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Radwa A. Hanafy, Vikram B. Lanjekar, Prashant K. Dhakephalkar, Tony M. Callaghan, Sumit S. Dagar, Gareth W. Griffith, Mostafa S. Elshahed & Noha H. Youssef. (2020) Seven new Neocallimastigomycota genera from wild, zoo-housed, and domesticated herbivores greatly expand the taxonomic diversity of the phylum. Mycologia 112:6, pages 1212-1239.
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Radwa A. Hanafy, Britny Johnson, Mostafa S. Elshahed & Noha H. Youssef. (2018) Anaeromyces contortus, sp. nov., a new anaerobic gut fungal species (Neocallimastigomycota) isolated from the feces of cow and goat. Mycologia 110:3, pages 502-512.
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Ali Sadek, Bernard Taminiau, Georges Daube, Panagiotis Sapountzis, Frédérique Chaucheyras-Durand, Mathieu Castex, Françoise Coucheney & Djamel Drider. (2023) Impact of Dietary Regime and Seasonality on Hindgut’s Mycobiota Diversity in Dairy Cows. Microorganisms 12:1, pages 84.
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Adrienne L. Jones, Jordan Clayborn, Elizabeth Pribil, Andrew P. Foote, Dagan Montogomery, Mostafa S. Elshahed & Noha H. Youssef. (2023) Temporal progression of anaerobic fungal communities in dairy calves from birth to maturity. Environmental Microbiology 25:11, pages 2088-2101.
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N. R. Bhagat, S. Kumar, R. Kumari & V. K. Bharti. (2023) A Review on Rumen Anaerobic Fungi: Current Understanding on Carbohydrate Fermentation and Roughages Digestion in Ruminants. Applied Biochemistry and Microbiology 59:3, pages 231-249.
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Carrie J. Pratt, Emily E. Chandler, Noha H. Youssef & Mostafa S. Elshahed. (2023) Testudinimyces gracilis gen. nov, sp. nov. and Astrotestudinimyces divisus gen. nov, sp. nov., two novel, deep-branching anaerobic gut fungal genera from tortoise faeces. International Journal of Systematic and Evolutionary Microbiology 73:5.
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Radwa A. Hanafy, Yan Wang, Jason E. Stajich, Carrie J. Pratt, Noha H. Youssef & Mostafa S. Elshahed. (2023) Phylogenomic analysis of the Neocallimastigomycota: proposal of Caecomycetaceae fam. nov., Piromycetaceae fam. nov., and emended description of the families Neocallimastigaceae and Anaeromycetaceae. International Journal of Systematic and Evolutionary Microbiology 73:2.
Crossref
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Georgia Wunderlich, Michelle Bull, Tom Ross, Michael Rose & Belinda Chapman. (2023) Understanding the microbial fibre degrading communities & processes in the equine gut. Animal Microbiome 5:1.
Crossref
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Ning Liu, Weishuai Yu, Xiuna Guo, Jinyin Chen, Donghui Xia, Jie Yu & Duochuan Li. (2022) Oxidative cleavage of cellulose in the horse gut. Microbial Cell Factories 21:1.
Crossref
Crossref
B. Król, M. Słupczyńska, M. Wilk, M. Asghar & P. Cwynar. (2022) Anaerobic rumen fungi and fungal direct-fed microbials
in ruminant feeding. Journal of Animal and Feed Sciences.
Crossref
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Akshay Joshi, Diana Young, Liren Huang, Lona Mosberger, Bernhard Munk, Julia Vinzelj, Veronika Flad, Alexander Sczyrba, Gareth W. Griffith, Sabine Marie Podmirseg, Rolf Warthmann, Michael Lebuhn & Heribert Insam. (2022) Effect of Growth Media on the Diversity of Neocallimastigomycetes from Non-Rumen Habitats. Microorganisms 10:10, pages 1972.
Crossref
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Mostafa S. Elshahed, Radwa A. Hanafy, Yanfen Cheng, Sumit S. Dagar, Joan E. Edwards, Veronika Flad, Kateřina Olša Fliegerová, Gareth W. Griffith, Sandra Kittelmann, Michael Lebuhn, Michelle A. O'Malley, Sabine Marie Podmirseg, Kevin V. Solomon, Julia Vinzelj, Diana Young & Noha H. Youssef. (2022) Characterization and rank assignment criteria for the anaerobic fungi (Neocallimastigomycota). International Journal of Systematic and Evolutionary Microbiology 72:7.
Crossref
Crossref
Radwa A. Hanafy, Sumit S. Dagar, Gareth W. Griffith, Carrie J. Pratt, Noha H. Youssef & Mostafa S. Elshahed. (2022) Taxonomy of the anaerobic gut fungi (Neocallimastigomycota): a review of classification criteria and description of current taxa. International Journal of Systematic and Evolutionary Microbiology 72:7.
Crossref
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Bronwyn Dowd, Declan McDonnell & Maria G. Tuohy. (2022) Current Progress in Optimising Sustainable Energy Recovery From Cattle Paunch Contents, a Slaughterhouse Waste Product. Frontiers in Sustainable Food Systems 6.
Crossref
Crossref
Jing Ma, Pei Zhong, Yuqi Li, Zhanying Sun, Xiaoni Sun, Min Aung, Lizhuang Hao, Yanfen Cheng & Weiyun Zhu. (2022) Hydrogenosome, Pairing Anaerobic Fungi and H2-Utilizing Microorganisms Based on Metabolic Ties to Facilitate Biomass Utilization. Journal of Fungi 8:4, pages 338.
Crossref
Crossref
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Crossref
Crossref
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Crossref
Crossref
Yaping Wang, Yuhang Fu, Yuanyuan He, Muhammad Fakhar-e-Alam Kulyar, Mudassar Iqbal, Kun Li & Jiaguo Liu. (2021) Longitudinal Characterization of the Gut Bacterial and Fungal Communities in Yaks. Journal of Fungi 7:7, pages 559.
Crossref
Crossref
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Crossref
Crossref
Radwa A. Hanafy, Noha H. Youssef & Mostafa S. Elshahed. (2021) Paucimyces polynucleatus gen. nov, sp. nov., a novel polycentric genus of anaerobic gut fungi from the faeces of a wild blackbuck antelope. International Journal of Systematic and Evolutionary Microbiology 71:6.
Crossref
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Crossref
Crossref
Live H Hagen, Charles G Brooke, Claire A Shaw, Angela D Norbeck, Hailan Piao, Magnus Ø Arntzen, Heather M Olson, Alex Copeland, Nancy Isern, Anil Shukla, Simon Roux, Vincent Lombard, Bernard Henrissat, Michelle A O’Malley, Igor V Grigoriev, Susannah G Tringe, Roderick I Mackie, Ljiljana Pasa-Tolic, Phillip B Pope & Matthias Hess. (2021) Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber. The ISME Journal 15:2, pages 421-434.
Crossref
Crossref
Yuqi Li, Zhenxiang Meng, Yao Xu, Qicheng Shi, Yuping Ma, Min Aung, Yanfen Cheng & Weiyun Zhu. (2021) Interactions between Anaerobic Fungi and Methanogens in the Rumen and Their Biotechnological Potential in Biogas Production from Lignocellulosic Materials. Microorganisms 9:1, pages 190.
Crossref
Crossref
Katerina O. Fliegerova, Sabine M. Podmirseg, Julia Vinzelj, Diego J. Grilli, Simona Kvasnová, Dagmar Schierová, Hana Sechovcová, Jakub Mrázek, Giuliana Siddi, Graciela N. Arenas & Giuseppe Moniello. (2021) The Effect of a High-Grain Diet on the Rumen Microbiome of Goats with a Special Focus on Anaerobic Fungi. Microorganisms 9:1, pages 157.
Crossref
Crossref
Ryan M.R. Gawryluk & Courtney W. Stairs. (2021) Diversity of electron transport chains in anaerobic protists. Biochimica et Biophysica Acta (BBA) - Bioenergetics 1862:1, pages 148334.
Crossref
Crossref
Marcus Stabel, Radwa A. Hanafy, Tabea Schweitzer, Meike Greif, Habibu Aliyu, Veronika Flad, Diana Young, Michael Lebuhn, Mostafa S. Elshahed, Katrin Ochsenreither & Noha H. Youssef. (2020) Aestipascuomyces dupliciliberans gen. nov, sp. nov., the First Cultured Representative of the Uncultured SK4 Clade from Aoudad Sheep and Alpaca. Microorganisms 8:11, pages 1734.
Crossref
Crossref
Matthias Hess, Shyam S. Paul, Anil K. Puniya, Mark van der Giezen, Claire Shaw, Joan E. Edwards & Kateřina Fliegerová. (2020) Anaerobic Fungi: Past, Present, and Future. Frontiers in Microbiology 11.
Crossref
Crossref
Gonzalo Martinez-Fernandez, Jinzhen Jiao, Jagadish Padmanabha, Stuart E. Denman & Christopher S. McSweeney. (2020) Seasonal and Nutrient Supplement Responses in Rumen Microbiota Structure and Metabolites of Tropical Rangeland Cattle. Microorganisms 8:10, pages 1550.
Crossref
Crossref
Elnaz Azad, Kelsey B. Fehr, Hooman Derakhshani, Robert Forster, Surya Acharya, Ehsan Khafipour, Emma McGeough & Tim A. McAllister. (2020) Interrelationships of Fiber-Associated Anaerobic Fungi and Bacterial Communities in the Rumen of Bloated Cattle Grazing Alfalfa. Microorganisms 8:10, pages 1543.
Crossref
Crossref
Radwa A. Hanafy, Britny Johnson, Noha H. Youssef & Mostafa S. Elshahed. (2020)
Assessing anaerobic gut fungal diversity in herbivores using
D1
/
D2
large ribosomal subunit sequencing and multi‐year isolation
. Environmental Microbiology 22:9, pages 3883-3908.
Crossref
Crossref
Zuzana Janíčková & Štefan Janeček. (2020) Fungal α-amylases from three GH13 subfamilies: their sequence-structural features and evolutionary relationships. International Journal of Biological Macromolecules 159, pages 763-772.
Crossref
Crossref
Yuping Ma, Yuanfei Li, Yuqi Li, Yanfen Cheng & Weiyun Zhu. (2020) The enrichment of anaerobic fungi and methanogens showed higher lignocellulose degrading and methane producing ability than that of bacteria and methanogens. World Journal of Microbiology and Biotechnology 36:9.
Crossref
Crossref
St. Elmo Wilken, Susanna Seppälä, Thomas S. Lankiewicz, Mohan Saxena, John K. Henske, Asaf A. Salamov, Igor V. Grigoriev & Michelle A. O’Malley. (2020) Genomic and proteomic biases inform metabolic engineering strategies for anaerobic fungi. Metabolic Engineering Communications 10, pages e00107.
Crossref
Crossref
Yawei Zhang, Fuyong Li, Yanhong Chen, Hao Wu, Qingxiang Meng & Le Luo Guan. (2020) Metatranscriptomic Profiling Reveals the Effect of Breed on Active Rumen Eukaryotic Composition in Beef Cattle With Varied Feed Efficiency. Frontiers in Microbiology 11.
Crossref
Crossref
Jongsoo Chang & Hyunjin Park. (2020) Nucleotide and protein researches on anaerobic fungi during four
decades. Journal of Animal Science and Technology 62:2, pages 121-140.
Crossref
Crossref
Julia Vinzelj, Akshay Joshi, Heribert Insam & Sabine Marie Podmirseg. (2020) Employing anaerobic fungi in biogas production: challenges & opportunities. Bioresource Technology 300, pages 122687.
Crossref
Crossref
Veronika Flad, Diana Young, Susanna Seppälä, Casey Hooker, Noha Youssef, Sabine M. Podmirseg, Magdalena Nagler, Matthew Reilly, Yuanfei Li, Kateřina Fliegerová, Yanfen Cheng, Gareth W. Griffith, Mostafa Elshahed, Kevin V. Solomon, Michelle A. O’Malley & Michael K. Theodorou. 2020. Genetics and Biotechnology. Genetics and Biotechnology
413
437
.
Mona Dehhaghi, Hamed Kazemi Shariat Panahi, Gholamreza Salehi Jouzani, Sivakumar Nallusamy, Vijai Kumar Gupta, Mortaza Aghbashlo & Meisam Tabatabaei. 2020. Fungi in Fuel Biotechnology. Fungi in Fuel Biotechnology
149
175
.
HOUFU WANG, PENGFEI LI, XUCHUAN LIU, CHUNYONG ZHANG, QIONGFEN LU, DONGMEI XI, RENHUI YANG, SHULING WANG, WENSHUN BAI, ZHEN YANG, RONGKANG ZHOU, XIAO CHENG & JING LENG. (2019)
The Composition of Fungal Communities in the Rumen of Gayals (
Bos frontalis
), Yaks (
Bos grunniens
), and Yunnan and Tibetan Yellow Cattle (
Bos taurs
)
. Polish Journal of Microbiology 68:4, pages 505-514.
Crossref
Crossref
Miguel A. Naranjo‐Ortiz & Toni Gabaldón. (2019) Fungal evolution: diversity, taxonomy and phylogeny of the Fungi. Biological Reviews 94:6, pages 2101-2137.
Crossref
Crossref
Xue-Wei Wang, Isabelle Benoit, Johannes Z. Groenewald, Jos Houbraken, Xin Dai, Mao Peng, Xu Yang, Da-Yong Han, Cheng Gao & Liang-Dong Guo. (2019) Community dynamics of Neocallimastigomycetes in the rumen of yak feeding on wheat straw revealed by different primer sets. Fungal Ecology 41, pages 34-44.
Crossref
Crossref
Yan Wang, Noha H. Youssef, Matthew Brian Couger, Radwa A. Hanafy, Mostafa S. Elshahed & Jason E. Stajich. (2019) Molecular Dating of the Emergence of Anaerobic Rumen Fungi and the Impact of Laterally Acquired Genes. mSystems 4:4.
Crossref
Crossref
Chelsea L. Murphy, Noha H. Youssef, Radwa A. Hanafy, M. B. Couger, Jason E. Stajich, Yan Wang, Kristina Baker, Sumit S. Dagar, Gareth W. Griffith, Ibrahim F. Farag, T. M. Callaghan & Mostafa S. Elshahed. (2019) Horizontal Gene Transfer as an Indispensable Driver for Evolution of Neocallimastigomycota into a Distinct Gut-Dwelling Fungal Lineage. Applied and Environmental Microbiology 85:15.
Crossref
Crossref
Yuanfei Li, Yuqi Li, Wei Jin, Thomas J. Sharpton, Roderick I. Mackie, Isaac Cann, Yanfen Cheng & Weiyun Zhu. (2019) Combined Genomic, Transcriptomic, Proteomic, and Physiological Characterization of the Growth of Pecoramyces sp. F1 in Monoculture and Co-culture With a Syntrophic Methanogen. Frontiers in Microbiology 10.
Crossref
Crossref
Birbal Singh, Gorakh Mal, Sanjeev K. Gautam & Manishi MukeshBirbal Singh, Gorakh Mal, Sanjeev K. Gautam & Manishi Mukesh. 2019. Advances in Animal Biotechnology. Advances in Animal Biotechnology
31
38
.
Alaa. E. Rabee, Robert J. Forster, Chijioke O. Elekwachi, Kkaled Z. Kewan, Ebrahim A. Sabra, Safinaze M. Shawket, Hoda A. Mahrous & Omaima A. Khamiss. (2018) Community structure and fibrolytic activities of anaerobic rumen fungi in dromedary camels. Journal of Basic Microbiology 59:1, pages 101-110.
Crossref
Crossref
Akshay Joshi, Vikram B. Lanjekar, Prashant K. Dhakephalkar, Tony M. Callaghan, Gareth W. Griffith & Sumit Singh Dagar. (2018) Liebetanzomyces polymorphus gen. et sp. nov., a new anaerobic fungus (Neocallimastigomycota) isolated from the rumen of a goat. MycoKeys 40, pages 89-110.
Crossref
Crossref
Yanfen Cheng, Qicheng Shi, Ruolin Sun, Dong Liang, Yuanfei Li, Yuqi Li, Wei Jin & Weiyun Zhu. (2018) The biotechnological potential of anaerobic fungi on fiber degradation and methane production. World Journal of Microbiology and Biotechnology 34:10.
Crossref
Crossref
Nalin N. Wijayawardene, Julia Pawłowska, Peter M. Letcher, Paul M. Kirk, Richard A. Humber, Arthur Schüßler, Marta Wrzosek, Anna Muszewska, Alicja Okrasińska, Łukasz Istel, Aleksandra Gęsiorska, Paul Mungai, Adebola Azeez Lateef, Kunhiraman C. Rajeshkumar, Rajshree V. Singh, Renate Radek, Grit Walther, Lysett Wagner, Christopher Walker, D. Siril A. Wijesundara, Moslem Papizadeh, Somayeh Dolatabadi, Belle D. Shenoy, Yuri S. Tokarev, Saisamorn Lumyong & Kevin D. Hyde. (2018) Notes for genera: basal clades of Fungi (including Aphelidiomycota, Basidiobolomycota, Blastocladiomycota, Calcarisporiellomycota, Caulochytriomycota, Chytridiomycota, Entomophthoromycota, Glomeromycota, Kickxellomycota, Monoblepharomycota, Mortierellomycota, Mucoromycota, Neocallimastigomycota, Olpidiomycota, Rozellomycota and Zoopagomycota). Fungal Diversity 92:1, pages 43-129.
Crossref
Crossref
Doreen Schulz, Moneeb A. Qablan, Ilona Profousova-Psenkova, Peter Vallo, Terence Fuh, David Modry, Alexander K. Piel, Fiona Stewart, Klara J. Petrzelkova & Kateřina Fliegerová. (2018) Anaerobic Fungi in Gorilla (Gorilla gorilla gorilla) Feces: an Adaptation to a High-Fiber Diet?. International Journal of Primatology 39:4, pages 567-580.
Crossref
Crossref
Robert J. Gruninger, Thi T. M. Nguyen, Ian D. Reid, Jay L. Yanke, Pan Wang, Denis W. Abbott, Adrian Tsang & Tim McAllister. (2018) Application of Transcriptomics to Compare the Carbohydrate Active Enzymes That Are Expressed by Diverse Genera of Anaerobic Fungi to Degrade Plant Cell Wall Carbohydrates. Frontiers in Microbiology 9.
Crossref
Crossref
Shyam Sundar Paul, Dengpan Bu, Jianchu Xu, Kevin D. Hyde & Zhongtang Yu. (2018) A phylogenetic census of global diversity of gut anaerobic fungi and a new taxonomic framework. Fungal Diversity 89:1, pages 253-266.
Crossref
Crossref
Elin Videvall. (2018) Plasmodium parasites of birds have the most AT-rich genes of eukaryotes. Microbial Genomics 4:2.
Crossref
Crossref
Shelby S. Calkins, Nicole C. Elledge, Katherine E. Mueller, Stephen M. Marek, MB Couger, Mostafa S. Elshahed & Noha H. Youssef. (2018)
Development of an RNA interference (RNAi) gene knockdown protocol in the anaerobic gut fungus
Pecoramyces ruminantium
strain C1A
. PeerJ 6, pages e4276.
Crossref
Crossref
John K. Henske, Sean P. Gilmore, Doriv Knop, Francis J. Cunningham, Jessica A. Sexton, Chuck R. Smallwood, Vaithiyalingam Shutthanandan, James E. Evans, Michael K. Theodorou & Michelle A. O’Malley. (2017) Transcriptomic characterization of Caecomyces churrovis: a novel, non-rhizoid-forming lignocellulolytic anaerobic fungus. Biotechnology for Biofuels 10:1.
Crossref
Crossref
Joan E. Edwards, Robert J. Forster, Tony M. Callaghan, Veronika Dollhofer, Sumit S. Dagar, Yanfen Cheng, Jongsoo Chang, Sandra Kittelmann, Katerina Fliegerova, Anil K. Puniya, John K. Henske, Sean P. Gilmore, Michelle A. O'Malley, Gareth W. Griffith & Hauke Smidt. (2017) PCR and Omics Based Techniques to Study the Diversity, Ecology and Biology of Anaerobic Fungi: Insights, Challenges and Opportunities. Frontiers in Microbiology 8.
Crossref
Crossref