Abstract
We study a population model where cells in one part of the cell cycle may affect the progress of cells in another part. If the influence, or feedback, from one part to another is negative, simulations of the model almost always result in multiple temporal clusters formed by groups of cells. We study regions in parameter space where periodic ‘k-cyclic’ solutions are stable. The regions of stability coincide with sub-triangles on which certain events occur in a fixed order. For boundary sub-triangles with order ‘’, we prove that the k-cyclic periodic solution is asymptotically stable if the index of the sub-triangle is relatively prime with respect to the number of clusters k and neutrally stable otherwise. For negative linear feedback, we prove that the interior of the parameter set is covered by stable sub-triangles, i.e. a stable k-cyclic solution always exists for some k. We observe numerically that the result also holds for many forms of nonlinear feedback, but may break down in extreme cases.
1. Introduction
1.1. Background
In biology, there are phenomena that may emerge when cells or other dynamical units are coupled and influence each other. One example is synchronization, a state in which units are progressing with identical or nearly identical coordinates. In this manuscript, we consider a related phenomenon, phase synchronization or temporal clustering, in which multiple groups (or clusters) of cells are synchronized. They have the same phase as the other cells in their group, but the phase differs from one group to another. Throughout this manuscript, ‘clustering’ will mean temporal clustering (not spatial clustering).
There is a huge literature about synchronization, but temporal clustering has been studied much less often. It was observed in models of connected neurons [Citation1,Citation14,Citation15,Citation20,Citation38] and models of coupled engineered biological oscillators [Citation11,Citation40]. Temporal clustering has been observed in some experiments, including coupled chemical oscillators based on the Belousov–Zhabotinski reaction [Citation34,Citation35] and engineered electrochemical arrays [Citation16,Citation17,Citation37].
Temporal clustering also has been observed in Yeast Metabolic Oscillations (YMO) experiments that exhibit stable periodic oscillations of budding yeast (Saccharomyces cerevisiae) between aerobic metabolism and anaerobic metabolism. These have been observed in experiments and studied for many years [Citation8,Citation12,Citation19,Citation21,Citation27,Citation31].
The Cell Division Cycle (CDC) of budding yeast is the cyclic process of cell growth and division. A correlation between YMO and bud index, fraction of cells budded, was presented very early [Citation19,Citation21], but the link between YMO and the CDC was unclear due to the fact that the periods of YMO were always shorter than the CDC times in the same experiments. The relationship between YMO and the CDC was mostly ignored until it was noted in genetic expression data [Citation18,Citation31] and investigators began calling such oscillations ‘cell cycle related’. Boczko et al. [Citation3] proposed that temporal clustering is the mechanism linking the metabolism and the CDC in these experiments. Temporal clustering with two clusters was observed in YMO experiments reported in Stowers et al. [Citation33] and Young et al. [Citation39] and it was postulated that cells are segregated into CDC synchronized clusters due to feedback effects on the CDC progression. They proposed that cells in some phase of the cell cycle might produce signalling agents or metabolic products and the levels of these chemicals may affect the growth rate of cells in some other parts of the cycle.
Population level models of the cell cycle that include the effect of such feedback between different parts of the cell cycle were proposed in Boczko et al. [Citation3] and Young et al. [Citation39]. It was observed in [Citation5] that clustering in these models is heavily related to a number theoretic relationship between the number of clusters k and other indices that characterize possible clustered solutions. The main goal of this manuscript is to prove a conjecture made in [Citation5] that for negative feedback, temporal clustering is universal, meaning that it happens for any parameters in the model.
1.2. A cell cycle population model, notations and previous results
We will represent the progress of a cell by a variable (phase) ; 0 is the beginning of the cell division cycle and 1 is the end of the cycle. We will identify 0 with 1 and consider as a normalized coordinate on the circle. We will let and where 0<s<r<1; see Figure . The model of progress of the ith cell in the cell cycle conceptualized in [Citation3] is as follows: (1) (1) where , (2) (2) We will assume that f is a monotone function satisfying and . It is perhaps nonlinear.
The key feature of the model is that cells in one part of the cycle (denoted by for signalling) influence the cells in another part ( for responsive). We postulate that the feedback is not direct from cell to cell, but is exerted through the influence of chemicals in the medium that are produced or perhaps consumed by cells in different regions of the cycle. The numbers 0<s<r<1 are fixed for a given application. We will treat them as parameters of the dynamical system. Previous work [Citation39] shows that the number of clusters in asymptotically stable solutions is strongly dependent on s and r.
We do not know how the coordinates of our model correspond to particular phases of the actual cell cycle and so it does not reflect specific biology. However, it is well established that different parts of the cell cycle produce, consume and react differently to different metabolites and other chemicals (see, e.g. [Citation7,Citation9,Citation13,Citation24–26,Citation36,Citation41]). A checkpoint, a phase of the cell cycle where progress may be arrested until sufficient conditions are satisfied [Citation13], is a natural candidate for a responsive phase (R in our model) with negative feedback. This particular mechanism was modelled and studied in [Citation22].
We note that the right-hand side of the differential equation (Equation1(1) (1) ) is piecewise constant. Solutions fail to be differentiable at discrete points in time, and the definition of solution must be generalized to continuous, piece-wise smooth solutions. This was addressed in [Citation39].
Figure provides a visualization of the system in model (Equation1(1) (1) ) for the case of n = 11 where 11 different locations of cells represent the state of each cell in the cycle.
Note that cells are identical in (Equation1(1) (1) ) and so if two cells have the same coordinates at some time , then they will coincide for all . A cluster will mean a group of cells whose coordinates are equal and the integer k will be the number of clusters.
When the cells are grouped in k clusters it is sufficient to consider only the k coordinates, of the clusters rather than the coordinates of all individual cells. It follows trivially that the progress of clusters is given by (3) (3) for , and I is again given by (Equation2(2) (2) ). If the k clusters all have the same number of cells, then the progress of evenly clustered solutions can be described by (Equation3(3) (3) ), with (4) (4) the fraction of clusters in the signalling region.
Next, we define a special class of periodic, evenly clustered solutions of the system (Equation3(3) (3) )–(Equation4(4) (4) ) that will be the main object of our study.
Definition 1.1
Let n be the total number of cells in the cycle and be a divisor of n, with n/k cells in each cluster. Suppose that there exists a smallest positive number d such that for all and . Then is called a k-cyclic solution.
The existence of k-cyclic solutions was proved in [Citation6,Citation39]: For any and any pair , if k is a divisor of n, then a k-cyclic solution exists consisting of n/k cells in each cluster. For negative f and a given pair , the k-cyclic solution is unique, up to a translation in time.
The main result of this manuscript is that for negative linear feedback, given any pair of parameters , 0<s<r<1, there is a such that the unique k-cyclic solution corresponding to is (locally) asymptotically stable. In order to prove this result, we will first establish new results about stability of k-cyclic solutions for in certain subsets. This will require the introduction of quite a bit of terminology.
Let denote the initial condition of and let . For a solution with an initial condition in , let be the shortest positive time required for to return back to its starting position, 0; i.e. when the solution returns to . The Poincaré map for the flow (Equation3(3) (3) )-(Equation4(4) (4) ) is defined as follows: (5) (5) Because we have assumed that , this Poincaré map is well defined.
Definition 1.2
We define a map F by (6) (6) where is the shortest time required for to reach 1.
It was noted that the map is conjugate to the Poincaré map Π [Citation39]. Further, if is a fixed point of F, then is the initial condition of a k-cyclic solution of (Equation3(3) (3) )–(Equation4(4) (4) ) and vice versa. Moses [Citation23] showed that for k even clusters, asymptotic stability in the k clustered phase space implies asymptotic stability in the full phase space of n cells, i.e. system (Equation1(1) (1) )–(Equation2(2) (2) ). Thus, to study the stability of any k-cyclic solution, it is sufficient to study the stability of the fixed points of F.
Note that can be considered as a (closed) simplex. The map F is defined on the interior of the simplex, i.e. on . It was shown in [Citation39] that the map F can be extended continuously to the boundary of the simplex and that this continuously extended F permutes components of the boundary of the simplex.
Define σ to be the number of clusters in at the initial time and define ρ to be the number of clusters in (outside of R) at the initial time. That is, (7) (7) According to Equations (Equation3(3) (3) )–(Equation4(4) (4) ), clusters may change their rate only when one of them reaches or 1 which we call events s, r and 1, respectively.
Definition 1.3
Let be a solution whose initial condition satisfies (Equation7(7) (7) ). Then, reaching s is called the event , reaching r is called the event , reaching 1 is called the event. A sequence means that the clusters progress with an order of events , and , respectively. If two or three events happen at the same time, we say that the solution has simultaneous events.
The sequence of events followed by a cyclic solution is periodic and either or or has simultaneous events [Citation5]. Thus, if we wish to study the stability of cyclic solutions, we need only to consider two periodic sequences of events, or .
We will call the set of points the parameter triangle .
Definition 1.4
A subset is called isosequential for k if the k-cyclic solution corresponding to each parameter pair in the interior of τ has the same σ and ρ and the same order of events:
,
.
That is, and are regions on which the k-cyclic solutions have the order of events sr1 or rs1, respectively. Figure shows indices of isosequential regions for the case of k = 3. Isosequential regions are in fact sub-triangles [Citation5]. Figure illustrates that the relative positions of the parameters and the clusters of the cyclic solution determine the order of events.
Isosequential regions are important because it was shown in [Citation5] that all the k-cyclic solutions for in one of these sub-triangles have the same stability type. We will call a sub-triangle stable if all the k-cyclic solutions corresponding to points in the region are asymptotically stable. An isosequential region will be called unstable if all the k-cyclic solutions corresponding to points in the region are unstable. An isosequential region is called neutral if all the k-cyclic solutions corresponding to points in the region are neutrally stable (stable, but not asymptotically stable). In the context of k-cyclic solutions, stable means that initial conditions near the orbit of the periodic solution will remain near the orbit for all forward time. Asymptotic stability means that nearby solutions not only remain in a neighbourhood of the periodic orbit but also converge to the periodic orbit in forward time.
A point is called a simultaneous point if the k-cyclic solution has events , and occurring simultaneously. Note that if is a simultaneous point, then the initial condition (assumed to be in ) of the k-cyclic solution has one cluster located at s and another one at r. For any f and integer isosequential regions are sub-triangles with simultaneous points at their corners [Citation5]. In the interior of each sub-triangle, all k-cyclic solutions have the same order of events and same stability.
We define the following:
and are called vertical sub-triangles
and are called horizontal sub-triangles
and are called oblique sub-triangles
all the rest are called interior sub-triangles.
Next we review previous results about the stability of cyclic solutions.
The vertical and horizontal boundary sub-triangles with order of events sr1, i.e. and , were shown to be neutral for any in [Citation5].
For horizontal and vertical sub-triangles with order , if or , respectively, the sub-triangle is stable for negative feedback. If or , then the sub-triangle is neutral.
For positive feedback, all interior sub-triangles are unstable and for negative feedback all interior sub-triangles with the order sr1 are unstable [Citation2,Citation23].
In conclusion, stability under negative and positive feedbacks of the vertical and horizontal sub-triangles was fully investigated in earlier works. However, stability of the oblique sub-triangles has not been previously analysed. The oblique sub-triangles are indexed by and where . All results that had been established previously are shown in Figure for the case of k = 8 where stability of the white sub-triangles has not been investigated before. In this manuscript, we prove that the stability of the oblique triangles follows a similar pattern as the vertical and horizontal sub-triangles.
1.3. Main results
As discussed above, the stability of the vertical and horizontal sub-triangles was completely investigated, but the stability of the oblique sub-triangles was open. The ideas presented in Section 3 complete the study of stability of boundary sub-triangles. The stable sub-triangles are those with order of events rs1 and whose index is relatively prime with respect to the number of clusters k. Results in Section 3 can be combined into the following which was conjectured in [Citation5].
Theorem A
Consider the system (Equation3(3) (3) )–(Equation2(2) (2) ) with any negative, non-increasing, feedback function . For , all triangles with edges on the boundary (order ) of are neutral. Boundary triangles with order of events are either neutral or stable. If we number them by an index i, then a sub-triangle is stable if k and i are relatively prime and neutral otherwise.
This result is illustrated in Figure for k = 8. The grey (sr1) and white (rs1) areas in Figure are neutral. The blue shaded areas (rs1) in Figure are stable.
Our method not only clarifies the stability of oblique sub-triangles but also provides an alternative proof for the vertical and horizontal sub-triangles. We establish these results by analysing all eigenvalues of the Jacobian matrix of the map F corresponding to points in each isosequential region.
In Section 5, we prove our main result, which is the following.
Theorem B
For any negative linear feedback , c<1, and any pair in the interior of the triangle 0<s<r<1, there is a positive integer k, , such that the k-cyclic solution corresponding to is stable.
This result is important because it means that negative linear feedback systems of this type will always possess an asymptotically stable clustered periodic solution, irrespective of the values of parameters.
This was conjectured more generally in [Citation5]. Numerically, this result appears to hold also for non-linear negative feedback, except possibly for some extreme cases. (See the last section for discussion.)
In Section 4. we prove a version of Theorem thmB in the case of the zero feedback limit where the main ideas are more clear.
These results appeared in expanded form in the dissertation of the first author [Citation28].
2. Some preliminaries
We introduce the following notations that will be used for the rest of this manuscript. Note that for negative feedback, .
2.1. Order of events rs1
Suppose that and let be a solution of (Equation3(3) (3) )–(Equation4(4) (4) ) such that its initial condition (where ) satisfies (Equation7(7) (7) ) and (8) (8) This condition implies that the solution has order of events rs1.
Recall that as defined in (Equation6(6) (6) ). Formulas for F and its derivative DF were calculated in [Citation2]. Specifically, is defined by the following. The determinant of was calculated to be which is less than one in absolute value since . For , eigenvalues of for sub-triangles satisfy the equation (9) (9) and 1 is not an eigenvalue [Citation2].
2.2. Order of events sr1
Consider a k-clustered solution with order of events sr1. Then, its initial condition satisfies (10) (10) At the time , [Citation2] obtained the solution This defines the map . The Jacobian matrix of the map DF for the order of events sr1 was shown in [Citation2] to be the following: We note that this implies that k cyclic solutions with order cannot be asymptotically stable. For , eigenvalues of for sub-triangles satisfy the equation (11) (11) and 1 is not an eigenvalue [Citation2].
Recall that for a complex number, z = x + iy, an argument of z, , is a number such that and , where . Figure shows the general picture of , , and for given . The argument of is the angle between the line from z to and the horizontal line passing .
The following lemma might be a known fact, but since we cannot find it in the literature, we state it here.
Lemma 2.1
Let A be the smaller open arc of bounded by and and θ be the angle of the arc A. Let be the complex conjugates of a and b, respectively. If , (depending on the location of the arc A). If , (depending on the location of the arc A).
We will use the following theorem found in [Citation4] repeatedly.
Theorem 2.2
[Citation4]
All roots of the polynomial , and for , are in the interior of the unit ball if and only if
,
the zeros of and are simple, lie on and the zeros of alternate with the zeros of .
The following lemma will help us when we use Theorem 2.2.
Lemma 2.3
Let and be real monic polynomials of even degree n with their zeros contained in . Let be zeros of and be zeros of , where () and Let be the smaller open arc of bounded by and for . Let θ be a real number such that . If the arcs are pairwise disjoint and each element of has a complex conjugate in (), then there is exactly one zero of (12) (12) in each for any positive real number .
Proof.
The key idea of this proof is found in [Citation10].
First, let and . Assume that the arcs are disjoint and each element of has a complex conjugate in (). Define a function (13) (13) For fixed , we claim that is a continuous real-valued function on each arc . Let . Consider Let be the angle of the arc . By Lemma 2.1, Thus . This implies is a negative real number. For and , Lemma 2.1 implies Thus . This implies is a positive real number. Hence, is a negative real number, so for any . Then, is a continuous real-valued function of λ on the arc . Since has the values 0 and 1 at the endpoints of the arc , must take all values between 0 and 1 on the arc . By the Intermediate Value Theorem, there exists such that . Then, This implies that so z is a zero of (Equation12(12) (12) ). This means that there exists a zero of (Equation12(12) (12) ) in each for . Since there are n different zeros of (Equation12(12) (12) ), there is exactly one zero of (Equation12(12) (12) ) in each .
In the case that , we consider instead of in (Equation13(13) (13) ) and proceed with the same method.
3. Classification of sub-triangles for negative feedback
Note that for a positive integer k except at . Recall also that we define , where and . For a negative feedback system, we have . For the reader's convenience, we provide a table of symbols in Appendix.
We now consider the stability of oblique sub-triangles.
Theorem 3.1
For negative feedback and , If , then the sub-triangles are asymptotically stable, where .
Proof.
By substituting in Equation (Equation9(9) (9) ), eigenvalues of for sub-triangle satisfy and 1 is not an eigenvalue. Let . In a negative feedback system, we get . Let (14) (14) Our claim is that all roots of satisfy . We will use Theorem 2.2 to obtain the claim. First, multiply both sides of (Equation14(14) (14) ) by , Thus (15) (15) Note that is equal to a polynomial of degree k−1, except at . Since we consider in (Equation15(15) (15) ), we have , so we can refer to both as . The constant term of is 1 and the leading coefficient of is . Since , we achieve the first condition of Theorem 2.2.
Let (16) (16) Then (17) (17) Next, we compute and . Since we get Hence, (18) (18) Similarly, (19) (19) To check the second condition of the theorem, we consider two cases of the integer k: it is an odd number and it is an even number.
Case I: k is an odd number.
In this case, can be either an odd or even number. Note that regardless of whether is an odd number or an even number, is a zero of . If is an odd number, then is a zero of since σ is must be an even number, see (Equation16(16) (16) ). If is an even number, is a zero of , see (Equation16(16) (16) ). Since and k is an odd number, we can write where , and are in , , and for and . Let be the smaller arc of bounded by and for . We use the following lemma which we will prove later.
Lemma 3.2
For every , the arc contains at most one zero of .
Since there are k−2 zeros of , by Lemma 3.2 each arc contains exactly one zero of . We obtain that for each i. We may write (20) (20) Let be the smaller open arc of bounded by
and , for ,
and for ,
and for .
Case II: k is an even number.
In this case, σ and are odd numbers and Let Note that and have no common zeros and they both have the same degree k−2, which is an even number. We write where , , and for . Note that and . Let be the smaller arc of as follows:
is bounded by and for
is bounded by and
is bounded by and
is bounded by and for .
Proof
Proof of Lemma 3.2
Let . Suppose that the arc contains more than one zero of , say has two zeros inside the arc . Note that the angle of the arc is greater than the angle of the arc bounded by the two zeros. Then, one of the two zeros is a zero of and another zero is a zero of . Let and be the two zeros, say is a zero of and is a zero of . Then, there are and such that Since and are contained in arc , This implies the following: (21) (21) These inequalities are equivalent to (22) (22) Adding the inequalities in (Equation22(22) (22) ), we get (23) (23) Then, l<q + r<l + 1 is a contradiction since q and r are integers.
Figure shows stable sub-triangles (blue shaded sub-triangles) for k = 12 with respect to feedback function . Since the sub-triangles , , and are asymptotically stable by Theorem 3.1, see Figure .
The following theorem was proved in [Citation23] with a different method.
Theorem 3.3
For negative feedback and , If , then sub-triangles and are asymptotically stable, where .
Proof.
By substituting and in (Equation9(9) (9) ), the eigenvalues of for the region satisfy (24) (24) where . This is equivalent to (25) (25) Since , no zero of Equation (Equation24(24) (24) ) lies on the unit circle; i.e.. If , then by (Equation25(25) (25) ) (26) (26) a contradiction. Hence, and then the region are stable.
Next, the eigenvalues of for the sub-triangle satisfy By simplifying, we have (27) (27) This is equivalent to (28) (28) Note that since , no solution of quation (Equation27(27) (27) ) lies on the unit circle; i.e. . If , then by (Equation28(28) (28) ) (29) (29) a contradiction. Hence, the sub-triangle is stable.
The next corollary is proved by similar ideas as in the proofs of Theorem 3.1. In this corollary, there are some eigenvalues of lying on the unit disc, .
Corollary 3.4
For negative feedback with the order of events and , the following statements hold.
If , then triangle regions and are neutrally stable.
If , then triangle regions are neutrally stable,
Proof.
Note that (Equation24(24) (24) ) and (Equation27(27) (27) ) are characteristic polynomials for and , respectively.
Since , there is a solution of (Equation24(24) (24) ) that lies on the unit circle. If , we get a contradiction as shown in (Equation26(26) (26) ). Hence, all solutions of (Equation24(24) (24) ) satisfy . Thus the regions are neutrally stable.
Equation (Equation27(27) (27) ) and the condition that imply that there is a solution of (Equation27(27) (27) ) on the unit circle. If , we get a contradiction as shown in (Equation29(29) (29) ). Hence, all solution of (Equation27(27) (27) ) satisfy . We then obtain that are neutrally stable.
Suppose that . We consider (Equation15(15) (15) ) in the proof of Theorem 3.1, Since , we have and Let Then, . We claim that all zeros of lie in the unit disc. When the claim holds, it follows that no zero of is outside the units disc, i.e. . Therefore, are neutrally stable. Since , the function is a polynomial function of degree k−n and satisfies the first condition of Theorem 2.2. Let Then, (30) (30) Next, we compute and defined in Theorem 2.2. Since we get Hence, (31) (31) Similarly, (32) (32) To check the second condition of Theorem 2.2, we consider three cases: k is an odd number, k is an even number and n is an odd number, and, k and n are both even.
Case I: k is an odd number.
This case implies that n is an odd number. Then k−n is an even number. Since σ and cannot be both odd numbers in this case, is a zero of . By our construction, and have no common zero. We can write where , and are in , , and for and . Now, we write Let be the smaller open arc of bounded by
and , for ,
and for ,
and for .
Case II: k is an even number and n is an odd number.
In this case, σ and are odd numbers, k−n is an even number, and we have Let Note that and have no common zeros and they both have the same degree k−n−1, which is an even number. We write where , , and for . Note that and . Let be the smaller arc of bounded by and for . Lemma 2.3 implies has exactly one zero in each . Hence, all zeros of lie on and the zeros of alternate with the zeros of for all . By Theorem 2.2, all zeros of are in the interior of the unit disc for all .
Case III: k and n are even numbers.
In this case, σ, , and k−n are even numbers, and we have Let Note that and have all zeros on and they have no common zeros. Both and have the same degree k−n, which is an even number. We write where , , , and for . Now, let be the smaller arc of bounded by and for . Then, are disjoint and each element of has a complex conjugate in (). Lemma 2.3 implies that has exactly one zero in each . Hence, all zeros of lie on and the zeros of alternate with the zeros of for all . Therefore, all zeros of are in the interior of the unit disc for all .
We prove the following lemma to investigate stability of the boundary sub-triangles corresponding to order of events .
Lemma 3.5
Let k and σ be positive integer satisfying and let and , where k + 1−n−m is an even number. Let If and have no common zeros and are not their zeros, then the function has all zeros on the unit disc for all .
Proof.
We write where , , and for . Now, let be the smaller arc of bounded by and for . Then, are disjoint and each element of has a complex conjugate in for . If , Lemma 2.3 implies that has exactly one zero in each for . Hence, all zeros of lie on .
Theorem 3.6
For negative feedback with order of events and , all boundary sub-triangles , and , are neutrally stable. In particular, all eigenvalues of for these triangles lie on the unit circle, .
Proof.
If we substitute or in (Equation11(11) (11) ), the left-hand side of (Equation11(11) (11) ) becomes zero. Thus the eigenvalues of for the regions and satisfy Thus all eigenvalues of for and lie on the unit circle. Hence, and are neutrally stable.
Next, let . By substituting in (Equation11(11) (11) ), we obtain that the eigenvalues of for sub-triangle satisfy (33) (33) Then, Let and . Then, If , then there are such that , , and . Then, , so . Thus q = 1. Hence, . We claim that has all zeros on the unit disc. There are three possible cases for the variables and m as follows:
k is odd. This case n, m, σ and are odd numbers.
k is even and n is odd. Since and n is odd, we have that is odd. Then, σ is even. Since , it follows that m is even. In this case, are even numbers and are odd numbers.
k and n are even. Since and n is even, it follows that m is odd. Then, σ is odd due to and k is even. We then get that is odd. In this case, k and n are even numbers and are odd numbers.
In this case, we obtain that k + 1−n−m is an even number. Moreover, and have no common zeros and are not their zeros. By Lemma 3.5, all zeros of lie on .
Case II: are even numbers and are odd numbers.
By Lemma 3.5, all zeros of lie on .
Case III: k and n are even numbers and are odd numbers.
By Lemma 3.5, all zeros of lie on .
From this proof, we also get the following corollary:
Corollary 3.7
Let k and σ be positive integers satisfying and let . The equation has all solutions on the unit disc.
Thus we have neutrality of boundary triangles, not only for negative feedback but also for positive feedback, provided .
The results in this section identify the location of all asymptotically stable and neutrally stable regions for the boundary sub-triangles. See Figure for an illustration.
We illustrate stability regions of the boundary sub-triangles under negative feedback in Figures and . For a given feedback function and a given k, a program computes vertices of each boundary sub-triangle and uses the results in the previous section to check stability of each sub-triangle. The vertices of each sub-triangle can be computed by a formula presented in the next section.
Figure shows the stability of boundary sub-triangles of for the case of k = 10 with different negative feedback functions.
In Figure , we show stability regions for the cases of k = 23 (prime) and k = 24 (composite) under the different negative feedback functions.
We see in these figures that for different feedback functions, the pattern of stability persists, while the sub-triangles become skewed.
4. The universality of cyclic solutions
In the previous section, we identified which boundary sub-triangles are (asymptotically) stable and which are neutral. In this section, we study how the sub-triangles fit together. For a given linear negative feedback, we prove that the interior of the is covered by the asymptotically stable sub-triangles.
Previously, we saw that an isosequential region has a triangular shape inside and its vertices are simultaneous points [Citation5].
We first find the formula of each simultaneous point. A simultaneous point is a point in such that the k-cyclic solution corresponding to the point satisfies the following:
it has events s, r, and 1 occurring simultaneously,
the solution at the initial time has σ clusters in the S region and it has ρ clusters outside the R region.
Let be the k-cyclic solution that corresponds to . We will continue to use . Then, the k-cyclic solution at the initial time satisfies that and . The clusters outside the R region are equally distributed by a distance d (as in Definition 1.1 of k-cyclic solution) and the clusters inside the R region are equally distributed by a distance called , see Figure . It follows that . Note that distances outside of R correspond directly to time. Let be the time required for to reach and be the time for to reach 1. We will seek conditions for . Recall that . Thus If we require and since , we have Thus (34) (34) We now consider the case of no feedback, i.e. for all I. We include this section in order to illustrate some of the main ideas of the proof of Theorem B in a context that is more clear.
With zero feedback, events and isosequential regions are still defined. The formula of each simultaneous point, (Equation34(34) (34) ), for becomes simply (35) (35)
Definition 4.1
Let k, σ and ρ be positive integers such that and . A sub-triangle is a relatively prime sub-triangle if . If , sub-triangles and are also called relatively prime sub-triangles.
For nonzero negative feedback, relatively prime sub-triangles are the ones that are stable as shown in Theorems 3.1 and 3.3.
The next lemma is the main idea of the proof. It states that if a boundary triangle is not relatively stable, then it is included entirely inside a larger boundary triangle that is relatively prime. This idea is illustrated in Figure .
Lemma 4.2
Let and . Let , , , and . Then (36) (36) (37) (37) (38) (38)
Proof.
First, we will prove (Equation36(36) (36) ). By (Equation35(35) (35) ), it follows that .
In Figure , since the slope and , it follows that . Similarly, we can show that and
For the rest of this section, we assume zero feedback, .
Note that , and are relatively prime sub-triangles. Figure illustrates that all boundary sub-triangles corresponding to order of events rs1 for the case of k = 12 are covered by the relatively prime sub-triangles for . In the figure,
(the yellow sub-triangle),
(a black sub-triangle),
(a green sub-triangle).
Let and let be the triangle which has vertices , , (see Figure ). Then, the following lemma is obvious.
Lemma 4.3
Consider a zero feedback system. Let be a point in the parameter triangle . Then there exist a positive integer and such that the point is in the triangle .
Note here that the following statements hold for :
are on the line ,
are on the line ,
are on the line ,
The next lemma is the second important idea of the proof. We use induction on k to show that for each k, the ‘gap’ is covered by relatively prime sub-triangles. Specifically, the gap is covered by boundary triangles of the form and . While not all of these triangles are relatively prime, they are all included perfectly in a larger relatively prime sub-triangle by Lemma 4.2.
Lemma 4.4
Consider a zero feedback system. For a positive integer , is covered by relatively prime sub-triangles.
Proof.
We prove this lemma by induction on k. For k = 3, which is a relatively prime sub-triangle. Suppose that is covered by relatively prime sub-triangles. It suffices to find a relatively prime covering of the gap between and , that is the region . The gap can be considered as composed of the vertical, horizontal and diagonal gaps. First, we consider the vertical gap between and . Let j be a positive integer such that . Let A be the point on the lines and and B be the point on the lines and , and C be the point on the lines and . We will show below that is covered by the triangle . See Figure for a visualization of .
Note that, (39) (39) By the definition of points A, B and C, we get Moreover, the following inequalities hold: (40) (40) This inequality implies that the r-coordinate of A is greater than or equal . Since (41) (41) it follows that the slope of line passing and B is less than or equal to 1. Hence, (Equation39(39) (39) ), (Equation40(40) (40) ), and (Equation41(41) (41) ) imply that is covered by the sub-triangle , see Figure . Since is covered by relatively prime sub-triangle (see (Equation36(36) (36) ) in Lemma 4.2), the entire vertical gap between and is covered by relatively prime sub-triangles. A similar idea can be used for the horizontal gap.
Next, we consider the oblique gap, the area inside bounded above by and bounded below by , see Figure . Let j be a positive integer such that . Let a be the point on the lines and and b be the point on the lines and , and c be the point on the lines and . We claim that is covered by triangle . See Figure as a visualization of . Note that (42) (42) We get the formulas for the point a, b, c as follows: Inequality (Equation42(42) (42) ) implies that the s-coordinate of c is less than or equal to . By inequality (Equation40(40) (40) ), we have that the r-coordinate of a is greater than or equal to . Hence, in Figure is covered by triangle .
Combining Lemmas 4.3 and 4.4, we get the following main theorem.
Theorem 4.5
Consider a zero feedback system. Let be a point in the parameter triangle . Then there exist a positive integer such that the point is in the interior of a relatively prime sub-triangle with respect to the positive integer k.
Figure shows that the union of all relatively prime boundary sub-triangles for (left panel) covers a large portion of the interior of and for nearly all of is covered.
5. Covering under negative linear feedback
In this section, treat negative linear feedback function, for .
In the previous section, we have proved under the zero feedback that the parameter triangle is covered by relatively prime sub-triangles. The main idea was that boundary sub-triangles that are not relatively prime are included perfectly in larger relatively prime sub-triangles. This fact was used to show that the gap between and is covered by a union of relatively prime sub-triangles.
The calculation here is more complicated since the right angle triangles in Section 4 become a scalene triangles under negative linear feedback and Equations (Equation36(36) (36) ) and (Equation37(37) (37) ) in Lemma 4.2 no longer hold. Only the oblique boundary sub-triangles still have this property (Theorem 5.5). For vertical and horizontal sub-triangles, there are thin slices that are not covered by the same larger triangles as in the zero feedback case. The first technical difficulty is showing that these slices are in fact covered by other relatively prime sub-triangles (Lemma 5.9). The second difficulty is showing that these skewed sub-triangles fit together nicely to cover the gap, which is bounded by skewed lines (Lemma 5.10).
Using Equation (Equation34(34) (34) ), the formula for a simultaneous point is as follows: (43) (43) From this formula, we obtain the following four propositions.
Proposition 5.1
Consider a negative linear feedback system. Let σ and k be positive integers such that . A simultaneous point for is a point on the line
This proposition provides the fact that all simultaneous points lie on the same line for fixed σ and , see Figure (the black line).
Proposition 5.2
Consider a negative linear feedback system. Let ρ and k be positive integers such that . A simultaneous point for is a point on the line
This proposition provides the fact that all simultaneous points lie on the same line for fixed ρ and , see Figure (the blue line).
Proposition 5.3
Consider a negative linear feedback system. Let ρ and k be positive integers such that . The slope of the line passing through and is greater than 1.
Proposition 5.4
Consider a negative linear feedback system. Let σ and k be positive integers such that . The slope of the line passing through and is less than 1.
The next result clarifies that any oblique sub-triangle corresponding to the order of events rs1 is covered by stable sub-triangles.
Theorem 5.5
Let f be a negative linear feedback function, where . For any integer and , where n is a divisor of σ and k.
Proof.
Let n be a positive divisor of σ and k. By (Equation43(43) (43) ), we get . Let be the slope of the line connecting and , be the slope of the line connecting and , be the slope of the line connecting and , and be the slope of the line connecting and , see Figure . Using (Equation43(43) (43) ), the slopes , , and are as follows: and Therefore,
Figure is a visualization of Theorem 5.5 for the case of k = 12 and . The figure indicates that each oblique sub-triangle corresponding to the order of events rs1 for the case of k = 12 and is exactly covered by a stable sub-triangle for some .
Definition 5.6
Let k be a positive integer such that . Define to be the triangle bounded by three line segments defined as follows:
the line passing through and (vertical boundary of ),
the line passing through and (horizontal boundary of ),
the line passing through to (oblique boundary of ).
Figure is a visualization of . For a negative linear feedback function with , the bounding lines in the sr-plane of the triangle satisfy:
, vertical boundary,
, horizontal boundary,
, oblique boundary.
The next lemma deals with the gap along the vertical boundary.
Lemma 5.7
Let f be a negative linear feedback function, where . For and , the region is covered by stable sub-triangles.
Proof.
If , then sub-triangle is a stable sub-triangle by Theorem 3.3. Thus the theorem holds. Assume that . Let , and be the lines as follows:
is the line passing through and ,
is the line passing through and ,
is the line passing through and ,
is the line passing through and ,
is the line passing through and .
Note that . By (Equation43(43) (43) ), , and . Then . Hence, is partially covered by stable sub-triangle . Specifically, can be considered as having two distinct parts; the part that intersects (the blue shaded area in Figure ) and the part that intersects (the red shaded region in Figure ). The blue shaded area is covered by the stable triangle . We claim that the red shaded area is covered by another stable sub-triangle. There are two cases depending on ρ to show that the red shaded area in Figure is covered by a stable sub-triangle.
Case I: .
Consider sub-triangle where . We claim that the red shaded area is a subset of .
Let and be the following lines:
is the line passing through and ,
is the line passing through and ,
is the line passing through and .
To get the claim, we need to show that and the r-coordinate of A is greater than the r-coordinate of B. By (Equation43(43) (43) ), the slopes of , and are as follows: It follows that . The point A is the solution of the systems Then, the r-coordinate of A is (44) (44) The point B is the solution of the systems Then, the r-coordinate of B is We claim that . By simplification, it is equivalent to show that (45) (45) Since and , the inequality (46) (46) implies the inequality (Equation45(45) (45) ). Note that , so . Then, (47) (47) implies the previous inequality. The left-hand side of the inequality (Equation47(47) (47) ) can be considered as a quadratic polynomial with variable c and fixed k. Then, the following properties hold:
coefficient of is nonnegative,
slope of the polynomial is negative at c = 0 and 1,
the values of the function are positive at c = 0 and 1.
Case II: .
In this case, we construct a sub-triangle where . We claim that the red shaded area is a subset of . Let D be the line and the line passing through and . Let and be slopes of the lines as follows:
is the slope of the line passing through and ,
is the slope of the line passing through and ,
is the slope of the line passing through and ,
The following result addresses the gap along the horizontal boundary.
Lemma 5.8
Let f be a negative linear feedback function, where . For and , is covered by stable sub-triangles.
Proof.
Let , , and . We consider as having two distinct parts; the part that intersects and the part that intersects . Since is stable by Theorem 3.3, we need to show that (the blue shaded region in Figure ) is covered by a stable sub-triangle. The proof will be separated into two cases, and .
Case I: . Let , and be the following points:
is the crossing point between and ,
is the crossing point between and the line passing through and ,
is the crossing point between and ,
is the crossing point between and .
By the definitions of the points and , we get It follows that for . Since we get Case II: . In this case, we claim that the blue region in Figure is covered by . Let be the crossing point between and the line passing through and . We claim that the s-coordinate of point is less than the s-coordinate of point . Figure is a visualization of this claim. By Proposition 5.1 and the definition of , we get Let . Then, Since A<0, it follows that This inequality implies that . Therefore, the blue regions covered by stable sub-triangles.
Combining the previous lemmas, we have that sub-triangles in all gaps are covered.
Lemma 5.9
Let f be a negative linear feedback function, where . For and , , and are covered by stable sub-triangles.
The following will confirm that (defined in Definition 5.6) is covered by stable sub-triangles.
Lemma 5.10
Let f be a negative linear feedback function, where . For , is covered by stable sub-triangles.
Proof.
This lemma will be proved by induction. For k = 3, is shown in Figure , where point A is , point B is the solution of and , and point C is the solution of and . Then, Thus the points A, B, C are in a stable sub-triangle , i.e. the stable sub-triangle for k = 2.
It suffices for the inductive step to show that the gap between and , see Figure , is covered by stable sub-triangles. We separate the gap between and into three parts as follows:
The vertical gap is the area bounded by four lines: the line passing through and , the line passing through and , the line passing through and , and the line passing through and .
The horizontal gap is the area bounded by four lines: the line passing through and , the line passing through and , the line passing through and , and the line passing through and .
The oblique gap is the area bounded by four lines: the line passing through and , the line passing through and , the line passing through and , and the line passing through and .
First, we consider the vertical gap and let .Let . Let and be lines as follows:
is the line passing through and ,
is the line passing through and ,
is the line passing through and ,
is the line passing through and .
Claim 1
The slope of the line passing through and is less than or equal 1.
Claim 2
The r-coordinate of is greater than the r-coordinate of , i.e. .
We first prove Claim 1. By (Equation43(43) (43) ), it follows that is the solution of (50) (50) Then, the r-coordinate of is (51) (51) Let be the s-coordinate of . Since , to prove Claim 1 we need to show that This inequality is equivalent to by using (Equation50(50) (50) ). It is the same as showing (52) (52) Since (Equation51(51) (51) ) provides the exact value of , showing (Equation52(52) (52) ) is equivalent to prove (53) (53) It is equivalent to showing (54) (54) Since and , the inequality (55) (55) implies (Equation54(54) (54) ). By multiplying to (Equation55(55) (55) ) and simplifying, we get (56) (56) This inequality holds for . Hence, Claim 1 holds.
Next, we will prove Claim 2, i.e. the r-coordinate of is greater than the r-coordinate of . Let and be the r-coordinates of and , respectively. By (Equation43(43) (43) ), is the solution of Then, Point is the solution of Then, Showing is equivalent to prove the following inequality: (57) (57) This inequality is equivalent to (58) (58) The left-hand side of (Equation58(58) (58) ) is a quadratic polynomial function in variable c where . The polynomial satisfies the following:
the coefficient of is negative,
the slopes at c = 0 and c = 1 are both negative,
its values at c = 0 and c = 1 are both positive.
Next, we consider the horizontal gap and let . Let . Let , and be lines as follows:
is the line passing through and ,
is the line passing through and ,
is the line passing through and .
By Lemma 5.9, the regions and (the blue shaded areas in Figure ) are covered by stable sub-triangles. We claim that the region bounded by , and (the red shaded triangle in Figure ) is covered by . Let be the crossing point between and , be the crossing point between and , be the crossing point between and , and be the crossing point between and .Since the slope of the line passing through and is less than 1 by Proposition 5.4, it suffices to prove the claim by showing that where denote the s-coordinates of , , and , respectively. Figure is a visualization of this claim.
Point is the solution of Then, Point is the solution of Then, Since is the solution of we get Point is the solution of Thus Lemma 5.12 implies and . Hence, the red shaded triangle in Figure is covered by which is a stable sub-triangle. Therefore, the entire horizontal gap between and is covered by stable sub-triangles.
Next, we consider the oblique gap between and . There are four steps to prove how the oblique gap is covered by stable sub-triangles.
Step 1: We will show that the intersection of the vertical and oblique gaps and the intersection of the horizontal and oblique gaps are covered by and . Let be the lowest corner of the former intersection and be the highest corner of the latter intersection. The two red shaded areas in Figure are a visualization of the intersections. We note that the slope of the line segment from to is greater than 1. To complete this step, we need to show that and . Point is the solution of and Then, Point is the solution of and Then,
Let be the crossing point of and the line passing through and and let be the crossing point of and the line passing through and . To show and , we need to show that Figure is a visualization what we need to show. By the definition of , and Propositions 5.2 and 5.1, we get the s-coordinates of and as follows: and Since we get . Since we obtain This implies .
For Steps 2, 3 and 4 below, we define the following:
denotes the region bounded by , , , and ,
denotes the solution of and ,
denotes the solution of and ,
Step 2: Let . The green regions shown in Figure are a visualization of , , , . In this step, we claim the following: (59) (59) and (60) (60)
We first prove (Equation59(59) (59) ). Let . Let be the solution of and and let be the solution of and . We claim that the points and are in . Figure is a visualization of this claim. We will prove this by comparing the s-coordinates of the points and . Point is the solution of and Then, The s-coordinate of is as follows: By the formulas for and , we get for . Point is the solution of and Then, We get the s-coordinate of as follows: It is elementary to check that for . Then, (Equation59(59) (59) ) holds.
Next, we will prove (Equation60(60) (60) ). Let . Let be the solution of and and let be the solution of and .
The s-coordinates of the points are as follows: Figure is a visualization of for . For , we get and . Hence, we get (Equation60(60) (60) ).
Step 3: Let . In this step, we will show that is covered by for . This step will be proved in Lemma 5.11 below.
Step 4: Let and . In this step, we the proof will depend on the value of c. There are two cases to be considered; and .
Case I: . We claim that the points are in . Let be the solution of and and let be the solution of and . Figure is a visualization of . The s-coordinates of are the following: (61) (61) (62) (62) (63) (63) (64) (64) By Lemma 5.13 below, we get and . Then, we obtain that Case II: . We define the following:
denotes the region bounded by , , , and ,
denotes the solution of and ,
denotes the solution of and ,
Point is the solution of and Then, (65) (65) The s-coordinate of is as follows: Point is the solution of and Then, (66) (66) The s-coordinate of is as follows: By Lemma 5.14 below, we obtain and . Then, By Steps 1-4, the entire oblique gap between and is covered by (67) (67) By Lemma 5.9, it follows that the set in (Equation67(67) (67) ) is covered by stable sub-triangles. Therefore, the entire oblique gap between and is covered stable sub-triangles.
We next state and prove the Lemmas 5.11, 5.12, 5.13, and 5.14 that were used above in the proof of Lemma 5.10.
Lemma 5.11
Let f be a negative linear feedback function, where . Let k and σ be positive numbers, , . Then, (the blue shaded regions in Figure ) defined at the end of Step 1 in the previous lemma is covered by .
Proof.
By (Equation61(61) (61) )–(Equation64(64) (64) ), the s-coordinates of , , , and are follows: The cases , can be checked individually [Citation28].
For each case, it follows that and for any .
Lemma 5.12
Let k and σ be positive integers such that . Then, the following inequalities hold: (68) (68) (69) (69) for .
Proof.
Let . The expression A can be rewritten as a quadratic polynomial in variable c for fixed k and σ: The polynomial has the following properties:
the coefficient of is negative,
its values at c = 0 and c = 1 are both negative,
the slopes at c = 0 and c = 1 are both positive.
Next, we claim that (70) (70) Let For fixed k and σ, B can be rewritten as a quadratic polynomial in variable c: The polynomial has the following properties:
the coefficient of is positive,
its values at c = 0 and c = 1 are both negative,
the slopes at c = 0 and c = 1 are both positive.
Lemma 5.13
Let k and σ be positive integers such that and . For , the following inequalities hold: (71) (71) (72) (72)
Proof.
Let g, h, i be functions on such that Note that and By using the conditions of k and c, it is obvious that are negative and are positive. Since and are positive, on . Since and are negative, on . Showing on is equivalent to showing (Equation71(71) (71) ).
Next, let . Then Since , we get (Equation72(72) (72) ).
Lemma 5.14
Let k and σ be positive integers such that and . For , the following inequalities hold: (73) (73) (74) (74)
Proof.
Let , then Since , inequality (Equation73(73) (73) ) holds. Let . Then Since , it implies that inequality (Equation74(74) (74) ) holds.
Let a point . Then for some k. By Lemma 5.10, it follows that the point is covered by a stable sub-triangle. We have now proved Theorem B.
6. Conclusion and discussion
In Theorem thmA, we have fully characterized the stability k-cyclic solutions for in all boundary sub-triangles for any negative feedback. For the order of events sr1 they are always neutrally stable. For the order rs1, the stability is completely determined by the index or . Solutions are asymptotically stable if i and k are relatively prime and neutral otherwise.
We have shown in Theorem thmB that for linear negative feedback the stable boundary triangles completely cover the parameter triangle .
Thus the model predicts that there will always exist an asymptotically stable clustered solution regardless of parameter values. Numerics show that this is also true for many forms of nonlinear feedback. See Figures and . In [Citation39], it was shown that for any negative feedback the synchronized solution is unstable. In [Citation2], it was shown that the ‘uniform solution’, i.e. a steady-state periodic solution with cells spread out maximally around the circle is also unstable in most cases. Thus it appears that for negative feedback systems of this form and any parameter values, a k cluster solution will be the only stable periodic solution. This is what we always observe in simulations starting from random initial conditions -- a k cluster periodic solution emerges with roughly the same number of cells in each cluster (see [Citation5] and [Citation32]). The universality of this result is important because for these models, as with many biological systems, the parameter values are hard to estimate from first principles.
In the following figures, we show visualizations for overlays of stable sub-triangles. The figures were generated using a MATLAB program by the following process:
We first consider linear negative feedback functions and then some examples of nonlinear negative feedback functions.
For each k where , the program constructs stable sub-triangles (blue shaded sub-triangles) by using the vertex formula (Equation34(34) (34) ) and Theorems 3.1 and 3.3. Note that these two results provide all stable sub-triangles among the boundary sub-triangles.
Then, the program displays in one plot all the constructed stable boundary sub-triangles.
For negative linear feedback functions and , Figures and are overlays of stable regions for and .
In Figures and , we show overlays of stable regions for two nonlinear feedback functions and . For both of these examples and many others that we examined, the parameter triangle is fully covered by stable sub-triangles. Thus we believe that the conclusion of Theorem thmB holds far beyond the linear case.
We note from Figures and and those in this section that most of the area of is already covered with stable sub-triangles with small k. While larger k are theoretically possible, they are expected to be of little consequence for three reasons: (1) the parameter sets where they exist grow small as k increases (they are on the boundary of ), (2) these sets are often overlapped by stability regions with fewer clusters and (3) the amount of feedback exerted by a single cluster would decrease like 1/k as k increases and at some point would be insufficient to overcome the noise in the system. The number of cells, n, in a bioreactor with a litre of fluid is on the order of , so for practical purposes .
We observe that there are some negative nonlinear feedback functions such that some points in are not covered by any stable boundary sub-triangle. By Theorems 3.1 and 3.3 and the vertex formula of sub-triangles (Equation34(34) (34) ), if there exist a positive integer and a subset G of ( is defined in Definition 5.6) such that G is not covered by stable boundary sub-triangles for , then G is not covered by any stable boundary sub-triangle. For , Figure suggests that there are regions in that are not covered by any stable boundary sub-triangles. This feedback function has the features that it is not Lipschitz and it is not bounded below by the functions covered in Theorem thmB. We also observe in Figure that for a particular negative feedback function that is Lipschitz and bounded below by the function , the union of stable boundary sub-triangles for all does not cover the interior of .
Whether Theorem thmB can be extended more generally is an open question. The numerical results shown in Figures and make it clear that for some non-linear negative feedback functions the stable boundary sub-triangles alone do not fully cover the parameter triangle. As discussed in [Citation2], there are a few exceptional interior sub-triangles that are stable. It is possible that these stable interior sub-triangles cover any holes. In [Citation29,Citation30], the stability of exceptional triangles was proved for k = 9 and . Further, they showed that for k prime, some interior sub-triangles can become stable for larger feedback. The indices of these sub-triangles satisfy certain number theoretic relations. Since the holes in the figures appear only for larger feedback, it is possible that these exceptional sub-triangles cover some or all of the holes.
Numerical simulations, i.e. running the model for some in the holes that appear show that even in the holes in the figures, the solutions always converge to some clustered solution.
In light of these considerations, settling the conjecture fully appears to be complicated.
Disclosure statement
No potential conflict of interest was reported by the author(s).
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Appendix. List of symbols
= | coordinate of a cell | |
= | coordinate of a cluster | |
= | initial condition of a cluster, i.e. | |
k | = | number of clusters in the cell cycle |
S | = | interval on the cycle for a real number |
R | = | interval on the cycle for a real number |
σ | = | number of clusters inside S at the initial time |
ρ | = | number of clusters in (outside R) at the initial time |
= | feedback function | |
= | a particular value of the feedback function when σ clusters are in the S region, from the total number of k clusters | |
= | ||
= | ||
Π | = | Poincaré return map for the system with clusters |
F | = | partial return map, a factor of Π |
= | parameter triangle, set of points such that 0<s<r<1 | |
= | sub-triangle (isosequential region) corresponding to the k-cyclic solutions with order of events and initial conditions where σ clusters lie in S and ρ clusters are outside R | |
= | sub-triangle corresponding to the k-cyclic solutions with order of events and initial conditions where σ clusters lie in S and ρ clusters are outside R | |
= | triangle bounded by , , and if a real number (Section 3.2). If c = 0 (zero feedback in Section 3.1), it represents a triangle bounded by , , and . s |