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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 27, 2016 - Issue 1
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Original Article

Phylogeographical structure in mitochondrial DNA of eggplant fruit and shoot borer, Leucinodes orbonalis Guenée (Lepidoptera: Crambidae) in South and Southeast Asia

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Pages 198-204 | Received 14 Nov 2013, Accepted 05 Jan 2014, Published online: 03 Feb 2014

References

  • Alam SN, Hossain MI, Rouf FMA, Jhala RC, Patel MG, Rath LK, Sengupta A, et al. (2006). Implementation and promotion of an IPM strategy for control of eggplant fruit and shoot borer in South Asia. Shanhua, Taiwan: AVRDC – The World Vegetable Center
  • Alam SN, Rashid MA, Rouf FMA, Jhala RC, Patel JR, Satpathy S, Shivalingaswamy TM, et al. (2003). Development of an integrated pest management strategy for eggplant fruit and shoot borer in South Asia. Shanhua, Taiwan: AVRDC – The World Vegetable Center
  • Ali MI, Ali MS, Rahman MS. (1980). Field observation of wilt disease and shoot and fruit borer attack on different cultivars of brinjal [Solanum melongena Linn., Bangladesh]. Bangladesh J Agric Sci 7:193–4
  • Alvarez N, Hossaert-McKey M, Restoux G, Delgado-Salinas A, Benrey B. (2007). Anthropogenic effects on population genetics of phytophagous insects associated with domesticated plants. Evolution 61:2986–96
  • Avise JC. (2000). Phylogeography: The history and formation of species. Cambridge, MA: Harvard University Press
  • AVRDC. (1990). Vegetable production training manual. Shanhua, Taiwan: AVRDC – The World Vegetable Center
  • Caragiulo A, Dias-Freedman I, Clark JA, Rabinowitz S, Amato G. (2013). Mitochondrial DNA sequence variation and phylogeography of Neotropic pumas (Puma concolor). Mitochondrial DNA. [Epub ahead of print]. doi: 10.3109/19401736.2013.800486
  • Castoe TA, Spencer CL, Parkinson CL. (2007). Phylogeographic structure and historical demography of the western diamondback rattlesnake (Crotalus atrox): A perspective on North American desert biogeography. Mol Phylogenet Evol 42:193–212
  • Chen NC. (1997). Cultivation and seed production of eggplant. In: Training Workshop on Vegetable Cultivation and Seed Production Technology. Shanhua, Taiwan: AVRDC – The World Vegetable Center. p 4
  • Chen NC, Kalb T, Talekar NS, Wang JF, Ma CH. (2001). Suggested cultural practices for eggplant. In: AVRDC Training Guide. Shanhua, Taiwan: AVRDC – The World Vegetable Center. p 8
  • Chen NC, Li HM. (1996). Cultivation and breeding of eggplant. In: Training workshop on vegetable cultivation and seed production. Shanhua, Taiwan: AVRDC – The World Vegetable Center. p 25
  • Collin H, Fumagalli L. (2011). Evidence for morphological and adaptive genetic divergence between lake and stream habitats in European minnows (Phoxinus phoxinus, Cyprinidae). Mol Ecol 20:4490–502
  • Conn J, Cockburn AF, Mitchell SE. (1993). Population differentiation of the malaria vector Anopheles aquasalis using mitochondrial DNA. J Hered 84:248–53
  • Conn JE, Mitchell SE, Cockburn AF. (1998). Mitochondrial DNA analysis of the neotropical malaria vector Anopheles nuneztovari. Genome 41:313–27
  • Doganlar S, Frary A, Daunay M-C, Lester RN, Tanksley SD. (2002). A comparative genetic linkage map of eggplant (Solanum melongena) and its implications for genome evolution in the Solanaceae. Genetics 161:1697–711
  • Excoffier L, Lischer HE. (2010). Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 10:564–67
  • Excoffier L, Smouse PE, Quattro JM. (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data. Genetics 131:479–91
  • Fairley TL, Renaud TM, Conn JE. (2000). Effects of local geographic barriers and latitude on population structure in Anopheles punctipennis (Diptera: Culicidae). J Med Entomol 37:754–60
  • FAOSTAT. (2011). Food and Agriculture Organization of the United Nations Cropping Database. Available at: http://faostat.fao.org/site/567/default.aspx#ancor (Accessed 12 June 2013).
  • Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R. (1994). DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3:294–9
  • Fu Y-X. (1997). Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147:915–25
  • Galtier N, Nabholz B, GlÉMin S, Hurst GDD. (2009). Mitochondrial DNA as a marker of molecular diversity: A reappraisal. Mol Ecol 18:4541–50
  • Gapud VP, Canapi BL. (1994). Preliminary survey of insects of onions, eggplant and string beans in San Jose, Nueva Ecija. Philippines Country Report, IPM CRSP – First Annual Report [Online]. Available at: http://www.oired.vt.edu/ipmcrsp/Publications/AnnualReports/1994/Phil_country_rpt.html (Accessed 12 June 2013).
  • Grant WAS, Bowen BW. (1998). Shallow population histories in deep evolutionary lineages of marine fishes: Insights from sardines and anchovies and lessons for conservation. J Hered 89:415–26
  • Graves J Jr. (2010). Biological v. social definitions of race: Implications for modern biomedical research. Rev Black Polit Econ 37:43–60
  • Hebert PDN, Cywinska A, Ball SL, deWaard JR. (2003). Biological identifications through DNA barcodes. Proc R Soc Lond B Biol Sci 270:313–21
  • Jensen JL, Bohonak AJ, Kelley ST. (2005). Isolation by distance, web service. BMC Genet 6:13
  • Kalloo G, editor. (1988). Solanaceous crops. In: Vegetable breeding, Vol. II. Boca Raton, FL: CRC Press. p 520–70
  • Kimura M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–20
  • Li T, Zhang M, Qu Y, Ren Z, Zhang J, Guo Y, Heong KL, et al. (2011). Population genetic structure and phylogeographical pattern of rice grasshopper, Oxya hyla intricata, across Southeast Asia. Genetica 139:511–24
  • Liao P-C, Kuo D-C, Lin C-C, Ho K-C, Lin T-P, Hwang S-Y. (2010). Historical spatial range expansion and a very recent bottleneck of Cinnamomum kanehirae Hay. (Lauraceae) in Taiwan inferred from nuclear genes. BMC Evol Biol 10:124
  • Librado P, Rozas J. (2009). DnaSP v5: A software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451–2
  • Mantel N. (1967). The detection of disease clustering and a generalized regression approach. Cancer Res 27:209–20
  • Marimuthu M, Perumal Y, Salim AP, Sharma G. (2009). Genetic similarity of eggplant shoot and fruit borer, Leucinodes orbonalis, populations. DNA Cell Biol 28:599–603
  • Navasero MV. (1983). Biology and chemical control of the eggplant fruit and shoot borer, Leucinodes orbonalis Guenée (Pyraustidae: Lepidoptera). B.Sc. Thesis, University of the Philippines at Los Banos, Philippines
  • Orden MEM, Patricio MG, Canoy VV. (1994). Extent of pesticide use in vegetable production in Nueva Ecija: Empirical evidence and policy implications. Res Dev Highlights 94:196–213
  • Owusu J. (1980). The effect of Gardona (Tetrachlovinphos) on the insect fauna of eggplant, Solanum melongena L. B.Sc. Thesis, University of Ghana, Legon
  • Peterson MA, Denno RF. (1998). The influence of dispersal and diet breadth on patterns of genetic isolation by distance in phytophagous insects. Am Nat 152:428–46
  • Polzin T, Daneshmand SV. (2003). On Steiner trees and minimum spanning trees in hypergraphs. Oper Res Lett 31:12–20
  • Rice W. (1987). Speciation via habitat specialization: The evolution of reproductive isolation as a correlated character. Evol Ecol 1:301–14
  • Roderick GK. (1996). Geographic structure of insect populations: Gene flow, phylogeography, and their uses. Annu Rev Entomol 41:325–52
  • Servedio MR, Noor MAF. (2003). The role of reinforcement in speciation: Theory and data. Annu Rev Ecol Evol Syst 34:339–64
  • Simons C, Frati F, Beckenbach A, Crespi B, Liu H, Floors P. (1994). Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am 87:651–701
  • Smith HM, Chiszar D, Montanucci RR. (1997). Subspecies and classification. Herpetol Rev 28:13–17
  • Srinivasan R. (2008). Integrated pest management for eggplant fruit and shoot borer (Leucinodes orbonalis) in South and Southeast Asia: Past, present and future. J Biopesticides 1:105–12
  • Srinivasan R. (2009). Insect and mite pests on eggplant: A field guide for identification and management. Shanhua, Taiwan: AVRDC – The World Vegetable Center
  • Tajima F. (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585–95
  • Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. (2011). MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol 28:2731–9
  • Templeton AR. (1998). Human races: A genetic and evolutionary perspective. Am Anthropol 100:632–50
  • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. (1997). The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25:4876–82
  • Vavilov NI. (1935). Origin and geography of cultivated plants. In: The phytogeographical basis for plant breeding (Love D, transl.). Vol. 1. Cambridge, UK: Cambridge University Press. p 316–66
  • Via S. (1999). Reproductive isolation between sympatric races of pea aphids. I. Gene flow restriction and habitat choice. Evolution 53:1446–57
  • Wang J-X, Gao T-G, Knapp S. (2008). Ancient chinese literature reveals pathways of eggplant domestication. Ann Bot 102:891–7
  • Waterhouse DF. (1998). Biological control of insect pests: Southeast Asian prospects. Canberra, Australia: Australian Centre for International Agricultural Research
  • Whittle K, Ferguson DC. (1987). Eggplant fruit borer, Leucinodes orbonalis Guenée. Pests not known to occur in the United States or of limited distribution. APHIS 81 – US Department of Agriculture, Animal and Plant Health Inspection Service 85: p 1–9
  • Zhang M, Rao D, Yang J, Yu G, Wilkinson JA. (2010). Molecular phylogeography and population structure of a mid-elevation montane frog Leptobrachium ailaonicum in a fragmented habitat of southwest China. Mol Phylogenet Evol 54:47–58

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