Daily rhythms of lipid metabolic gene expression in zebra fish liver: Response to light/dark and feeding cycles

REFERENCES

• Akhtar R, Reddy A, Maywood E, et al. (2002). Circadian cycling of the mouse liver transcriptome, as revealed by cDNA microarray, is driven by the suprachiasmatic nucleus. Curr Biol. 12:540–50
   PubMed Web of Science ®Google Scholar
• Alila-Johansson A, Eriksson L, Soveri, T, Laakso M. (2004). Daily and annual variations of free fatty acid, glycerol and leptin plasma concentrations in goats (Capra hircus) under different photoperiods. Comp Biochem Phys A. 138:119–31
   PubMed Web of Science ®Google Scholar
• Aranda A, Madrid JA, Sanchez-Vazquez FJ. (2001). Influence of light on feeding anticipatory activity in goldfish. J Biol Rhythms. 16:50–57
   PubMed Web of Science ®Google Scholar
• Arble DM, Bass J, Laposky AD, et al. (2009). Circadian timing of food intake contributes to weight gain. Obesity. 17:2100–2
   PubMed Web of Science ®Google Scholar
• Azzaydi M, Rubio VC, Martinez-Lopez FJ, et al. (2007). Effect of restricted feeding schedule on seasonal shifting of daily demand-feeding pattern and food anticipatory activity in European sea bass (Dicentrarchus Labrax L.). Chronobiol Int. 24:859–74
   PubMed Web of Science ®Google Scholar
• Bass J, Takahashi JS. (2010). Circadian integration of metabolism and energetics. Science. 330:1349–54
   PubMed Web of Science ®Google Scholar
• Bertolucci C, Fazio F, Piccione G. (2008). Daily rhythms of serum lipids in dogs: Influences of lighting and fasting cycles. Compar Med. 58:485–9
   PubMed Web of Science ®Google Scholar
• Betancor MB, McStay E, Minghetti M, et al. (2014). Daily rhythms in expression of genes of hepatic lipid metabolism in Atlantic Salmon (Salmo salar L.). PLoS One. 9:e106739
   PubMed Web of Science ®Google Scholar
• Bitman J, Wood DL, Lefcourt AM. (1990). Rhythms in cholesterol, cholesteryl esters, free fatty-acids and triglycerides in blood of lactating dairy-cows. J Dairy sci. 73:948–55
   PubMed Web of Science ®Google Scholar
• Blum I, Waddington LE, Rodrigues T, Abizaid A. (2012). Isolating neural correlates of the pacemaker for food anticipation. PLoS One. 7:36117
   PubMed Web of Science ®Google Scholar
• Bolliet V, Cheewasedtham C, Houlihan D, et al. (2000). Effect of feeding time on digestibility, growth performance and protein metabolism in the rainbow trout Oncorhynchus mykiss: interactions with dietary fat levels. Aquat Living Resour. 13:107–13
   Web of Science ®Google Scholar
• Challet E, Mendoza J, Dardente H, Pevet P. (2009). Neurogenetics of food anticipation. Eur J Neurosci. 30:1676–87
   PubMed Web of Science ®Google Scholar
• Comperatore C, Stephan F. (1987). Entrainment of duodenal activity to periodic feeding. J Biol. Rhythms. 2:227–42
   PubMedGoogle Scholar
• Damiola F, Le Minh N, Preitner N, et al. (2000). Restricted feeding uncouples circadian oscillators in peripheral tissues from the central pacemaker in the suprachiasmatic nucleus. Gene Dev. 14:2950–61
   PubMed Web of Science ®Google Scholar
• Davidson A. (2009). Lesion studies targeting food-anticipatory activity. Eur J Neurosci. 30:1658–64
   PubMed Web of Science ®Google Scholar
• Del Pozo A, Sanchez-Ferez JA, Sanchez-Vazquez FJ. (2011). Circadian rhythms of self-feeding and locomotor activity in zebrafish (Danio rerio). Chronobiol Int. 28:39–47
   PubMed Web of Science ®Google Scholar
• Dibner C, Schibler U, Albrecht U. (2010). The mammalian circadian timing system: Organization and coordination of central and peripheral clocks. Annu. Rev. Physiol. 72:517–49
   PubMed Web of Science ®Google Scholar
• Eckel-Mahan K, Patel V, de Mateo S, et al. (2013). Reprogramming of the circadian clock by nutritional challenge. Cell. 155:1464–78
   PubMed Web of Science ®Google Scholar
• Eckel-Mahan K, Patel V, Mohney R, et al. (2012). Coordination of the transcriptome and metabolome by the circadian clock. Proc Natl Acad Sci USA. 109:5541–6
   PubMed Web of Science ®Google Scholar
• Escobar C, Diaz-Munoz M, Encinas F, Aguilar-Roblero R. (1998). Persistence of metabolic rhythmicity during fasting and its entrainment by restricted feeding schedules in rats. Am J Physiol Reg I. 274:1309–16
   PubMed Web of Science ®Google Scholar
• Feliciano A, Vivas Y, De Pedro N, et al. (2011). Feeding time synchronizes clock gene rhythmic expression in brain and liver of goldfish (Carassius auratus). J. Biol. Rhythms. 26:24–33
   PubMed Web of Science ®Google Scholar
• Garaulet M, Gomez-Abellan P. (2014). Timing of food intake and obesity: A novel association. Physiol Behav. 134:44–50
   PubMed Web of Science ®Google Scholar
• Gerstner JR, Lyons LC, Wright KP, et al. (2009). Cycling behavior and memory formation. J. Neurosci. 29:12824–30
   PubMed Web of Science ®Google Scholar
• Grimaldi B, Bellet MM, Katada S, et al. (2010). PER2 controls lipid metabolism by direct regulation of PPARγ. Cell Metab. 12:509–20
   PubMed Web of Science ®Google Scholar
• Hara R, Wan KK, Wakamatsu H, et al. (2001). Restricted feeding entrains liver clock without participation of the suprachiasmatic nucleus. Genes Cells. 6:269–78
   PubMed Web of Science ®Google Scholar
• Horton JD, Goldstein JL, Brown MS. (2002). SREBPs: Activators of the complete program of cholesterol and fatty acid synthesis in the liver. J Clin Invest. 109:1125–31
   PubMed Web of Science ®Google Scholar
• Hughes ME, DiTacchio L, Hayes KR, et al. (2009). Harmonics of circadian gene transcription in mammals. PLoS Genet. 5:e1000442
   PubMed Web of Science ®Google Scholar
• Janich P, Meng QJ, Benitah SA. (2014). Circadian control of tissue homeostasis and adult stem cells. Curr Opin Cell Biol. 31:8–15
   PubMed Web of Science ®Google Scholar
• Jouffe C, Cretenet G, Symul L, et al. (2013). The circadian clock coordinates ribosome biogenesis. PLoS Biol. 11:e1001455
   PubMed Web of Science ®Google Scholar
• Kornmann B, Schaad, O, Reinke H, et al. (2007). Regulation of circadian gene expression in liver by systemic signals and hepatocyte oscillators. Cold Spring Harbor Symp Quant Biol. 72:319–30
   PubMedGoogle Scholar
• Laffitte BA, Chao LC, Li J, et al. (2003). Activation of liver X receptor improves glucose tolerance through coordinate regulation of glucose metabolism in liver and adipose tissue. Proc Natl Acad Sci USA. 100:5419–24
   PubMed Web of Science ®Google Scholar
• Lal B, Singh HN, Singh TP, Pati AK. (1999). Diurnal and infradian rhythms in lipid parameters of Indian catfish, Heteropneustes fossilis. Biol Rhythm Res. 30:371–82
   Web of Science ®Google Scholar
• Livak KJ, Schmittgen TD. (2001). Analysis of relative gene expression data using real-time quantitative PCR and the 2(T)(-Delta Delta C) method. Methods. 25:402–8
   PubMed Web of Science ®Google Scholar
• Lopez-Olmeda JF, Tartaglione EV, de la Iglesia HO, Sanchez-Vazquez FJ. (2010). Feeding entrainment of food-anticipatory activity and per1 expression in the brain and liver of zebrafish under different lighting and feeding conditions. Chronobiol Int. 27:1380–400
   PubMed Web of Science ®Google Scholar
• Masri S, Sassone-Corsi P. (2010). Plasticity and specificity of the circadian epigenome. Nat Neurosci. 13:1324–9
   PubMed Web of Science ®Google Scholar
• Mauvoisin D, Wang J, Jouffe C, et al. (2014). Circadian clock-dependent and independent rhythmic proteomes implement distinct diurnal functions in mouse liver. Proc Natl Acad Sci USA. 111:167–72
   PubMed Web of Science ®Google Scholar
• Menet JS, Rosbash M. (2011). When brain clocks lose track of time: Cause or consequence of neuropsychiatric disorders. Curr Opin Neurobiol. 21:849–57
   PubMed Web of Science ®Google Scholar
• Mistlberger RE. (2009). Food-anticipatory circadian rhythms: concepts and methods. Eur J Neurosci. 30:1718–29
   PubMed Web of Science ®Google Scholar
• Mitro N, Mak PA, Vargas L, et al. (2007). The nuclear receptor LXR is a glucose sensor. Nature. 445:219–23
   PubMed Web of Science ®Google Scholar
• Montoya A, López-Olmeda JF, Garayzar A, Sánchez-Vázquez FJ. (2010a). Synchronization of daily rhythms of locomotor activity and plasma glucose, cortisol and thyroid hormones to feeding in Gilthead seabream (Sparus aurata) under a light-dark cycle. Physiol Behav. 101:101–7
   PubMed Web of Science ®Google Scholar
• Montoya A, Lopez-Olmeda JF, Yufera M, et al. (2010b). Feeding time synchronises daily rhythms of behaviour and digestive physiology in gilthead seabream (Sparus aurata). Aquaculture. 306:315–21
   Web of Science ®Google Scholar
• Panda S, Antoch MP, Miller BH, et al. (2002a). Coordinated transcription of key pathways in the mouse by the circadian clock. Cell. 109:307–20
   PubMed Web of Science ®Google Scholar
• Panda S, Hogenesch JB, Kay SA. (2002b). Circadian rhythms from flies to human. Nature. 417:329–35
   PubMed Web of Science ®Google Scholar
• Paredes JF, Vera LM, Martinez-Lopez FJ, et al. (2014). Circadian rhythms of gene expression of lipid metabolism in Gilthead Sea bream liver: Synchronisation to light and feeding time. Chronobiol Int. 31:613–26
   PubMed Web of Science ®Google Scholar
• Peek C, Affinati AH, Ramsey KM, et al. (2013). Circadian clock NAD+ cycle drives mitochondrial oxidative metabolism in mice. Science. 342:1243417
   PubMed Web of Science ®Google Scholar
• Pendergast J, Branecky K, Yang W, et al. (2013). High-fat diet acutely affects circadian organization and eating behavior. Eur J Neurosci. 37:1350–6
   PubMed Web of Science ®Google Scholar
• Piccinetti CC, Migliarini B, Olivotto I, et al. (2013). Melatonin and peripheral circuitries: Insights on appetite and metabolism in Danio rerio. Zebrafish. 10:275–82
   PubMed Web of Science ®Google Scholar
• Piccione G, Caola G, Refinetti R. (2003). Circadian rhythms of body temperature and liver function in fed and food-deprived goats. Comp Biochem Phys A. 134:563–72
   PubMed Web of Science ®Google Scholar
• Portaluppi F, Smolensky MH, Touitou Y. (2010). Ethics and methods for biological rhythm research on animals and human beings. Chronobiol Int. 27:1911–29
   PubMed Web of Science ®Google Scholar
• Rensing L, Ruoff P. (2002). Temperature effect on entrainment, phase shifting, and amplitude of circadian clocks and its molecular bases. Chronobiol Int. 19:807–64
   PubMed Web of Science ®Google Scholar
• Repa JJ, Liang G, Ou J, et al. (2000). Regulation of mouse sterol regulatory element-binding protein-1c gene (SREBP-1c) by oxysterol receptors, LXRα and LXRβ. Gene Dev. 14:2819–30
   PubMed Web of Science ®Google Scholar
• Rivera-Zavala JB, Báez-Ruiz A, Díaz-Muñoz M. (2011). Changes in the 24 h rhythmicity of liver PPARs and peroxisomal markers when feeding is restricted to two daytime hours. PPAR Res. 11:261584
   Google Scholar
• Robles M, Cox J, Mann M. (2014). In-vivo quantitative proteomics reveals a key contribution of post-transcriptional mechanisms to the circadian regulation of liver metabolism. PLoS Genet. 10:e1004047
   PubMed Web of Science ®Google Scholar
• Saera-Vila A, Calduch-Giner JA, Navarro I, Perez-Sanchez J. (2007). Tumour necrosis factor (TNF) alpha as a regulator of fat tissue mass in the Mediterranean gilthead sea bream (Sparus aurata L.). Comp Biochem Phys A. 146:338–45
   PubMed Web of Science ®Google Scholar
• Sahar S, Sassone-Corsi P. (2012). Regulation of metabolism: The circadian clock dictates the time. Trends Endocrinol Metab. 23:1–8
   PubMed Web of Science ®Google Scholar
• Sánchez-Vázquez FJ, Aranda A, Madrid JA. (2001). Differential effects of meal size and food energy density on feeding entrainment in goldfish. J Biol Rhythms. 16:58–65
   PubMed Web of Science ®Google Scholar
• Sánchez-Vázquez FJ, Madrid JA, Zamora S, et al. (1997). Feeding entrainment of locomotor activity rhythms in the goldfish is mediated by feeding-entrainable circadian oscillator. J Comp Physiol. 181:121–32
   Web of Science ®Google Scholar
• Schibler U. (2009). The 2008 Pittendrigh/Aschoff lecture: Peripheral phase coordination in the mammalian circadian timing system. J Biol Rhythms. 24:3–15
   PubMed Web of Science ®Google Scholar
• Schroepfer GJ. (2000). Oxysterols: Modulators of cholesterol metabolism and other processes. Physiol Rev. 80:361–554
   PubMed Web of Science ®Google Scholar
• Schultz JR, Tu H, Luk A, et al. (2000). Role of LXRs in control of lipogenesis. Gene Dev. 14:2831–8
   PubMed Web of Science ®Google Scholar
• Schulz N, Himmelbauer H, Rath M, et al. (2011). Role of medium and short-chain L-3-hydroxyacyl-CoA in the regulation of body weight and thermogenesis. Endocrinology. 152:4641–51
   PubMed Web of Science ®Google Scholar
• Seo JB, Moon HM, Kim WS, et al. (2004). Activated liver X receptors stimulate adipocyte differentiation through induction of peroxisome proliferator-activated receptor γ expression. Mol Cell Biol. 24:3430–44
   PubMed Web of Science ®Google Scholar
• Shibata S, Tominaga K. (1991). Brain neuronal mechanisms of circadian rhythms in mammalians. Yakuga Zasshi. 111:270–83
   PubMed Web of Science ®Google Scholar
• Sigurgeirsson B, Porsteinsson H, Sigmundsdóttir S, et al. (2013). Sleep-wake dynamics under extended light and extended dark conditions in adult zebrafish. Behav Brain Res. 256:377–90
   PubMed Web of Science ®Google Scholar
• Steffensen KR, Gustafsson JA. (2004). Putative metabolic effects of the liver X receptor (LXR). Diabetes. 53:36–42
   PubMed Web of Science ®Google Scholar
• Stokkan KA, Yamazaki S, Tei H, et al. (2001). Entrainment of the circadian clock in the liver by feeding. Science. 291:490–3
   PubMed Web of Science ®Google Scholar
• Storch KF, Lipan O, Leykin I, et al. (2002). Extensive and divergent circadian gene expression in liver and heart. Nature. 417:78–83
   PubMed Web of Science ®Google Scholar
• Strubbe JH, Van Dijk G. (2002). The temporal organization of ingestive behaviour and its interaction with regulation of energy balance. Neurosci Biobehav Res. 26:485–98
   PubMed Web of Science ®Google Scholar
• Szántóová K, Zeman M, Veselá A, Herichová I. (2011). Effect of phase delay lighting rotation schedule on daily expression of per2, bmal1, rev-erbα, pparα, and pdk4 genes in the heart and liver of Wistar rats. Mol Cell Biochem. 348:53–60
   PubMed Web of Science ®Google Scholar
• Tontonoz P, Mangelsdorf DJ. (2003). Liver X receptor signaling pathways in cardiovascular disease. Mol Endocrinol. 17:985–93
   PubMed Web of Science ®Google Scholar
• Untergasser A, Cutcutache I, Koressaar T, et al. (2012). Primer3—new capabilities and interfaces. Nucleic Acids Res. 40:e115
   PubMed Web of Science ®Google Scholar
• Vera L, De Pedro N, Gómez-Milán E, et al. (2007). Feeding entrainment of locomotor activity rhythms, digestive enzymes and neuroendocrine factors in goldfish. Physiol Behav. 90:518–24
   PubMed Web of Science ®Google Scholar
• Vera LM, Negrini P, Zagatti C, et al. (2013). Light and feeding entrainment of the molecular circadian clock in a marine teleost (Sparus aurata). Chronobiol Int. 30:649–61
   PubMed Web of Science ®Google Scholar
• Vollmers C, Gill S, DiTacchio L, et al. (2009). Time of feeding and the intrinsic circadian clock drive rhythms in hepatic gene expression. Proc Natl Acad Sci USA. 106:21453–8
   PubMed Web of Science ®Google Scholar
• Welsh D, Takahashi J, Kay S. (2010). Suprachiasmatic nucleus: Cell autonomy and network properties. Annu Rev Physiol. 72:551–77
   PubMed Web of Science ®Google Scholar
• Yoshida C, Shikata N, Seki S, et al. (2012). Early nocturnal meal skipping alters the peripheral clock and increases lipogenesis in mice. Nutr Metab. 9:1
   Google Scholar
• Zhang Y, Mangelsdorf DJ. (2002). Luxuries of lipid homeostasis: The unity of nuclear hormone receptors, transcription regulation, and cholesterol sensing. Mol Interv. 2:78–87
   PubMedGoogle Scholar