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Research Papers

Low HOX gene expression in PML-RARα-positive leukemia results from suppressed histone demethylation

, , , , , , & show all
Pages 73-84 | Received 15 Sep 2017, Accepted 22 Nov 2017, Published online: 07 Feb 2018
 

ABSTRACT

Homeobox (HOX) genes are frequently dysregulated in leukemia. Previous studies have shown that aberrant HOX gene expression accompanies leukemogenesis and affects disease progression and leukemia patient survival. Patients with acute myeloid leukemia (AML) bearing PML-RARα fusion gene have distinct HOX gene signature in comparison to other subtypes of AML patients, although the mechanism of transcription regulation is not completely understood. We previously found an association between the mRNA levels of HOX genes and those of the histone demethylases JMJD3 and UTX in PML-RARα- positive leukemia patients. Here, we demonstrate that the release of the PML-RARα-mediated block in PML-RARα-positive myeloid leukemia cells increased both JMJD3 and HOX gene expression, while inhibition of JMJD3 using the specific inhibitor GSK-J4 reversed the effect. This effect was driven specifically through PML-RARα fusion protein since expression changes did not occur in cells with mutated RARα and was independent of differentiation. We confirmed that gene expression levels were inversely correlated with alterations in H3K27me3 histone marks localized at HOX gene promoters. Furthermore, data from chromatin immunoprecipitation followed by sequencing broaden a list of clustered HOX genes regulated by JMJD3 in PML-RARα-positive leukemic cells. Interestingly, the combination of GSK-J4 and all-trans retinoic acid (ATRA) significantly increased PML-RARα-positive cell apoptosis compared with ATRA treatment alone. This effect was also observed in ATRA-resistant NB4 clones, which may provide a new therapeutic opportunity for patients with acute promyelocytic leukemia (APL) resistant to current treatment. The results of our study reveal the mechanism of HOX gene expression regulation and contribute to our understanding of APL pathogenesis.

Disclosure of potential conflicts of interest

No potential conflicts of interest were disclosed.

Authorship contributions

KR, KSK and MAJ performed experiments. AM, KF performed statistical analysis and analysis of ChIP-seq. JS designed the project and coordinated the study. JS, KR, JT and MZ wrote the paper and analyzed the data. All authors revised the manuscript and approved the final version.

Acknowledgement

We would like to thank Professor Eric So kindly providing us with resistant cell lines. This work was supported by the Grant Agency of the Czech Republic (P304/12/2214) (JS, JT); Supported by MH CZ – DRO, Motol University Hospital, Prague, Czech Republic 00064 203; KR was supported by the Grant Agency of Charles University GAUK 196 616.

Additional information

Funding

This work was supported by the Czech Science Foundation (grant number P307/12/2214); Charles University Grant Agency (grant number 196616) and the Ministry of Health (00064203 University Hospital Motol, Prague, Czech Republic).

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