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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 27, 2016 - Issue 5
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Mitogenome Announcement

The complete mitogenome of the New Zealand freshwater crayfish Paranephrops planifrons White 1842 (Crustacea: Decapoda: Parastacidae)

Yin Peng LeeSchool of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor, Malaysia, ;Monash University Malaysia Genomics Facility, Jalan Lagoon Selatan, Bandar Sunway, Petaling Jaya, Selangor, Malaysia,
,
Han Ming GanSchool of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor, Malaysia, ;Monash University Malaysia Genomics Facility, Jalan Lagoon Selatan, Bandar Sunway, Petaling Jaya, Selangor, Malaysia, Correspondence[email protected]
,
Mun Hua TanSchool of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor, Malaysia, ;Monash University Malaysia Genomics Facility, Jalan Lagoon Selatan, Bandar Sunway, Petaling Jaya, Selangor, Malaysia,
,
Isabelle LysSchool of Science, Faculty of Health Sciences, Australian Catholic University, Banyo, Queensland, Australia, and
,
Rachel PageSchool of Food and Nutrition, Massey University, Wellington, New Zealand
,
Beatrice Dias WanigasekeraSchool of Food and Nutrition, Massey University, Wellington, New Zealand
&
Christopher M. AustinSchool of Science, Monash University Malaysia, Jalan Lagoon Selatan, Bandar Sunway, Selangor, Malaysia, ;Monash University Malaysia Genomics Facility, Jalan Lagoon Selatan, Bandar Sunway, Petaling Jaya, Selangor, Malaysia,
show all
Pages 3333-3334 | Received 12 Jan 2015, Accepted 24 Jan 2015, Published online: 24 Feb 2015

References

  • Apte S, Smith PJ, Wallis GP. (2007). Mitochondrial phylogeography of New Zealand freshwater crayfishes, Paranephrops sp. Mol Ecol 16:1897–908
  • Austin CM, Tan MH, Croft LJ, Gan HM. (2014). The complete mitogenome of the freshwater crayfish Cherax cainii (Crustacea: Decapoda: Parastacidae). Mitochondrial DNA. [Epub ahead of print]. doi:10.3109/19401736.2013.878907
  • Crandall K, Buhay J. (2008). Global diversity of crayfish (Astacidae, Cambaridae, and Parastacidae—Decapoda) in freshwater. Hydrobiologia 595:295–301
  • Gan HM, Schultz MB, Austin CM. (2014a). Integrated shotgun sequencing and bioinformatcs pipeline allows ultra-fast mitogenome recovery and confirms substantial gene rearrangements in Australian freshwater crayfishes. BMC Evol Biol 14:19. doi:10.1186/1471-2148-14-19
  • Gan HM, Tan MH, Austin CM. (2014b). The complete mitogenome of the Australian spiny crayfish Euastacus yarraensis (McCoy, 1888) (Crustacea: Decapoda: Parastacidae). Mitochondrial DNA. [Epub ahead of print]. doi:10.3109/19401736.2014.926490
  • Gan HM, Tan MH, Austin CM. (2014c). The complete mitogenome of the red claw crayfish Cherax quadricarinatus (Von Martens 1868) (Crustacea: Decapoda: Parastacidae). Mitochondrial DNA. [Epub ahead of print]. doi:10.3109/19401736.2014.895997
  • Gan HM, Tan MH, Eprilurahman R, Austin CM. (2014d). The complete mitogenome of Cherax monticola (Crustacea: Decapoda: Parastacidae), a large highland crayfish from New Guinea. Mitochondrial DNA. [Epub ahead of print]. doi:10.3109/19401736.2014.892105
  • Gan, HM, Tan MH, Gan HY, Lee YP, Schultz MB, Austin CM. (2014e). The complete mitogenome of the Australian crayfish Geocharax gracilis Clark 1936 (Crustacea: Decapoda: Parastacidae). Mitochondrial DNA. [Epub ahead of print]. doi:10.3109/19401736.2014.919460
  • Gan, HM, Tan MH, Lee YP, Schultz MB, Austin CM. (2014f). The complete mitogenome of the Australian land crayfish Engaeus lyelli (Crustacea: Decapoda: Parastacidae). Mitochondrial DNA. [Epub ahead of print]. doi:10.3109/19401736.2014.908361
  • Hahn C, Bachmann L, Chevreux B. (2013). Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads—A baiting and iterative mapping approach. Nucl Acids Res 41:e129
  • Miller AD, Nguyen TT, Burridge CP, Austin CM. (2004). Complete mitochondrial DNA sequence of the Australian freshwater crayfish, Cherax destructor (Crustacea: Decapoda: Parastacidae): A novel gene order revealed. Gene 331:65–72
  • Peng Y, Leung HC, Yiu SM, Chin FY. (2012). IDBA-UD: A de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth. Bioinformatics 28:1420–8
  • Schultz MB, Smith SA, Horwitz P, Richardson AM, Crandall KA, Austin CM. (2009). Evolution underground: A molecular phylogenetic investigation of Australian burrowing freshwater crayfish (Decapoda: Parastacidae) with particular focus on Engaeus Erichson. Mol Phylogenet Evol 50:580–98
  • Toon A, Pérez-Losada M, Schweitzer CE, Feldmann RM, Carlson M, Crandall KA. (2010). Gondwanan radiation of the Southern Hemisphere crayfishes (Decapoda: Parastacidae): Evidence from fossils and molecules. J Biogeogr 37:2275–90

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