1,006
Views
2
CrossRef citations to date
0
Altmetric
Mitogenome Announcement

Molecular identification and phylogenetic analysis of a Callosciurus notatus complete mitogenome from Peninsular Malaysia

ORCID Icon, , ORCID Icon, , , , ORCID Icon & show all
Pages 3004-3006 | Received 04 Jul 2020, Accepted 12 Jul 2020, Published online: 26 Aug 2020
 

Abstract

The mitogenome of a plantain squirrel, Callosciurus notatus, collected from Bukit Tarek Forest Reserve (Extension), Selangor, Malaysia was sequenced using BGISEQ-500RS technology. The 16,582 bp mitogenome consists of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and 1 control region. A phylogenetic and BLASTn analysis against other available datasets showed that the mitogenome matched with 99.49% similarity to a previously published C. notatus mitogenome from Peninsular Malaysia. However, it also diverged by nearly 8% (92.24% match) from a second previously published mitogenome for the same species, sampled in East Kalimantan, Indonesia. This suggests a difference in landscape features between both localities might affect its genetic connectivity.

Acknowledgements

This study was supported by the Ministry of Education, Malaysia under the Fundamental Research Grant Scheme (R.J130000.7845.4F963), Universiti Teknologi Malaysia (UTM) Research University Grant Tier 1 (Q.J130000.2545.18H49) and UTM Transdisciplinary Research Grant (Q.J130000.3554.05G69/Q.J130000.3514.06G58).

Disclosure statement

No potential conflict of interest was reported by the author(s).

Data availability statement

The data that support the findings of this study are openly available in National Center for Biotechnology Information (NCBI) at https://www.ncbi.nlm.nih.gov, accession number MT231329.