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Original Articles

Malazy, a degenerate, species-specific transposable element in Cercospora zeae-maydis

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Pages 349-355 | Accepted 19 Nov 2004, Published online: 27 Jan 2017
 

Abstract

Two fungal pathogens, Cercospora zeae-maydis Groups I and II, cause gray leaf spot of maize. During the sequencing of a cosmid library from C. zeae-maydis Group I, we discovered a sequence with high similarity to Maggy, a transposable element from Magnaporthe grisea. The element from C. zeae-maydis, named Malazy, contained 194-base-pair terminal repeats and sequences with high similarity to reverse transcriptase and integrase, components of the POL gene in the gypsy-like retrotransposons in fungi. Sequences with similarity to other POL gene components, protease and ribonuclease, were not detected in Malazy. A single copy of the element was detected by PCR and Southern analyses in all six North American isolates of C. zeae-maydis Group I but was not detected in the four isolates of C. zeae-maydis Group II from three continents or in phylo-genetically related species. Fragments of the core domains of reverse transcriptase and integrase contained a high frequency of stop codons that were conserved in all six isolates of Group I. Additional C:G to T:A transitions in occasional isolates usually were silent mutations, while two resulted in isolate-specific stop codons. The absence of Malazy from related species suggests that it was acquired after the divergence of C. zeae-maydis Groups I and II. The high frequency of stop codons and the presence of a single copy of the element suggest that it was inactivated soon after it was acquired. Because the element is inactive and because reading frames for other genes were not found in sequences flanking the element, Malazy does not appear to be the cause of differences leading to speciation or genetic diversity between C. zeae-maydis Groups I and II.

Research reported is a cooperative investigation of the U.S. Department of Agriculture Agricultural Research Service and the Purdue University Agricultural Experiment Station. Published as paper No. 16948, Purdue University Agricultural Experiment Station. The authors thank Mark McClenning and Carrie Lapaire for technical assistance. Names are necessary to report factually on available data. However the USDA neither guarantees nor warrants the standard of the product, and the use of the names implies no approval of the product to the exclusion of others that may also be suitable.

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