Switching from blue to yellow: altering the spectral properties of a high redox potential laccase by directed evolution

References

• Alcalde M, Ferrer M, Plou FJ, Ballesteros A. 2006a. Environmental biocatalysis: from remediation with enzymes to novel green processes. Trends Biotechnol 24:281–287.
   PubMed Web of Science ®Google Scholar
• Alcalde M, Zumárraga M, Polaina J, Ballesteros A, Plou FJ. 2006b. Combinatorial saturation mutagenesis by in vivo overlap extension for the engineering of fungal laccases. Comb Chem High T Scr 9:719–727.
   PubMed Web of Science ®Google Scholar
• Alcalde M. 2007. Laccase: biological functions, molecular structure and industrial applications. In: Polaina J, MacCabe AP, eds. Industrial Enzymes: Structure, Function and Applications. Dordrecht: Springer. pp. 459–474.
   Google Scholar
• Alcalde M. 2010. Mutagenesis protocols in Saccharomyces cerevisiae by in vivo overlap extension. In: Bramman J, ed. In vitro Mutagenesis Protocols. Methods in Molecular Biology. Totowa: Humana Press. pp. 3–14.
   Google Scholar
• Baiocco P, Barreca AM, Fabbrini M, Galli C, Gentili P. 2003. Promoting laccase activity towards non-phenolic substrates: a mechanistic investigation with some laccase-mediator systems. Org Biomol Chem 1:191–197.
   PubMed Web of Science ®Google Scholar
• Baldrian P. 2006. Fungal laccases-occurrence and properties. FEMS Microbiol Rev 30:215–242.
   PubMed Web of Science ®Google Scholar
• Brake AJ. 1990. Alpha-factor leader-directed secretion of heterologous proteins from yeast. Method Enzymol 185: 408–421.
   Google Scholar
• Bulter T, Alcalde M, Sieber V, Meinhold P, Schlachtbauer C, Arnold FH. 2003. Functional expression of a fungal laccase in Saccharomyces cerevisiae by directed evolution. Appl Environ Microb 69:987–995.
   PubMed Web of Science ®Google Scholar
• Cañas AI, Camarero S. 2010. Laccases and their natural mediators: biotechnological tools for sustainable eco-friendly processes. Biotechnol Adv 28:694–705.
   PubMed Web of Science ®Google Scholar
• Christenson A, Shleev S, Mano N, Heller A, Gorton L. 2006. Redox potentials of the blue copper sites of bilirubin oxidases. Biochim Biophys Acta 1757:1634–1641.
   Google Scholar
• Colao M, Lupino CS, Garzillo AM, Buonocore V, Ruzzi M. 2006. Heterologous expression of lccl gene from Trametes trogii in Pichia pastoris and characterization of the recombinant enzyme. Microb Cell Fact 5:31.
   PubMed Web of Science ®Google Scholar
• Coll PM, Fernandez-Abalos JM, Villanueva JR, Santamaria R, Perez P. 1993. Purification and characterization of a phenoloxidase (laccase) from the lignin-degrading basidiomycete PM1 (CECT 2971). Appl Environ Microb 59:2607–2613.
   PubMed Web of Science ®Google Scholar
• Davies GJ, Ducros V. 2002. Laccase. In: Messerschmidt WA, Huber R, Wieghardt K, Poulos T, eds. Handbook of Metalloproteins. New York: John Wiley & Sons. pp. 1359–1368.
   Google Scholar
• Garcia-Ruiz E, Mate D, Ballesteros A, Martinez AT, Alcalde M. 2010. Evolving thermostability in mutant libraries of ligninolytic oxidoreductases expressed in yeast. Microb Cell Fact 9:17.
   PubMed Web of Science ®Google Scholar
• Garcia-Ruiz E, Gonzalez-Perez D, Ruiz-Dueñas FJ, Martinez AT, Alcalde M. 2012. Directed evolution of a temperature, peroxide and alkaline pH tolerant versatile peroxidase. Biochem J 441: 487–498.
   PubMed Web of Science ®Google Scholar
• Haibo Z, Yinglong Z, Feng H, Peiji G, Jiachuan C. 2009. Purification and characterization of a thermostable laccase with unique oxidative characteristics from Trametes hirsuta. Biotechnol Lett 31:837–843.
   PubMed Web of Science ®Google Scholar
• Kunamneni A, Ballesteros A, Plou FJ, Alcalde M. 2007. Fungal laccase: a versatile enzyme for biotechnological applications. In: Mendez-Vilas A, ed. Communicating Current Research and Educational Topics and Trends in Applied Microbiology. Badajoz: Formatex Publishers. pp. 233–245.
   Google Scholar
• Kunamneni A, Camarero S, García C, Plou FJ, Ballesteros A, Alcalde M. 2008a. Engineering and applications of fungal laccases for organic synthesis. Microb Cell Fact 7:1–17.
   Google Scholar
• Kunamneni A, Plou FJ, Ballesteros A, Alcalde M. 2008b. Laccase and their applications: a patent review. Recent Pat Biotechnol 2:10–24.
   PubMedGoogle Scholar
• Larsson T, Lindgren A, Ruzgas T. 2001. Spectroelectrochemical study of cellobiose dehydrogenase and diaphorase in a thiol-modified gold capillary in the absence of mediators. Bioelectrochemistry 53:243–249.
   Google Scholar
• Leontievsky AA, Vares T, Lankinen P, Shergill JK, Pozdnyakova NN, Myasoedova NM, Kalkkinen N, Golovleva LA, Cammac R, Thurston CF, Hatakka A. 1997a. Blue and yellow laccases of ligninolytic fungi. FEMS Microbiol Lett 156:9–14.
   PubMed Web of Science ®Google Scholar
• Leontievsky A, Myasoedova N, Pozdnyakova N, Golovleva L. 1997b. ‘Yellow’ laccase of Panus tigrinus oxidizes non-phenolic substrates without electron-transfer mediators. FEBS Lett 413:446–448.
   PubMed Web of Science ®Google Scholar
• Mansiaux Y, Joseph AP, Gelly JC, de Breven AG. 2011. Assignment of PolyProline II conformation and analysis of sequence-structure relationship. PLoS One 6:e18401.
   Google Scholar
• Mate D, Garcia-Burgos C, Garcia-Ruiz E, Ballesteros AO, Camarero S, Alcalde M. 2010. Laboratory evolution of high-redox potential laccases. Chem Biol 17:1030–1041.
   PubMed Web of Science ®Google Scholar
• Mate D, Garcia-Ruiz E, Camarero S, Alcalde M. 2011. Directed evolution of fungal laccases. Curr Genomics 12:113–122.
   Google Scholar
• Matera IA, Gullotto S, Tilli M, Ferraroni A, Scozzafava A, Briganti F. 2008. Crystal structure of the blue multicopper oxidase from the white-rot fungus Trametes trogii complexed with p-toluate. Inorg Chim Acta 361:4129–4137.
   Web of Science ®Google Scholar
• Min KL, Kim YH, Kim YW, Jung HS, Hah YC. 2001. Characterization of a novel laccase produced by the wood-rotting fungus Phellinus ribis. Arch Biochem Biophys 392:279–286.
   PubMed Web of Science ®Google Scholar
• Morozova OV, Shumakovich GP, Shleev SV, Yaropolov YI. 2007. Laccase-mediator systems and their applications: a review. Appl Biochem Microbiol 43:523–535.
   Web of Science ®Google Scholar
• Palmieri G, Giardina P, Bianco C, Scaloni A, Capasso A, Sannia G. 1997. A novel white laccase from Pleurotus ostreatus. J Biol Chem 272:31301–31307.
   PubMed Web of Science ®Google Scholar
• Pozdnyakova NN, Rodakiewicz-Nowak J, Turkovskaya OV. 2004. Catalytic properties of yellow laccase from Pleurotus ostreatus D1. J Mol Catal B-Enzym 30:19–24.
   Google Scholar
• Pozdnyakova NN, Turkovskaya OV, Yudina EN, Rodakiewicz-Nowak Y. 2006a. Yellow laccase from the fungus Pleurotus ostreatus D1: Purification and characterization. Appl Biochem Microbiol 42:56–61.
   Google Scholar
• Pozdnyakova NN, Rodakiewicz-Nowak J, Turkovskaya OV, Haber J. 2006b. Oxidative degradation of polyaromatic hydrocarbons and their derivatives catalyzed directly by the yellow laccase from Pleurotus ostreatus D1. J Mol Catal B Enzym 41:8–15.
   Web of Science ®Google Scholar
• Riva S. 2006. Laccases: blue enzymes for green chemistry. Trends Biotechnol 24:219–226.
   PubMed Web of Science ®Google Scholar
• Rodakiewicz-Nowak J, Haber J, Pozdnyakova N, Leontievsky A, Golovleva LA. 1999. Effect of ethanol on enzymatic activity of fungal laccases. Bioscience Rep 19:589–600.
   PubMed Web of Science ®Google Scholar
• Rodgers CJ, Blandford CF, Giddens SR, Skamnioti P, Armstrong FA, Gurr SJ. 2010. Designer laccases: a vogue for high-potential fungal enzymes?Trends Biotechnol 28: 63–72.
   PubMed Web of Science ®Google Scholar
• Romanos MA, Scorer CA, Clare JJ. 1992. Foreign gene expression in yeast: a review. Yeast 8:423–488.
   PubMed Web of Science ®Google Scholar
• Schneider PM, Caspersen B, Mondorf K, Halkier T, Skov LK, Ostergaard PR, Brow KM, Brown SH, Xu F. 1999. Characterization of a Coprinus cinereus laccase. Enz Microb Technol 25:502–508.
   Web of Science ®Google Scholar
• Schückel J, Matura A, van Pée KH. 2011. One-copper laccase-related enzyme from Marasmius sp.:Purification, characterization and bleaching of textile dyes. Enzyme Microb Technol 48:278–284.
   Google Scholar
• Scopes RK. 1974. Measurements of protein by spectrophotometry at 205 nm. Anal Biochem 59:277–282.
   PubMed Web of Science ®Google Scholar
• Shleev SV, Morozova O, Nikitina O, Gorshina ES, Rusinova T, Serezhenkov VA, Burbaev DS, Gazaryan IG, Yaropolov AI. 2004. Comparison of physico-chemical characteristics of four laccases from different basidiomycetes. Biochimie 86: 693–703.
   PubMed Web of Science ®Google Scholar
• Shleev S, Shumakovic GP, Nikitina O, Morozova IV, Pavlishko HM, Gayda GZ, Gonchar MV. 2006. Purification and characterization of alcohol oxidase from a genetically constructed over producing strain of the methylotrophic yeast Hansenula polymorpha. Biochemistry (Mosc) 71:245–250.
   Google Scholar
• Shuster JR. 1991. Gene expression in yeast: protein secretion. Curr Opin Biotechnol 2:685–690.
   Google Scholar
• Solomon EI, Sundaram UM, Machonkin TE. 1996. Multicopper oxidases and oxygenases. Chem Rev 96:2563–2605.
   PubMed Web of Science ®Google Scholar
• Sreeram N, Woody RW. 1994. Poly(Pro)II helixes in globular proteins: Identification and circular dichroic analysis. Biochemistry 33:10022–10025.
   Google Scholar
• Xu F. 2005. Applications of oxidoreductases: recent progress. Ind Biotechnol 1:38–50.
   Google Scholar
• Zsebo KM, Lu HS, Fieschko JC, Goldstein L, Davis J, Duker K, Suggs SV, Lai PH, Bitter GA. 1986. Protein secretion from Saccharomyces cerevisiae directed by the prepro-α-factor leader region. J Biol Chem 261:5858–5865.
   PubMed Web of Science ®Google Scholar