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Research Article

Characterization of the Platelet-derived Growth Factor Receptor Alpha and c-kit Genes in the Pufferfish Fugu rubripes

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Pages 263-270 | Published online: 11 Jul 2009
 

Abstract

The receptor tyrosine kinase type III subfamily includes the PDGF receptors ( &#102 and &#103 ), c-kit and the colony stimulating factor 1 receptor (CSF1R). The similar genomic organization of the genes encoding these receptors and the observation that in mammals, the genes for PDGFR &#102 and PDGFR &#103 are tandemly linked with the c-kit and CSF1R genes, respectively, suggest that these genes arose from an ancestral receptor tyrosine kinase gene. We have previously cloned two copies each of the PDGFR &#103 and CSF1R genes from the pufferfish, Fugu rubripes, and shown that they are tandemly linked. We have now cloned the Fugu PDGFR &#102 and c-kit genes and show that they are also tandemly linked. The intergenic region between the two genes in the Fugu (13 kb) and humans (350 kb) contains a conserved 59 bp element, which may play a role in regulation. The Fugu PDGFR &#102 gene is transcribed from two promoters giving rise to alternate transcripts.

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