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Brief Report

Genome-scale network analysis of imprinted human metabolic genes

Pages 43-46 | Received 17 Oct 2008, Accepted 10 Dec 2008, Published online: 01 Jan 2009
 

Abstract

System analysis of metabolic network reconstructions can be used to calculate functional states or phenotypes.  This provides tools to study the metabolic effects of genetic and epigenetic properties, such as dosage sensitivity.  We used the genome-scale reconstruction of human metabolism (Recon 1) to analyze the effect of nine known or predicted imprinted genes on metabolic phenotypes.  Simulations of maternal deletion of ATP10A indicated an anabolic metabolism consistent with the known clinical phenotypes of obesity.  The abnormal expression of the other genes affected fewer subsections of metabolism consistent with a lack of established clinical phenotypes.  We found that four of nine genes had metabolic effect as predicted by the Haig’s parental conflict theory.

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