Global haplotype analysis of the whitefly Bemisia tabaci cryptic species Asia I in Asia

References

• Armstrong KF, Ball SL. (2005). DNA barcodes for biosecurity: Invasive species identification. Phil Trans R Soc B 360:1813–23
   PubMed Web of Science ®Google Scholar
• Avise JC. (2000). Phylogeography: The history and formation of species. Cambridge, MA: Harvard University Press
   Google Scholar
• Bedford ID, Briddon RW, Brown JK, Rosell RC, Markham PG. (1994). Geminivirus transmission and biological characterisation of Bemisia tabaci (Gennadius) biotypes from different geographic regions. Ann Appl Biol 125:311–25
   Web of Science ®Google Scholar
• Boykin LM, Shatters RG, Rosell RC, McKenzie CL, Bagnall RA, De Barro P, Frohlich DR. (2007). Global relationships of Bemisia tabaci (Hemiptera: Aleyrodidae) revealed using Bayesian analysis of mitochondrial CO1 DNA sequence. Mol Phylogenet Evol 44:1306–19
   PubMed Web of Science ®Google Scholar
• Brown JK, Frohlich DR, Rosell RC. (1995). The sweetpotato or silverleaf whiteflies: Biotypes of Bemisia tabaci (Genn.), or a species complex? Annu Rev Entomol 40:511–34
   Web of Science ®Google Scholar
• Clement M, Posada D, Crandall KA. (2000). TCS: A computer program to estimate gene genealogies. Mol Ecol 9:1657–9
   PubMed Web of Science ®Google Scholar
• Czosnek H, Ghanim M, Ghanim M. (2002). The circulative pathway of begomoviruses in the whitefly vector Bemisia tabaci-insights from studies with Tomato yellow leaf curl virus. Ann Appl Biol 140:215–31
   Web of Science ®Google Scholar
• Dalton R. (2006). The Christmas invasion. Nature 443:898–900
   PubMed Web of Science ®Google Scholar
• De Barro P, Ahmed MZ. (2011). Genetic networking of the bemisia tabaci cryptic species complex reveals pattern of biological invasions. PLoS One 6:e25579
   PubMed Web of Science ®Google Scholar
• De Barro PJ, Liu SS, Boykin LM, Dinsdale AB. (2011). Bemisia tabaci: A statement of species status. Annu Rev Entomol 56:1–19
   PubMed Web of Science ®Google Scholar
• Delatte H, Reynaud B, Granier M, Thornary L, Lett JM, Goldbach R, Peterschmitt M. (2005). A new silverleaf-inducing biotype Ms of Bemisia tabaci (Hemiptera: Aleyrodidae) indigenous to the islands of the south-west Indian Ocean. Bull Entomol Res 95:29–35
   PubMed Web of Science ®Google Scholar
• Dinsdale A, Cook L, Riginos C, Buckley YM, De Barro P. (2010). Refined global analysis of Bemisia tabaci (Hemiptera: Sternorrhyncha: Aleyrodoidea: Aleyrodidae) mitochondrial cytochrome oxidase 1 to identify species level genetic boundaries. Ann Entomol Soc Am 103:196–208
   Web of Science ®Google Scholar
• Dlugosch KM, Parker IM. (2008). Founding events in species invasions: Genetic variation, adaptive evolution, and the role of multiple introductions. Mol Ecol 17:431–49
   PubMed Web of Science ®Google Scholar
• Elbaz M, Lahav N, Morin S. (2010). Evidence for pre-zygotic reproductive barrier between the B and Q biotypes of Bemisia tabaci. Bull Entomol Res 100:581–90
   PubMed Web of Science ®Google Scholar
• Firdaus S, Vosman B, Hidayati N, Supena EDJ, Visser RGF, van Heusden AW. (2012). The Bemisia tabaci species complex: Additions from different parts of the world. Insect Sci, early online, DOI:10.1111/1744-7917.12001
   Google Scholar
• Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3:294–9
   PubMedGoogle Scholar
• Freeland JR. (2005). Molecular ecology. Chichester, West Sussex: John Wiley & Sons Ltd, The Atrium, Southern Gate. p 31–61
   Google Scholar
• Galtier N, Nabholz B, Glemin S, Hurst DDG. (2009). Mitochondrial DNA as a marker of molecular diversity: A reappraisal. Mol Ecol 18:4541–50
   PubMed Web of Science ®Google Scholar
• Gueguen G, Vavre F, Gnankine O, Peterschmitt M, Charif D, Chiel E, Gottlieb Y, et al. (2010). Endosymbiont metacommunities, mtDNA diversity and the evolution of the Bemisia tabaci (Hemiptera: Aleyrodidae) species complex. Mol Ecol 19:4365–76
   Google Scholar
• Hausmann A, Haszprunar G, Hebert PDN. (2011). DNA barcoding the Geometrid Fauna of Bavaria (Lepidoptera): Successes, surprises, and questions. PLoS One 6:e17134
   PubMed Web of Science ®Google Scholar
• Hebert PDN, Cywinska A, Ball SL, de Waard JR. (2003). Biological identifications through DNA barcodes. Proc R Soc Lond B Biol Sci 270:313–21
   PubMed Web of Science ®Google Scholar
• Hebert PDN, Penton EH, Burns JM, Janzen DH, Hallwachs W. (2004b). Ten species in one: DNA barcoding reveals cryptic species in the neotropical skipper butterfly Astraptes fulgerator. PNAS 101:14812–17
   PubMed Web of Science ®Google Scholar
• Hebert PDN, Stoeckle MY, Zemlak TS, Francis CM. (2004a). Identification of birds through DNA barcodes. PLoS Biol 10:e312
   Google Scholar
• Herborg LM, Weetman D, van Oosterhout C, Hanfling B. (2007). Genetic population structure and contemporary dispersal patterns of a recent invader, the Chinese mitten crab, Eriocheir sinesis. Mol Ecol 16:231–42
   PubMed Web of Science ®Google Scholar
• Hogenhout SA, Ammar DE, Whitfield AE, Redinbaugh MG. (2008). Insect vector interactions with persistently transmitted viruses. Annu Rev Phytopathol 46:327–59
   PubMed Web of Science ®Google Scholar
• Hu J, De Barro P, Zhao H, Wang J, Nardi F, Liu SS. (2011). An extensive field survey combined with a phylogenetic analysis reveals rapid and widespread invasion of two alien whiteflies in China. PLoS One 6:e16061
   PubMed Web of Science ®Google Scholar
• Hu J, Zhang JL, Nardi F, Zhang RJ. (2008). Population genetic structure of the melon fly, Bactrocera cucurbitae (Diptera: Tephritidae), from China and Southeast Asia. Genetica 134:319–24
   PubMed Web of Science ®Google Scholar
• Jones DR. (2003). Plant viruses transmitted by whiteflies. Eur J Plant Pathol 109:195–219
   Web of Science ®Google Scholar
• Kawamura K, Ohno S, Haraguchi D, Kawashima S, Kohama T. (2009). Geographic variation of elytral color in the sweet potato weevil, Cylas formicarius (Coleoptera: Brentidae), in Japan. Appl Entomol Zool 44:505–13
   Web of Science ®Google Scholar
• Leite LAR. (2012). Mitochondrial pseudogenes in insect DNA barcoding: Differing points of view on the same issue. Biota Neotrop 12:301–8
   Web of Science ®Google Scholar
• Librado P, Rozas J. (2009). DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451–2
   PubMed Web of Science ®Google Scholar
• Liu SS, Colvin J, De Barro PJ. (2012). Species concepts as applied to the whitefly Bemisia tabaci systematics: How many species are there? J Integr Agri 11:176–86
   Web of Science ®Google Scholar
• Liu SS, De Barro PJ, Xu J, Luan JB, Zang LS, Ruan YM, Wan FH. (2007). Asymmetric mating interactions drivewidespread invasion and displacement in a whitefly. Science 318:1769–72
   PubMed Web of Science ®Google Scholar
• Malacrida A, Gomulski L, Bonizzoni M, Bertin S, Gasperi G, Guglielmino C. (2007). Globalization and fruit fly invasion and expansion: The medfly paradigm. Genetica 131:1--9
   Google Scholar
• Myers N, Mittermeier RA, Mittermeier CG, da Fonceca GAB, Kent J. (2000). Biodiversity hotspots for conservation priorities. Nature 403:853–8
   PubMed Web of Science ®Google Scholar
• Naranjo SE, Castle SJ, De Barro PJ, Liu SS. (2010). Population dynamics, demography, dispersal and spread of Bemisia tabaci. In: Stansly PA, Naranjo SE, editors. Bemisia: Bionomics and management of a global pest. Dordrecht, The Netherlands: Springer. p 185–226
   Google Scholar
• Nardi F, Carapelli A, Dallai R, Roderick GK, Frati F. (2005). Population structure and colonization history of the olive fly, Bactrocera oleae (Diptera, Tephritidae). Mol Ecol 14:2729–38
   PubMed Web of Science ®Google Scholar
• Pfenninger M, Nowak C, Kley C, Steinke D, Streit B. (2007). Utility of DNA taxonomy and barcoding for the inference of larval community structure in morphologically cryptic Chironomus (Diptera) species. Mol Ecol 16:1957–68
   PubMed Web of Science ®Google Scholar
• Prabhakar CS, Mehta PK, Sood P, Singh SK, Sharma P, Sharma PN. (2012). Population genetic structure of the melon fly, Bactrocera cucurbitae (Coquillett) (Diptera: Tephritidae) based on mitochondrial cytochrome oxidase (COI) gene sequences. Genetica 140:83–91
   PubMed Web of Science ®Google Scholar
• Ratnasingham S, Hebert PDN. (2007). BOLD: The barcode of life data system. Mol Ecol Notes 7:355–64
   PubMed Web of Science ®Google Scholar
• Rekha AR, Maruthi MN, Muniyappa V, Colvin J. (2005). Occurrence of three genotypic clusters of Bemisia tabaci and the rapid spread of the B biotype in south India. Entomol Exp Appl 117:221–3
   Web of Science ®Google Scholar
• Simon C, Frati F, Beckenback A, Crespi B, Hong L, Flook P. (1994). Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am 87:651–701
   Web of Science ®Google Scholar
• Singh ST, Priya NG, Kumar J, Rana VS, Ellango R, Joshi A, Priyadarshini G, et al. (2012). Diversity and phylogenetic analysis of endosymbiotic bacteria from field caught Bemisia tabaci from different locations of North India based on 16S rDNA library screening. Infect Genet Evol 12:411–19
   PubMed Web of Science ®Google Scholar
• Shoorcheh HR, Kazemi B, Manzari S, Brown JK, Sarafrazi A. (2008). Genetic variation and mtCOI phylogeny for Bemisia tabaci (Hemiptera, Aleyrodidae) indicate that the ‘B’ biotype predominates in Iran. J Pest Sci 81:199–206
   Web of Science ®Google Scholar
• Smith MA, Woodley NE, Janzen DH, Hallwachs W, Hebert PDN. (2006). DNA barcodes reveal cryptic host-specificity within the presumed polyphagous members of a genus of parasitoid flies (Diptera: Tachinidae). PNAS 103:3657–62
   PubMed Web of Science ®Google Scholar
• Sun DB, Xu J, Liu SS. (2011). Reproductive incompatibility between the B and Q biotypes of the whitefly Bemisia tabaci in China: Genetic and behavioural evidence. Bull Entomol Res 101:211–20
   PubMed Web of Science ®Google Scholar
• Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. (2011). MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–9
   PubMed Web of Science ®Google Scholar
• Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. (1997). The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 22:4673–80
   Web of Science ®Google Scholar
• Ueda S, Kitamura T, Kijima K, Honda K, Kanmiya K. (2009). Distribution and molecular characterization of distinct Asian populations of Bemisia tabaci (Hemiptera: Aleyrodidae) in Japan. J Appl Entomol 133:355–66
   Web of Science ®Google Scholar
• Virgilio M, Delatte H, Backeljau T, De Meyer M. (2010). Macrogographic population structuring in the cosmopolitian agricultural pest Bactrocera cucurbitae (Diptera: Tephritidae). Mol Ecol 19:2713–24
   PubMed Web of Science ®Google Scholar
• Wan X, Nardi F, Zhang B, Liu Y. (2011). The oriental fruit fly, Bactrocera dorsalis, in China: Origin and gradual inland range expansion associated with population growth. PLoS One 6:e25238
   PubMed Web of Science ®Google Scholar
• Wang P, Sun DB, Qiu BL, Liu SS. (2011). The presence of six putative species of the whitefly Bemisia tabaci complex in China as revealed by crossing experiments. Insect Sci 18:67–77
   Web of Science ®Google Scholar
• Wang XW, Zhao QY, Luan JB, Wang YJ, Yan GH, Liu SS. (2012). Analysis of a native whitefly transcriptome and its sequence divergence with two invasive whitefly species. BMC Genomics 13:529
   PubMed Web of Science ®Google Scholar
• Xu J, De Barro PJ, Liu SS. (2010). Reproductive incompatibility among genetic groups of Bemisia tabaci supports the proposition that the whitefly is a cryptic species complex. Bull Entomol Res 100:359–66
   PubMed Web of Science ®Google Scholar
• Zhang DX, Hewitt GM. (1997). Assessment of the universality and utility of a set of conserved mitochondrial primers in insects. Insect Mol Biol 6:143–50
   PubMed Web of Science ®Google Scholar