
   PubMed Web of Science ®Google Scholar
• Huang JS, Tang J. 1976. Sensitive assay for cellulase and dextranase. Anal Biochem 73: 369–377.
   PubMed Web of Science ®Google Scholar
• Joo AR, Jeya M, Lee KM, Sim WI, Kim JS, Kim IW, Kim YS, Oh DK, Gunasekaran P, Lee JK. 2009. Purification and characterization of a beta-1,4-glucosidase from a newly isolated strain of Fomitopsis pinicola. Appl Microbiol Biotechnol 83: 285–294.
   PubMed Web of Science ®Google Scholar
• Karnchanatat A, Petsom A, Sangvanich P, Piaphukiew J, Whalley AJ, Reynolds CD, Sihanonth P. 2007. Purification and biochemical characterization of an extracellular beta-glucosidase from the wood-decaying fungus Daldinia eschscholzii (Ehrenb.:Fr.) Rehm. FEMS Microbiol Lett 270: 162–170.
   PubMed Web of Science ®Google Scholar
• Kasana RC, Salwan R, Dhar H, Dutt S, Gulati A. 2008. A rapid and easy method for the detection of microbial cellulases on agar plates using gram’s iodine. Curr Microbiol 57: 503–507.
   PubMed Web of Science ®Google Scholar
• King BC, Donnelly MK, Bergstrom GC, Walker LP, Gibson DM. 2009. An optimized microplate assay system for quantitative evaluation of plant cell wall-degrading enzyme activity of fungal culture extracts. Biotechnol Bioeng 102: 1033–1044.
   PubMed Web of Science ®Google Scholar
• Kohring S, Wiegel J, Mayer F. 1990. Subunit composition and glycosidic activities of the cellulase complex from Clostridium thermocellum JW20. Appl Environ Microbiol 56: 3798–3804.
   PubMed Web of Science ®Google Scholar
• Korotkova OG, Semenova MV, Morozova VV, Zorov IN, Sokolova LM, Bubnova TM, Okunev ON, Sinitsyn AP. 2009. Isolation and properties of fungal beta-glucosidases. Biochemistry (Mosc) 74: 569–577.
   PubMed Web of Science ®Google Scholar
• Kubicek CP. 1982. Beta-glucosidase excretion by Trichoderma pseudokoningii: correlation with cell wall bound beta-1.3-glucanase activities. Arch Microbiol 132: 349–354.
   PubMed Web of Science ®Google Scholar
• Liu W, Hong J, Bevan DR, Zhang Y-HP. 2009. Fast identification of thermostable beta-glucosidase mutants on cellobiose by a novel combinatorial selection/screening approach. Biotechnol Bioeng 103: 1087–1094.
   PubMed Web of Science ®Google Scholar
• Maki M, Leung KT, Qin W. 2009. The prospects of cellulase-producing bacteria for the bioconversion of lignocellulosic biomass. Int J Biol Sci 5: 500–516.
   PubMed Web of Science ®Google Scholar
• Mandels M, Andreotti R, Roche C. 1976. Measurement of saccharifying cellulase. Biotechnol Bioeng Symp 21–33.
   PubMedGoogle Scholar
• McCarthy JK, Uzelac A, Davis DF, Eveleigh DE. 2004. Improved catalytic efficiency and active site modification of 1,4-beta-d-glucan glucohydrolase A from Thermotoga neapolitana by directed evolution. J Biol Chem 279: 11495–11502.
   PubMed Web of Science ®Google Scholar
• Miller GL. 1959. Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal Chem 31: 426–428.
   Web of Science ®Google Scholar
• Murray P, Aro N, Collins C, Grassick A, Penttila M, Saloheimo M, Tuohy M. 2004. Expression in Trichoderma reesei and characterisation of a thermostable family 3 beta-glucosidase from the moderately thermophilic fungus Talaromyces emersonii. Protein Expr Purif 38: 248–257.
   PubMed Web of Science ®Google Scholar
• Nelson N. 1944. A photometric adaptation of the Somogyi method for the determination of glucose. J Biol Chem 153: 375–380.
   Google Scholar
• Nordmark TS, Bakalinsky A, Penner MH. 2007. Measuring cellulase activity: application of the filter paper assay to low-activity enzyme preparations. Appl Biochem Biotechnol 137–140: 131–139.
   PubMed Web of Science ®Google Scholar
• Schwald W, Chan M, Breuil C, Saddler JN. 1988. Comparison of HPLC and colorimetric methods for measuring cellulolytic activity. Appl Microbiol Biotechnol 28: 398–403.
   Web of Science ®Google Scholar
• Sharrock KR. 1988. Cellulase assay methods: a review. J Biochem Biophys Methods 17: 81–105.
   PubMedGoogle Scholar
• Somogyi M. 1952. Notes on sugar determination. J Biol Chem 195: 19–23.
   PubMed Web of Science ®Google Scholar
• Ten LN, Im WT, Kim MK, Kang MS, Lee ST. 2004. Development of a plate technique for screening of polysaccharide-degrading microorganisms by using a mixture of insoluble chromogenic substrates. J Microbiol Methods 56: 375–382.
   PubMed Web of Science ®Google Scholar
• Trinder P. 1969. Determination of blood glucose using 4-amino phenazone as oxygen acceptor. J Clin Pathol 22: 246.
   PubMed Web of Science ®Google Scholar
• Tsukada T, Igarashi K, Fushinobu S, Samejima M. 2008. Role of subsite +1 residues in pH dependence and catalytic activity of the glycoside hydrolase family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium. Biotechnol Bioeng 99: 1295–1302.
   PubMed Web of Science ®Google Scholar
• van Tilbeurgh H, Claeyssens M, de Bruyne CK. 1982. The use of 4-methylumbelliferyl and other chromophoric glycosides in the study of cellulolytic enzymes. FEBS Lett 149: 152–156.
   Web of Science ®Google Scholar
• van Tilbeurgh H, Pettersson G, Bhikabhai R, De Boeck H, Claeyssens M. 1985. Studies of the cellulolytic system of Trichoderma reesei QM 9414. Reaction specificity and thermodynamics of interactions of small substrates and ligands with the 1,4-beta-glucan cellobiohydrolase II. Eur J Biochem 148: 329–334.
   PubMedGoogle Scholar
• Wood TM, Bhat KM. 1988. Methods for measuring cellulase activities. Methods Enzymol 160: 87–117.
   Web of Science ®Google Scholar
• Wu B, Gao PJ, Zhao Y. 2006. A new approach to measurement of saccharifying capacities of crude cellulase. BioResources 1: 189–200.
   Web of Science ®Google Scholar
• Xiao Z, Storms R, Tsang A. 2004. Microplate-based filter paper assay to measure total cellulase activity. Biotechnol Bioeng 88: 832–837.
   PubMed Web of Science ®Google Scholar
• Yang S, Jiang Z, Yan Q, Zhu H. 2008. Characterization of a thermostable extracellular beta-glucosidase with activities of exoglucanase and transglycosylation from Paecilomyces thermophila. J Agric Food Chem 56: 602–608.
   PubMed Web of Science ®Google Scholar
• Yoon JJ, Kim KY, Cha CJ. 2008. Purification and characterization of thermostable beta-glucosidase from the brown-rot basidiomycete Fomitopsis palustris grown on microcrystalline cellulose. J Microbiol 46: 51–55.
   PubMed Web of Science ®Google Scholar
• Zhang Y-HP, Himmel ME, Mielenz JR. 2006. Outlook for cellulase improvement: screening and selection strategies. Biotechnol Adv 24: 452–481.
   PubMed Web of Science ®Google Scholar
• Zhang Y-HP, Hong J, Ye X. 2009. Cellulase assays. Methods Mol Biol 581: 213–231.
   PubMedGoogle Scholar