Disseminated Coinfection by Mycobacterium fortuitum and Talaromyces marneffei in a Non-HIV Case

Abstract

Background

Mycobacterium fortuitum is a rapidly growing non-tuberculous mycobacterium (NTM) with weak pathogenicity. Here, we present a rare case of disseminated M. fortuitum and Talaromyces marneffei coinfection in a human immunodeficiency virus (HIV) negative patient.

Case Presentation

A 28-year-old female was admitted to our hospital due to 2 months of swelling of lymph nodes on the right side of her cervix, accompanied by repeated low fever for more than 1 month. Biopsy of the right cervical lymph node and endobronchial ultrasound-guided transbronchial fine needle aspiration (EBUS-TBNA) both suggested granulomatous inflammation. The bacterial culture and mycobacteria examination of the lesion as well as HIV antibody test were all negative. Disseminated T. marneffei infection was diagnosed by the quantitative polymerase chain reaction (qPCR) results from the blood showing 1798 copies/ul. In the meantime, treatment with amphotericin B combined with cefoxitin was administered for suspected NTM infection. However, the once-dropped fever recurred and the lymph nodes continued to swell. Metagenomics next-generation sequencing (mNGS) detection of the lymph nodes indicated M. fortuitum. After combination treatment with amphotericin B, voriconazole, linazolamide, and imipenem, the patient’s body temperature returned to normal, the lymph node swelling was gradually reduced, and the lung lesion was absorbed.

Conclusion

We report the first case of an HIV-negative patient diagnosed with disseminated M. fortuitum and T. marneffei coinfection with nonspecific clinical manifestation, in order to heighten awareness of these infections.

Keywords:

• Mycobacterium fortuitum
• Talaromyces marneffei
• coinfection
• non-HIV

Introduction

Mycobacterium fortuitum is widely distributed in natural environments with strong survivability¹ and can cause cutaneous and pulmonary infection, lymphadenitis, and disseminated disease. M. fortuitum pulmonary disease is associated with multiple conditions, such as gastroesophageal disease² and structural pulmonary disorders, while disseminated disease is usually associated with immunodeficiency disorders.³ Pathogenesis of NTM remains unclear and potential pathogenicity factors include hydrophobic outer membrane rich in lipids, surface adhesive ability, biofilm and aerosol formation.⁴ Macrophages are critical in the host’s immune response to NTM. Specifically, the pathogen-recognition receptors of macrophages recognize pathogen-associated molecular patterns on the NTM. The macrophage then phagocytoses the NTM to form a phagosome, which fuses with the lysosome to form a phagolysosome to eliminate NTM. Macrophages act as antigen-presenting cells to trigger downstream activation of cellular and humoral adaptive immune responses. Macrophages can also kill NTM by producing antimicrobial active substances such as reactive oxygen species and reactive nitrogen species or by autophagy/necrosis mechanisms. NTM can evade the attack of the immune system by impairing phagosome maturation and autophagy/necrosis and promoting chronic infection.⁵ There is some evidence that NTM uses apoptotic macrophages to facilitate the spreading and survival in the host.⁶ Besides, in response to stimuli from NTM pathogens, the macrophage lineage expresses polarized functional properties, namely activated macrophages (M1) and activated macrophages (M2), with M2 polarization regulating immunity and preventing NTM injury during the advanced stages of infection, which is a critical mechanism of intracellular infection.^7,8 Moreover, granuloma is also a sanctuary for NTM. In a zebrafish model, M. fortuitum can invade macrophages to develop mycobacterial granuloma, leading to chronic infection.⁹

As an intracellular pathogen, T. marneffei also inhibits phagosome maturation.¹⁰ T. marneffei can also withstand host-cell defenses such as antioxidants, heat shock proteins, and well-conserved mitogen-activated protein kinases signaling cascades.¹¹ T. marneffei is capable of driving macrophage polarization,¹² but it remains unclear if T. marneffei can induce macrophages to M2 polarization in order to survive in the host during infection.

Clinically, M.f ortuitum usually causes colonized or transient infection in respiratory tracts.^13,14 Coinfection by M. fortuitum and another intracellular pathogen has been reported in patients with immunodeficiency such as acquired immune deficiency syndrome but not in healthy individuals.^15,16 Coinfections of T. marneffei with other NTM have also been reported,^17–21 but not with M. fortuitum. M. fortuitum and T. marneffei are opportunistic pathogens, with the majority of cases of disseminated infection found in patients with immunodeficiency diseases.^22–24 In our case, a non-HIV patient had coinfection with two pathogens, and we attempted to rule out potential primary immunodeficiency.

Here, we report the first case of disseminated M. fortuitum and T. marneffei coinfection in an HIV-negative patient with no specific clinical symptoms and a difficult early diagnosis, to provide clinical experience.

Case Presentation

A 28-year-old female was admitted to our hospital on August 17, 2017, with lymphadenomegaly on her right cervical area for approximately 2 months and repeated fever for more than 1 month, accompanied by a red rash, edema, and painful subcutaneous nodules in bilateral legs. Physical examination revealed lymphadenopathy in the right cervical bone and painful erythema nodosum in the bilateral calf. The patient had a history of pet rat bites in 2015.

Laboratory tests showed that hemoglobin (9.4 g/dL) and hematocrit (28.8%) levels were decreased, while white blood cell count (16.27×109/L), neutrophils (78.6%), platelet count (418×109/L), blood C-reactive protein (138.15 mg/L) and erythrocyte sedimentation rate (88 mm/h) were elevated. HIV serology and serum cryptococcal capsular antigen tests were negative. Immunoglobulin levels and lymphocyte subsets were normal. T cell spot test (T-SPOT) was indeterminate. Culture of blood, sputum, bronchoalveolar lavage fluid (BALF), and skin lesions were all negative. Chest computed tomography (CT) displayed patchy infiltrates in the right upper lung with enlargement of hilus pulmonis and mediastinal lymph nodes (Figure 1A). Pathological examination of the cervical lymph nodes suggested granulomatous inflammation, but acid-fast staining and periodic acid-Schiff (PAS) staining were negative (Figure 2A and B). EBUS-TBNA biopsy examination showed scattered granulomatous inflammation. During the course, empirical treatments with cefoxitin (CFX), levofloxacin (LVFX), moxifloxacin (MFX), cefodizime (CDZ), clarithromycin (CLA), etimicin (ETM) and anti-tuberculosis isoniazid (H), rifampicin (R), pyrazinamide (Z), ethambutol (E) regimen were successively administered, but no improvement was observed. By the end of October 2017, the patient developed pain in the head, right shoulder, gingiva, and knee-joint. Cerebrospinal fluid examination was normal, its smear and culture were all negative. Although bone marrow biopsy was consistent with infection and there was no evidence of hematological malignancy, the culture of bone marrow and lymph node tissue was both negative. Pathology examination of cervical lymph nodes showed suppurative necrotizing lymphadenitis, no fungus, and PAS (-). Positron emission tomography-computed tomography displayed enlargement of multiple lymph nodes of the right hilar, mediastinum, right supraclavicular and right neck, splenomegaly and increased bone metabolism in multiple places. The symptoms persisted after multiple rounds of antibiotic treatments, raising the possibility of a fungal infection. As the patient had a history of rat bites, an important natural reservoir for T. marneffei, we conducted T. marneffei qPCR and obtained a result of 1798 copies/uL. Therefore, the patient was diagnosed with disseminated T. marneffei infection, and intravenous antifungal therapy with amphotericin B liposome (AMPB) commenced on November 6, 2017. Owing to suspicion of coinfection with NTM, the patient was also treated with cefoxitin beginning on November 10, 2017. Subsequently, her body temperature dropped to normal, and symptoms of cough and sputum improved. The patient returned to the local hospital and continued treatment with itraconazole and cefoxitin.

Figure 1 (A and B) shows lymph node enlargement in the hilus pulmonis zone; (B–E) shows that enlarged lymph nodes shrank gradually in the hilus pulmonis zone.

Figure 2 (A and B) pathological examination of H&E staining (H&E, 100×; H&E, 400×) from the cervical lymph nodes suggested granulomatous inflammation. Granulomas is composed of epithelioid cells in the lymph nodes. PAS(-).

However, the lymph nodes remained enlarged. In December 2018, the patient presented with hemoptysis and recurrent intermittent fever, cough, sputum, fever, and rash. The patient presented with recurrent fever, rash and lymph node enlargement, which did not improve despite treatment with various antibiotics and anti-infective treatment for T. marneffei and M. tuberculosis. The pathological manifestations were granulomatous inflammation, but we could not rule out NTM infection because the cultures for M. tuberculosis and NTM were negative. Therefore, we performed an mNGS test, which revealed M. fortuitum in the lymph nodes. Additionally, in January 2020, qPCR analysis of a BALF sample detected T. marneffei. The patient was diagnosed with coinfection with M. fortuitum and T. marneffei and was treated with a combination of amphotericin B, voriconazole (VRC), linezolid (LZD) and ETM. Her body temperature returned to normal and respiratory symptoms improved. On March 19, 2020, chest CT showed patchy infiltrates, banded and nodular shadows, as well as pleural effusion (Figure 3A). Emission computed tomography suggested abnormal concentration of imaging agent in various parts of the bone. One month later, the therapy was adjusted to a combination regimen of VRC, LZD, MFX and CLA, which have continued to date. During follow-up in May and August 2020, the patient had no fever, the symptoms of cough and sputum had improved, and the rash had subsided. Re-examination of chest CT indicated that the enlarged hilar lymph nodes had gradually shrank (Figure 1B–E), and the lung lesions were significantly absorbed (Figure 3A–C). The patient experienced significant pain for more than 2 years between onset to the definitive diagnosis. The hospitalization and drug administration process throughout the history is summarized in Figure 4. Unfortunately, we overlooked the possibility of immunodeficiency in HIV-negative patient coinfected with M. fortuitum and T. marneffei.

Figure 3 (A) Chest CT shows patchy infiltrates, banded and nodular shadows, pleural effusion. (A–C) Lesions in the lower lobe of the right lung and the pleural effusion absorbed gradually.

Figure 4 Treatment and manifestation timeline.

Abbreviations: CFX, cefoxitin; LVFX, levofloxacin; MFX, moxifloxacin; CDZ, cefodizime; CLA, clarithromycin; ETM, etimicin; H, isoniazid; R, rifampicin; Z, pyrazinamide; E, ethambutol; AMPB, amphotericin B liposomes; VRC, voriconazole; LZD, linezolid.

Discussion and Conclusions

The diagnosis of disseminated NTM infection was mainly based on positive blood culture, followed by positive culture of bone marrow, liver, and lymph node tissue.²⁵ In this case, we detected M. fortuitum in the lymph node samples, which is the best evidence of tissue infection, rather than colonization. Meanwhile, we made the diagnosis of disseminated T. marneffei by the detection of high copies of T. marneffei with qPCR.²⁶ The patient was finally diagnosed with disseminated M. fortuitum and T. marneffei infection.

We noticed that the patient had recurrent skin rashes throughout the disease. Either M. fortuitum infection or T. marneffei infection has cutaneous manifestation. Clinical signs of M. fortuitum infection are abscess, nodule, plaque, and papule. The most commonly involved sites are the legs.²⁷ This is similar to our case of painful erythema nodosum in the bilateral legs. While for T. marneffei infection, characteristic skin manifestations are umbilicated papules.²⁸ The skin lesions are mainly distributed on the face, scalp, upper extremities, and trunk. Immune deficiency and trauma history are risk factors for NTM skin infections.²⁹ In the case of M. fortuitum, patients with single skin lesions are almost always immunocompetent; however, multiple lesions are usually in the context of immunosuppression, and related to disseminated disease.³⁰ In our case, the patient had a history of trauma, but clinical morphology showed multiple lesions. Combined with coinfection of two opportunistic pathogens, M. fortuitum and T. marneffei, the patient was considered to have an immunodeficiency disease. We tried to find evidence of immunodeficiency but failed to do so. The young female was HIV-negative, without a history of corticosteroids or immunosuppressive medicine, and no underlying diseases such as structural pulmonary disease, myeloma, autoimmune diseases, hematological malignancies, solid tumors, or diabetes. Her lymphocyte and immunoglobulin levels were also normal. However, with the data provided, we cannot exclude that the patient has an underlying primary immunodeficiency.

There is no specific treatment for M. fortuitum infection. It was recently found that rapidly growing mycobacterium harbors mutations in the erythromycin methylase (erm) gene, resulting in macrolide resistance.³¹ Macrolides work by binding to the 50S ribosomal subunit and inhibiting peptide synthesis. The erm mutant can inhibit binding to ribosomes and reduce the antimicrobial activity of macrolides. Recent guidelines³² recommend treating M. abscess pulmonary infection according to the presence or absence of the erm mutation. For non-mutant strains, initial treatment should consist of three active drugs including macrolides. For mutant strains, initial treatment should consist of four active drugs including macrolides, which is useful due to its immunomodulatory properties. M. fortuitum as a rapidly growing mycobacterium can be treated with the regimen used for M. abscess. Recently, an in vitro sensitivity test in Shanghai³³ confirmed that M. fortuitum was resistant to macrolides, and the resistance rates to clarithromycin, azithromycin, cefoxitin, and moxifloxacin were 94%, 100%, 88%, and 59%, respectively, while it showed good sensitivity to linezolid and imipenem. In our case, the initial therapy of cefoxitin, moxifloxacin, clarithromycin, and levofloxacin was ineffective. The patient’s condition improved after administration of the combination of linezolid, moxifloxacin, clarithromycin and imipenem. However, patients with IFN-γ autoimmune disease may have recurrent infections. Combination with rituximab can reduce the risk of recurrence. The patient in this study has not experienced disease recurrence to date and is undergoing regular follow-ups.

In summary, M. fortuitum is usually considered to have low virulence and causes colonized or transient infection rather than pathopoiesis in the respiratory tract. We report the first case of coinfection with M. fortuitum and T. marneffei in an HIV-negative patient. This finding serves as a reminder to clinicians that M. fortuitum infection may occur in a seemingly healthy patient, and that patients with similar disseminated infections should be evaluated for primary immunodeficiency.

Abbreviations

NTM, non-tuberculous mycobacteriosis; HIV, human immunodeficiency virus; EBUS-TBNA, endobronchial ultrasound-transbronchial lung needle aspiration; qPCR, quantitative polymerase chain reaction; mNGS, metagenomics next-generation sequencing; T-SPOT, T cell spot test; BALF, bronchoalveolar lavage fluid; CT, computed tomography; PAS, periodic acid-Schiff; CFX, cefoxitin; LVFX, levofloxacin; MFX, moxifloxacin; CDZ, cefodizime; CLA, clarithromycin; ETM, etimicin; H, isoniazid; R, rifampicin; Z, pyrazinamide; E, ethambutol; AMPB, amphotericin B liposomes; VRC, voriconazole; LZD, linezolid; erm, erythromycin methylase.

Ethics Approval and Informed Consent

Written informed consent to have the case details and any accompanying images published has been provided by the patient. No ethical committee approval was required for this study as the data were analyzed in a retrospective manner.

Author Contributions

All authors made substantial contributions to the conception and design, acquisition of data, or analysis and interpretation of data; participated in drafting the article or revising it substantially, agreed to submit to the current journal, gave final approval of the version to be published; and agreed to take responsibility for all aspects of the work.

Acknowledgments

All authors thank the patient and her families for their support.

Disclosure

The authors report no conflicts of interest in this work.