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Plastome Reports

First record of the complete chloroplast genome of Polygonatum infundiflorum (Asparagaceae), a Korean endemic species

ORCID Icon, ORCID Icon, ORCID Icon & ORCID Icon
Pages 603-606 | Received 13 Feb 2023, Accepted 07 May 2023, Published online: 25 May 2023
 

Abstract

Polygonatum infundiflorum Y.S. Kim, B.U. Oh & C.G. Jang et al. Citation1998 is a Korean endemic species. This is first report on the complete chloroplast genome sequence of P. infundiflorum. The complete chloroplast genome length was 154,578 bp with a GC content of 37.7%. The large single-copy (LSC) region was 83,527 bp long, and the small single-copy (SSC) region was 18,457 bp long. The paired inverted repeats (IRs) were 26,297 bp and separated the LCS and SSC regions. There were 113 genes, comprising 78 protein-coding genes, four rRNA genes, 30 tRNA genes, and one pseudogene (infA). In total, 16 genes contained one intron, and two genes contained two introns. Phylogenetic analysis suggested that Polygonatum was divided into three sections, each forming a monophyletic group. P. infundiflorum was sister to P. macropodum and formed a monophyletic group with P. inflatum. This study provides basic information for future research and contributes to taxonomic and genetic studies on Polygonatum.

Acknowledgments

We thank Sa-Bum Jang and Eun-Ho Lee for their assistance in sampling and laboratory work throughout the study.

Ethical approval

This study complied with relevant institutional, national, and international guidelines and legislation. This species is not an endangered or protected species, and the collection area is not protected.

Author contributions

Se Ryeong Lee analyzed the data and drafted the manuscript. Sang-Chul Kim collected and analyzed the data. Young-Ho Ha collected the data and conceived the original structure of the review along with Dong Chan Son. All the authors have read and agreed to the submitted version of the manuscript.

Disclosure statement

No potential conflict of interest was reported by the author(s).

Data availability statement

The genome data that support the findings of this study are available at NCBI (https://www.ncbi.nlm.nih.gov/) under the accession number OP764686. The associated BioProject, SRA, and Bio-Sample numbers are PRJNA897089, SRR22184768, and SAMN31577749, respectively.

Additional information

Funding

This research was funded by grants from Scientific Research (KNA1-1-13, 14-1) of the Korea National Arboretum, Republic of Korea.