The complete chloroplast genome of Amana baohuaensis (Liliaceae)

Abstract

Amana baohuaensis is a new species that was just named in 2019. Here, we obtained the complete chloroplast (cp) genome of A. baohuaensis using the Illumina paired-end sequencing technology. The cp genome has a typical quadripartite structure with 150,757 bp in length, containing a large single-copy (LSC) region of 81,757 bp, a small single-copy (SSC) region of 16,962 bp, and two inverted repeat (IR) regions of 26,019 bp. The total GC content is 36.73%, of which, the GC content of LSC, SSC and IR regions are 34.63%, 30.11% and 42.20%, respectively. The cp genome of A. baohuaensis contains 111 unique genes, including 78 protein-coding genes, 29 tRNA genes, and four rRNA genes. The Maximum Parsimony (MP) phylogenetic analysis suggested that A. baohuaensis had the closest relationship with A. wanzhensis, and all Amana species grouped together with high bootstrap support.

Keywords:

• Amana baohuaensis
• chloroplast genome
• Liliaceae
• phylogenetic analysis

Disclosure statement

No potential conflict of interest was reported by the author(s).

Data availability statement

The data that support the findings of this study are openly available in GenBank of NCBI at https://www.ncbi.nlm.nih.gov, reference number MT898423.

Additional information

Funding

This work was supported by the “Double First-Class” University. Project [CPU2018GY11], Special project of "National Chinese Materia Medica (CMM) Resources Survey" [[2017]66], Key Project at Central Government Level: The Ability Establishment of Sustainable Use for Valuable Chinese Medicine Resources [2060302], National Key Research and Development Program of China [2017YFC1700701], Major Program of Increase or Decrease in the Central Government [2060302] and China Agriculture Research System [CARS-21].