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Mitochondrial DNA Part A
DNA Mapping, Sequencing, and Analysis
Volume 29, 2018 - Issue 6
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Research Article

Characterization of threatened endemic fish Osteobrama belangeri (Valenciennes, 1844) and related species from North-East India based on morphological and molecular analysis

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Pages 919-932 | Received 20 Jun 2017, Accepted 05 Oct 2017, Published online: 02 Nov 2017
 

Abstract

Four species of the genus Osteobrama collected from five different sampling sites of Chindwin and Barak river basin of North-East India, namely O. belangeri, O. cotio, O. cunma and O. feae, were characterized. Meristic study showed differences in anal fin rays count and lateral line scales. Morphometric analysis revealed significant differences among Osteobrama species. In Truss analysis, a clear pattern of differentiation was observed among the four species with discriminant function analysis assigning 100% correctly to the particular species. In molecular analysis, four Osteobrama species collected were barcoded with COI and 16S rRNA sequences and phylogenetically these four species formed two distinct clusters, O. belangeri form one separate cluster, from the other three species i.e. O. cotio, O. cunma and O. feae. High-resolution clusters generated (NJ trees) aided the groupings of species corresponding to their genera and families which are in confirmation to the values generated by COI Automatic Barcode Gap Discovery bioinformatics platform.

Acknowledgements

The authors are grateful to the Director, NBFGR, Lucknow, for providing necessary facilities. Excellent technical support from Sh. Rajesh Kumar is also duly acknowledged. Thanks are due to the anonymous referee and Editor-in-Chief for their comments and constructive suggestion.

Disclosure statement

The authors report no conflicts of interest. The authors alone are responsible for the content and writing of the paper.

Supporting information

The source code for ABGD. Downloaded from http://wwwabi.snv.jussieu.fr/public/abgd/ on December 2015.

Additional information

Funding

First author is thankful to the Department of Biotechnology, Government of India, New Delhi for financial support, in the form of fellowship, to carry out this work.

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