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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 27, 2016 - Issue 5
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Mitogenome Announcement

The complete plastid genome sequence of Picea jezoensis (Pinaceae: Piceoideae)

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Pages 3761-3763 | Received 29 Jul 2015, Accepted 02 Aug 2015, Published online: 02 Sep 2015

References

  • Cronn R, Liston A, Parks M, Gernandt DS, Shen R, Mockler T. (2008). Multiplex sequencing of plant chloroplast genomes using Solexa sequencing-by-synthesis technology. Nucleic Acids Res 36:e122
  • Farjón A. (2010). A handbook of the world’s conifers. Vols. 1–2. Leiden: EJ Brill
  • Farjón A. (1990). Pinaceae: Drawings and Descriptions of the Genera Abies, Cedrus, Pseudolarix, Keteleeria, Nothotsuga, Tsuga, Cathaya, Pseudotsuga, Larix and Picea. Königstein: Koeltz Scientific Books
  • Guo W, Grewe F, Cobo-Clark A, Fan W, Duan Z, Adams RP, Schwarzbach AE, et al. (2014). Predominant and substoichiometric isomers of the plastid genome coexist within Juniperus plants and have shifted multiple times during cupressophyte evolution. Genome Biol Evol 6:580–90
  • Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, et al. (2012). Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28:1647–9
  • Lin CP, Huang JP, Wu CS, Hsu CY, Chaw SM. (2010). Comparative chloroplast genomics reveals the evolution of Pinaceae genera and subfamilies. Genome Biol Evol 2:504–17
  • Lin CP, Wu CS, Huang YY, Chaw SM. (2012). The complete chloroplast genome of Ginkgo biloba reveals the mechanism of inverted repeat contraction. Genome Biol Evol 4:374–81
  • Nystedt B, Street NR, Wetterbom A, Zuccolo A, Lin YC, Scofield DG, Vezzi F, et al. (2013). The Norway spruce genome sequence and conifer genome evolution. Nature 497:579–84
  • Raubeson LA, Jansen RK. (1992). A rare chloroplast DNA structure mutation mutation is shared by all conifers. Biochem Syst Ecol 20:17–24
  • Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, Zaita N, et al. (1986). The complete nucleotide sequence of the tobacco chloroplast genome: Its gene organization and expression. EMBO J 5:2043–9
  • Vieira LdN, Faoro H, Rogalski M, Fraga HPdF, Cardoso RLA, de Souza EM, Pedrosa FdO, et al. (2014). The complete chloroplast genome sequence of Podocarpus lambertii: Genome structure, evolutionary aspects, gene content and SSR detection. PLoS One 9:e90618
  • Wakasugi T, Tsudzuki J, Ito S, Nakashima K, Tsudzuki T, Sugiura M. (1994). Loss of all ndh genes as determined by sequencing the entire chloroplast genome of the black pine Pinus thunbergii. Proc Natl Acad Sci USA 91:9794–8
  • Wang XQ, Tank DC, Sang T. (2000). Phylogeny and divergence times in Pinaceae: Evidence from three genomes. Mol Biol Evol 17:773–81
  • Wu CS, Chaw SM. (2014). Highly rearranged and size‐variable chloroplast genomes in conifers II clade (cupressophytes): Evolution towards shorter intergenic spacers. Plant Biotech J 12:344–53
  • Wu CS, Lai YT, Lin CP, Wang YN, Chaw SM. (2009). Evolution of reduced and compact chloroplast genomes (cpDNAs) in gnetophytes: Selection toward a lower-cost strategy. Mol Phylogenet Evol 52:115–24
  • Wu CS, Wang YN, Hsu CY, Lin CP, Chaw SM. (2011). Loss of different inverted repeat copies from the chloroplast genomes of Pinaceae and cupressophytes and influence of heterotachy on the evaluation of gymnosperm phylogeny. Genome Biol Evol 3:1284–95
  • Yi DK, Kim KJ. (2012). Complete chloroplast genome sequences of important oilseed crop Sesamum indicum L. PLoS One 7:e35872

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