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Abstract
A novel approach to auto‐purification of a wide variety of organic compounds is described. It is based on normal‐phase (NP) gradient high performance liquid chromatography (HPLC), performed on a 2 × 15 cm cyano column hyphenated with atmospheric pressure chemical ionization (APCI) source, and a single quad mass spectrometer (MS). A commercially available preparative HPLC–MS system, equipped with mass‐directed fraction collection capabilities, has been successfully used for NP purification of neutral, acidic, and basic pharmacologically active compounds. Samples of 10–100 mg were chromatographed in gradients of methanol in hydrophobic organic solvents, and collected using generic chromatographic, detection and fraction collection experimental parameters. “Smart” collection—one component–one collection vessel—with 90–95% recovery, was achieved by controlling injection volume and gradient slope and by adding acetic acid and diethylamine to the mobile phase to keep peak elution volumes below 50 mL. Auto‐collection of a solute was based on the main ion in its APCI–MS spectrum. The technique described has been also successfully used for chiral preparative HPLC applications and purification of non‐UV‐active compounds.