The complete chloroplast genome of Allium ferganicum

Abstract

The complete chloroplast (cp) genome of Allium ferganicum was sequenced and annotated. The whole chloroplast genome consists of 153,126 bp with a typical quadripartite structure separated by a pair of 26,556 bp inverted repeat (IR) regions. The structure also includes the large single copy (LSC) − 81,982 bp and the small single copy (SSC) − 18,033 bp. The A. ferganicum chloroplast genome encodes 114 unique genes including 80 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The phylogenetic trees for 35 plastomes genomes showed that A. ferganicum is closely related to A. sativum (garlic) and A. ampeloprasum (leek).

Keywords:

• Allium
• chloroplast genome
• phylogenetic analysis

Disclosure statement

No potential conflict of interest was reported by the author(s).

Data availability statement

The data that support the findings of this study are available in [GenBank] at [https://www.ncbi.nlm.nih.gov/genbank], reference number [MT588185].

Additional information

Funding

This study was supported by the Fund for Reserve Talents of Young and Middle-aged Academic and Technical Leaders of Yunnan Province [Grant 2014HB027], the Scientific Research Fund Project of Education Department of Yunnan Province [2019J0143] the CAS “Light of West China” Program, the National Natural Science Foundation of China [Grant 31360456, 31060252], and the Fund for Science and Technology Plan of Puer City [Science and technology bureau Puer city, No. 2014-38].