Principal component and causal analysis of structural and acute in vitro toxicity data for nanoparticles

References

• Arvizo RR, Miranda OR, Thompson MA, Pabelick CM, Bhattacharya R, Robertson JD, et al. 2010a. Effect of nanoparticle surface charge at the plasma membrane and beyond. Nano Lett 10:2543–2548.
   PubMed Web of Science ®Google Scholar
• Arvizo RR, Mukherjee P, Prakash YS, Thompson MA, Miranda OR, Robertson JD, et al. 2010b. Surface charge determines functional interactions between nanoparticles and cells. Abstracts of Papers of the American Chemical Society 240.
   Google Scholar
• Balbus JM, Maynard AD, Colvin VL, Castranova V, Daston GP, Denison RA, et al. 2007. Meeting report: hazard assessment for nanoparticles - Report from an interdisciplinary workshop. Environ Health Perspect 115:1654–1659.
   PubMed Web of Science ®Google Scholar
• Balshaw DM, Philbert M, Suk WA. 2005. Research strategies for safety evaluation of nanomaterials, part III: nanoscale technologies for assessing risk and improving public health. Toxicol Sci 88:298–306.
   PubMed Web of Science ®Google Scholar
• Barlow PG, Donaldson K, MacCallum J, Clouter A, Stone V. 2005. Serum exposed to nanoparticle carbon black displays increased potential to induce macrophage migration. Toxicol Lett 155:397–401.
   PubMed Web of Science ®Google Scholar
• Barrett EP, Joyner LG, Halenda PP. 1951. The determination of pore volume and area distributions in porous substances. 1. Computations from nitrogen isotherms. J Am Chem Soc 73:373–380.
   Web of Science ®Google Scholar
• Brunauer S, Emmett PH, Teller E. 1938. Adsorption of gases in multimolecular layers. J Am Chem Soc 60:309–319.
   Web of Science ®Google Scholar
• Burello E, Worth A. 2011a. Computational nanotoxicology. Predicting toxicity of nanoparticles. Nat Nanotechnol 6:138–139.
   PubMed Web of Science ®Google Scholar
• Burello E, Worth AP. 2011b. QSAR modeling of nanomaterials. WIREs Nanomed Nanotechnol 3:298–306.
   Web of Science ®Google Scholar
• Cho AK, Sioutas C, Miguel AH, Kumagai Y, Schmitz DA, Singh M, et al. 2005. Redox activity of airborne particulate matter at different sites in the Los Angeles Basin. Environ Res 99:40–47.
   PubMed Web of Science ®Google Scholar
• Cho W-S, Duffin R, Poland CA, Duschl A, Oostingh GJ, MacNee W, et al. 2012. Differential pro-inflammatory effects of metal oxide nanoparticles and their soluble ions in vitro and in vivo; zinc and copper nanoparticles, but not their ions, recruit eosinophils to the lungs. Nanotoxicology 6:22–35.
   PubMed Web of Science ®Google Scholar
• Cho WS, Duffin R, Poland CA, Howie SEM, MacNee W, Bradley M, et al. 2010. Metal oxide nanoparticles induce unique inflammatory footprints in the lung: important implications for nanoparticle testing. Environ Health Perspect 118:1699–1706.
   PubMed Web of Science ®Google Scholar
• Crane M, Handy RD, Garrod J, Owen R. 2008. Ecotoxicity test methods and environmental hazard assessment for engineered nanoparticles. Ecotoxicology 17:421–437.
   PubMed Web of Science ®Google Scholar
• Cui D, Tian F, Ozkan CS, Wang M, Gao H. 2005. Effect of single wall carbon nanotubes on human HEK293 cells. Toxicol Lett 155:73–85.
   PubMed Web of Science ®Google Scholar
• Donaldson K, Murphy FA, Duffin R, Poland CA. 2010. Asbestos, carbon nanotubes and the pleural mesothelium: a review of the hypothesis regarding the role of long fibre retention in the parietal pleura, inflammation and mesothelioma. Part Fibre Toxicol 7.
   PubMed Web of Science ®Google Scholar
• Donaldson K, Stone V, Tran CL, Kreyling W, Borm PJ. 2004. Nanotoxicology. Occup Environ Med 61:727–728.
   PubMed Web of Science ®Google Scholar
• Duffin R, Tran L, Brown D, Stone V, Donaldson K. 2007. Proinflammogenic effects of low-toxicity and metal nanoparticles in vivo and in vitro: highlighting the role of particle surface area and surface reactivity. Inhal Toxicol 19:849–856.
   PubMed Web of Science ®Google Scholar
• Fubini B, Ghiazza M, Fenoglio I. 2010. Physico-chemical features of engineered nanoparticles relevant to their toxicity. Nanotoxicology 4:347–363.
   PubMed Web of Science ®Google Scholar
• Geller MD, Ntziachristos L, Mamakos A, Samaras Z, Schmitz DA, Froines JR, et al. 2006. Physicochemical and redox characteristics of particulate matter (PM) emitted from gasoline and diesel passenger cars. Atmos Environ 40:6988–7004.
   Web of Science ®Google Scholar
• Handy RD, Kammer FVD, Lead JR, Hassellöv M, Owen R, Crane M. 2008. The ecotoxicology and chemistry of manufactured nanoparticles. Ecotoxicology 17:287–314.
   PubMed Web of Science ®Google Scholar
• Hornung V, Bauernfeind F, Halle A, Samstad EO, Kono H, Rock KL, et al. 2008. Silica crystals and aluminum salts activate the NALP3 inflammasome through phagosomal destabilization. Nat Immunol 9:847–856.
   PubMed Web of Science ®Google Scholar
• Jones T, Moreno T, BeruBe K, Richards R. 2006. The physicochemical characterisation of microscopic airborne particles in South Wales: a review of the locations and methodologies. Sci Total Environ 360:43–59.
   PubMed Web of Science ®Google Scholar
• Kent RD, Vikesland PJ. 2012. Controlled evaluation of silver nanoparticle dissolution using atomic force microscopy. Environ Sci Technol 46:6977–6984.
   PubMed Web of Science ®Google Scholar
• Lam CW, James JT, McCluskey R, Hunter RL. 2004. Pulmonary toxicity of single-wall carbon nanotubes in mice 7 and 90 days after intratracheal instillation. Toxicol Sci 77:126–134.
   PubMed Web of Science ®Google Scholar
• Langmuir I. 1916. The constitution and fundamental properties of solids and liquids Part I Solids. J Am Chem Soc 38:2221–2295.
   Web of Science ®Google Scholar
• Lu SL, Duffin R, Poland C, Daly P, Murphy F, Drost E, et al. 2009. Efficacy of simple short-term in vitro assays for predicting the potential of metal oxide nanoparticles to cause pulmonary inflammation. Environ Health Perspect 117:241–247.
   PubMed Web of Science ®Google Scholar
• Muller J, Huaux F, Lison D. 2006. Respiratory toxicity of carbon nanotubes: how worried should we be? Carbon 44:1048–1056.
   Web of Science ®Google Scholar
• Murdock RC, Braydich-Stolle L, Schrand AM, Schlager JJ, Hussain SM. 2008. Characterization of nanomaterial dispersion in solution prior to in vitro exposure using dynamic light scattering technique. Toxicol Sci 101:239–253.
   PubMed Web of Science ®Google Scholar
• Murphy F, Duffin R, Poland CA, Duffin R, Al-Jamal KT, Ali-Boucetta H, et al. 2011. Length dependent retention of carbon nanotubes in the pleural space of mice initiates sustained inflammation and progressive fibrosis on the parietal pleura. Am J Pathol 178(6):2587–2600.
   PubMed Web of Science ®Google Scholar
• Nel A, Xia T, Madler L, Li N. 2006. Toxic potential of materials at the nanolevel. Science 311:622–627.
   PubMed Web of Science ®Google Scholar
• Nel AE, Madler L, Velegol D, Xia T, Hoek EMV, Somasundaran P, et al. 2009. Understanding biophysicochemical interactions at the nano- bio interface. Nat Mater 8:543–557.
   PubMed Web of Science ®Google Scholar
• Oberdorster G, Maynard A, Donaldson K, Castranova V, Fitzpatrick J, Ausman K, Group ArftIRFRSINTSW. 2005a. Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy. Part Fibre Toxicol 2:8.
   PubMed Web of Science ®Google Scholar
• Oberdorster G, Maynard A, Donaldson K, Castranova V, Fitzpatrick J, Ausman K, Group IRFRSINTSW. 2005b. Principles for characterizing the potential human health effects from exposure to nanomaterials: elements of a screening strategy. Part Fibre Toxicol 2:8.
   PubMed Web of Science ®Google Scholar
• Oberdorster G, Oberdorster E, Oberdorster J. 2005c. Nanotoxicology: an emerging discipline evolving from studies of ultrafine particles. Environ Sci Technol 113:823–839.
   Google Scholar
• Poland C, Byrne F, Cho WS, Prina-Mello A, Murphy F, Davies GL, et al. Length–dependent inflammatory and fibrogenic effects of nickel oxide nanowires in the lungs and the peritoneal cavity.
   Google Scholar
• Poland CA, Duffin R, Kinloch I, Maynard A, Wallace WAH, Seaton A, et al. 2008. Carbon nanotubes introduced into the abdominal cavity of mice show asbestos-like pathogenicity in a pilot study. Nat Nanotechnol 3:423–428.
   PubMed Web of Science ®Google Scholar
• Powers KW, Brown SC, Krishna VB, Wasdo SC, Moudgil BM, Roberts SM. 2006. Research strategies for safety evaluation of nanomaterials. Part VI. Characterization of nanoscale particles for toxicological evaluation. Toxicol Sci 90:296–303.
   PubMed Web of Science ®Google Scholar
• Powers KW, Palazuelos M, Moudgil BM, Roberts SM. 2007. Characterization of the size, shape, and state of dispersion of nanoparticles for toxicological studies. Nanotoxicology 1:42–51.
   Web of Science ®Google Scholar
• Price H, Arthur R, Sexton K, Gregory C, Hoogendoorn B, Matthews I, et al. 2010. Airborne particles in Swansea, UK: their collection and characterization. J Toxicol Environ Health A 73:355–367.
   PubMed Web of Science ®Google Scholar
• Puzyn T, Rasulev B, Gajewicz A, Hu X, Dasari TP, Michalkova A, et al. 2011. Using nano-QSAR to predict the cytotoxicity of metal oxide nanoparticles. Nat Nanotechnol 6:175–178.
   PubMed Web of Science ®Google Scholar
• Rivera-Gil P, Aberasturi DJD, Wulf V, Pelaz B, Pino PD, Zhao Y, et al. 2012. The challenge to relate the physicochemical properties of colloidal nanoparticles to their cytotoxicity. Acc Chem Res DOI: 10.1021/ar300039j.
   PubMed Web of Science ®Google Scholar
• Rushton EK, Jiang J, Leonard SS, Eberly S, Castranova V, Biswas P, et al. 2010. Concept of assessing nanoparticle hazards considering nanoparticle dosemetric and chemical/biological response metrics. J Toxicol Environ Health A 73:445–461.
   PubMed Web of Science ®Google Scholar
• Sauvain JJ, Deslarzes S, Riediker M. 2008. Nanoparticle reactivity toward dithiothreitol. Nanotoxicology 2:121–129.
   Web of Science ®Google Scholar
• Shvedova AA, Castranova V, Kisin ER, Schwegler-Berry D, Murray AR, Gandelsman VZ. 2003. Exposure to carbon nanotube material: assessment of nanotube cytotoxicity using human keratinocyte cells. J Toxicol Environ Health A 66:1909–1926.
   PubMed Web of Science ®Google Scholar
• Thomas K, Sayre P. 2005. Research strategies for safety evaluation of nanomaterials, part I: evaluating the human health implications of exposure to nanoscale materials. Toxicol Sci 87:316–321.
   PubMed Web of Science ®Google Scholar
• Tsuji JS, Maynard AD, Howard PC, James JT, Lam CW, Warheit DB, et al. 2006. Research strategies for safety evaluation of nanomaterials, part IV: risk assessment of nanoparticles. Toxicol Sci 89:42–50.
   PubMed Web of Science ®Google Scholar
• Valle S, Li WH, Qin SJ. 1999. Selection of the number of principal components: the variance of the reconstruction error criterion with a comparison to other methods. Indust Eng Chem Res 38:4389–4401.
   Web of Science ®Google Scholar
• Verma A, Uzun O, Hu YH, Hu Y, Han HS, Watson N, et al. 2008. Surface-structure-regulated cell-membrane penetration by monolayer-protected nanoparticles. Nat Mater 7:588–595.
   PubMed Web of Science ®Google Scholar