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PAPERS

Interaction of a peptide corresponding to the loop domain of the S2 SARS-CoV virus protein with model membranes

, , &
Pages 236-248 | Received 20 Oct 2008, Published online: 09 Jul 2009
 

Abstract

The severe acute respiratory syndrome coronavirus (SARS-CoV) envelope spike (S) glycoprotein is responsible for the fusion between the membranes of the virus and the target cell. In the case of the S2 domain of protein S, it has been found a highly hydrophobic and interfacial domain flanked by the heptad repeat 1 and 2 regions; significantly, different peptides pertaining to this domain have shown a significant leakage effect and an important plaque formation inhibition, which, similarly to HIV-1 gp41, support the role of this region in the fusion process. Therefore, we have carried out a study of the binding and interaction with model membranes of a peptide corresponding to segment 1073–1095 of the SARS-CoV S glycoprotein, peptide SARSL in the presence of different membrane model systems, as well as the structural changes taking place in both the lipid and the peptide induced by the binding of the peptide to the membrane. Our results show that SARSL strongly partitions into phospholipid membranes and organizes differently in lipid environments, displaying membrane activity modulated by the lipid composition of the membrane. These data would support its role in SARS-CoV mediated membrane fusion and suggest that the region where this peptide resides could be involved in the merging of the viral and target cell membranes.

Abbreviations
16NS=

16-Doxyl-stearic acid

5NS=

5-Doxyl-stearic acid

BPS=

Bovine brain L-α-phosphatidylserine

CF=

5-Carboxyfluorescein

Chol=

Cholesterol

CoV=

Coronavirus

DMPG=

1,2-Dimyristoyl-sn-glycero- phosphoglycerol

DPH=

1,6-Diphenyl-1,3,5-hexatriene

EPA=

Egg L-α-phosphatidic acid

EPC=

Egg L-α-phosphatidylcholine

EPG=

Egg L-α-phosphatidylglycerol

ESM=

Egg sphingomyelin

FP=

Fusion peptide

FTIR=

Fourier-transform infrared spectroscopy

HIV-1=

Human immunodeficiency virus type 1

HR=

Heptad repeat region

LUV=

Large unilamellar vesicles

MLV=

Multilamellar vesicles

POPC=

1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine

POPE=

1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine

POPG=

1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol, POPS, 1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphoserine

PTM=

Pre-transmembrane domain

SARS=

Severe acute respiratory syndrome

SARSL=

Loop peptide of SARS

SIV=

Simian immunodeficiency virus

TFE=

Trifluoroethanol

Tm=

Main transition temperature

TM=

Transmembrane domain

Abbreviations
16NS=

16-Doxyl-stearic acid

5NS=

5-Doxyl-stearic acid

BPS=

Bovine brain L-α-phosphatidylserine

CF=

5-Carboxyfluorescein

Chol=

Cholesterol

CoV=

Coronavirus

DMPG=

1,2-Dimyristoyl-sn-glycero- phosphoglycerol

DPH=

1,6-Diphenyl-1,3,5-hexatriene

EPA=

Egg L-α-phosphatidic acid

EPC=

Egg L-α-phosphatidylcholine

EPG=

Egg L-α-phosphatidylglycerol

ESM=

Egg sphingomyelin

FP=

Fusion peptide

FTIR=

Fourier-transform infrared spectroscopy

HIV-1=

Human immunodeficiency virus type 1

HR=

Heptad repeat region

LUV=

Large unilamellar vesicles

MLV=

Multilamellar vesicles

POPC=

1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine

POPE=

1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine

POPG=

1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphoglycerol, POPS, 1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphoserine

PTM=

Pre-transmembrane domain

SARS=

Severe acute respiratory syndrome

SARSL=

Loop peptide of SARS

SIV=

Simian immunodeficiency virus

TFE=

Trifluoroethanol

Tm=

Main transition temperature

TM=

Transmembrane domain

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