Publication Cover
Mitochondrial DNA
The Journal of DNA Mapping, Sequencing, and Analysis
Volume 26, 2015 - Issue 4
169
Views
6
CrossRef citations to date
0
Altmetric
Research Article

Haplotypes and variable position detection in the mitochondrial DNA coding region encompassing nucleotide positions 10,716–11,184

, , , &
Pages 544-549 | Received 12 Oct 2013, Accepted 23 Nov 2013, Published online: 07 Jan 2014

References

  • Al-Zahery N, Pala M, Battaglia V, Grugni V, Hamod MA, Kashani BH, Olivieri A, et al. (2011). In search of the genetic footprints of Sumerians: A survey of Y-chromosome and mtDNA variation in the Marsh Arabs of Iraq. BMC Evol Biol 11:288
  • Al-Zahery N, Semino O, Benuzzi G, Magri C, Passarino G, Torroni A, Santachiara-Benerecetti AS. (2003). Y-chromosome and mtDNA polymorphisms in Iraq, a crossroad of the early human dispersal and of post-Neolithic migrations. Mol Phylogenetics Evol 28:458--72
  • Anderson S, Bankier AT, Barrell BG, De Bruijn MH, Coulson AR, Drouin J. (1981). Sequence and organization of the human mitochondrial genome. Nature 290:457–65
  • Brown JR, Bechenbach AT, Smith MJ. (1995). Intraspecific DNA sequence variation of the mitochondrial control region of white sturgeon (Acipenser transmontanus). Mol Biol Evol 10:326–41
  • Brown WM, Prager EM, Wang A. (1982). Mitochondrial DNA sequences of primates: Tempo and mode of evolution. J Mol Evol 18:225–39
  • David HW, Jonathan K, Arthur JE, Bruce B. (2013). Validation of the PLEX-IDTM mass spectrometry mitochondrial DNA assay. Int J Leg Med 127:277–86
  • Giulietta Di B, Ivane SN, Michele S, Lorendana N. (2000). Mitochondrial DNA sequences in prehistoric human remains from the Alps. Eur J Hum Genet 8:669–77
  • Helgason A, Hrafnkelsson B, Gulcher JR, Ward R, Stefánsson K. (2003). Population wide coalescent analysis of Icelandic matrilineal and patrilineal genealogies: Evidence for a faster evolutionary rate of mtDNA lineages than Y chromosomes. Am J Hum Genet 72:1370–88
  • Holland MM, McQuillan MR, O’Hanlon KA. (2011). Second generation sequencing allows for mtDNA mixture deconvolution and high resolution detection of heteroplasmy. Croat Med J 52:299–313
  • Holland MM, Parsons TJ. (1999). Mitochondrial DNA sequence analysis – Validation and use for forensic casework. Forensic Sci Revi 11:21–48
  • Homer N, Szelinger S, Redman M, Duggan D, Tembe W, Muehling J. (2008). Resolving individuals contributing trace amounts of DNA to highly complex mixtures using high-density SNP genotyping microarrays. PLoS Genet 4:e1000167
  • Ingman M, Gyllensten U. (2003). Mitochondrial genome variation and evolutionary history of Australian and New Guinean aborigines. Genome Res 13:1600–6
  • Jones DA. (1972). Blood samples: Probability of discrimination. J Forensic Sci Soc 12:355–8
  • Kraytsberg Y, Schwartz M, Brown TA, Ebralidse K, Kunz WS, Clayton DA, Vissing J, Khrapko K. (2004). Recombination of human mitochondrial DNA. Science 304:981--9
  • Mitomap: A human mitochondrial genome database; 2013. Available at: http://www.mitomap.org
  • SEQUENCHER™ 4.7 User Manual for Windows © (1991–2007). Gene Codes Corporation, Inc. All rights reserved Available at: http://sequencher.bio.indiana.edu
  • Sosa MX, Sivakumar IKA, Maragh S, Veeramachaneni V, Hariharan R. (2012). Next-generation sequencing of human mitochondrial reference genomes uncovers high heteroplasmy frequency. PLoS Comput Biol 8:e1002737
  • Tzen C, Wu T, Liu H. (2001). Sequence polymorphism in the coding region of the mitochondrial genome encompassing position 8389–8865. Forensic Sci Intl 120:204–9
  • Ukhee C, Hwan YL, Ji-Eun Y. (2005). Mitochondrial DNA CA dinucleotide repeats in Koreans: The presence of length heteroplasmy. Int J Legal Med 119:50–3
  • Yang Z, Yoder AD. (1999). Estimation of the transition/transversion rate bias and species sampling. J Mol Evol 48:274–83

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.