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Research Paper

Fourier transform infrared microspectroscopy for the analysis of the biochemical composition of C. elegans worms

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Article: e1132978 | Received 08 Sep 2015, Accepted 14 Dec 2015, Published online: 18 Feb 2016
 

ABSTRACT

Changes in intermediary metabolism have profound effects on many aspects of C. elegans biology including growth, development and behavior. However, many traditional biochemical techniques for analyzing chemical composition require relatively large amounts of starting material precluding the analysis of mutants that cannot be grown in large amounts as homozygotes. Here we describe a technique for detecting changes in the chemical compositions of C. elegans worms by Fourier transform infrared microspectroscopy. We demonstrate that the technique can be used to detect changes in the relative levels of carbohydrates, proteins and lipids in one and the same worm. We suggest that Fourier transform infrared microspectroscopy represents a useful addition to the arsenal of techniques for metabolic studies of C. elegans worms.

Abbreviations

FT-IR=

Fourier transform infrared

CARS=

coherent anti-Stokes Raman scattering

SRS=

stimulated Raman scattering

NMR=

nuclear magnetic resonance

MALDI-TOF=

matrix assisted laser desorption ionization-time-of-flight

L4=

Fourth larval stage

FPA=

focal plane array

MCR-ALS=

multivariate curve resolution – alternating least squares

ATR=

attenuated total reflectance.

Disclosure of potential conflicts of interest

No potential conflicts of interest were disclosed.

Acknowledgments

We thank Lars Nilsson, Gautam Kao and Ola Billing for discussions.

Funding

Some strains were provided by the CGC, which is funded by NIH Office of Research Infrastructure Programs (P40 OD010440). The research was supported by project grants from The Swedish Cancer Society (12 0534) and The Swedish Research Council (K2012-67X-20441-063).

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