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Geomicrobiology Journal Volume 31, 2014 - Issue 3: Biogeochemistry and Microbial Ecology of Cave Systems
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Original Articles

Comparison of Bacterial Diversity in Azorean and Hawai'ian Lava Cave Microbial Mats

Jennifer J. Marshall Hathaway Department of Biology, University of New Mexico, Albuquerque, New Mexico, USA
,
Matthew G. Garcia Department of Biology, University of New Mexico, Albuquerque, New Mexico, USA
,
Monica Moya Balasch Department of Biology, University of New Mexico, Albuquerque, New Mexico, USA
,
Michael N. Spilde Institute of Meteoritics, University of New Mexico, Albuquerque, New Mexico, USA
,
Fred D. Stone University of Hawai'i at Hilo, Hilo, Hawai'i and Bishop Museum, Honolulu, Hawai'i, USA
,
Maria De Lurdes N. E. Dapkevicius Food Technology Group, CITA-A, Universidade dos Açores, Departamento de Ciências Agrárias, Rua Capitão João d’Ávila, São Pedro, Angra do Heroísmo, Terceira, Portugal
,
Isabel R. Amorim Food Technology Group, CITA-A, Universidade dos Açores, Departamento de Ciências Agrárias, Rua Capitão João d’Ávila, São Pedro, Angra do Heroísmo, Terceira, Portugal; Azorean Biodiversity Group (GBA, CITA-A) and Portuguese Platform for Enhancing Ecological Research and Sustainability (PEERS), Universidade dos Açores, Departamento de Ciências Agrárias, Rua Capitão João d'Ávila, São Pedro, Angra do Heroísmo, Terceira, Portugal
,
Rosalina Gabriel Azorean Biodiversity Group (GBA, CITA-A) and Portuguese Platform for Enhancing Ecological Research and Sustainability (PEERS), Universidade dos Açores, Departamento de Ciências Agrárias, Rua Capitão João d'Ávila, São Pedro, Angra do Heroísmo, Terceira, Portugal
,
Paulo A. V. Borges Azorean Biodiversity Group (GBA, CITA-A) and Portuguese Platform for Enhancing Ecological Research and Sustainability (PEERS), Universidade dos Açores, Departamento de Ciências Agrárias, Rua Capitão João d'Ávila, São Pedro, Angra do Heroísmo, Terceira, Portugal
&
Diana E. Northup Department of Biology, University of New Mexico, Albuquerque, New Mexico, USA
 show all
Pages 205-220 | Received 01 Oct 2012, Accepted 01 Feb 2013, Published online: 30 Jan 2014

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Jennifer J. M. Hathaway, Paris S. Salazar-Hamm, Nicole A. Caimi, Donald O. Natvig, Debbie C. Buecher & Diana E. Northup. (2024) Comparison of Fungal and Bacterial Microbiomes of Bats and Their Cave Roosting Environments at El Malpais National Monument, New Mexico, USA. Geomicrobiology Journal 41:1, pages 82-97.
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Jennifer J. M. Hathaway, Duane P. Moser, Jennifer G. Blank & Diana E. Northup. (2021) A Comparison of Primers in 16S rRNA Gene Surveys of Bacteria and Archaea from Volcanic Caves. Geomicrobiology Journal 38:9, pages 741-754.
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Maira N. Luis-Vargas, Rafael A. López-Martínez, Alfredo R. Vilchis-Nestor, Raquel Daza & Rocio J. Alcántara-Hernández. (2019) Bacterial Insights into the Formation of Opaline Stromatolites from the Chimalacatepec Lava Tube System, Mexico. Geomicrobiology Journal 36:8, pages 694-704.
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Kimberly B. Teehera, Sean P. Jungbluth, Bogdan P. Onac, Tayro E. Acosta-Maeda, Eric Hellebrand, Anupam K. Misra, Andreas Pflitsch, Michael S. Rappé, Stephen M. Smith, Myriam Telus & Norbert Schorghofer. (2018) Cryogenic Minerals in Hawaiian Lava Tubes: A Geochemical and Microbiological Exploration. Geomicrobiology Journal 35:3, pages 227-241.
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Karolina Tomczyk-Żak & Urszula Zielenkiewicz. (2016) Microbial Diversity in Caves. Geomicrobiology Journal 33:1, pages 20-38.
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Rafał Ogórek, Mariusz Dyląg & Bartosz Kozak. (2016) Dark stains on rock surfaces in Driny Cave (Little Carpathian Mountains, Slovakia). Extremophiles 20:5, pages 641-652.
Crossref
Daniel S. Jones & Jennifer L. Macalady. 2016. Their World: A Diversity of Microbial Environments. Their World: A Diversity of Microbial Environments 203 224 .
Cristina Riquelme, Jennifer J. Marshall Hathaway, Maria de L. N. Enes Dapkevicius, Ana Z. Miller, Ara Kooser, Diana E. Northup, Valme Jurado, Octavio Fernandez, Cesareo Saiz-Jimenez & Naowarat Cheeptham. (2015) Actinobacterial Diversity in Volcanic Caves and Associated Geomicrobiological Interactions. Frontiers in Microbiology 6.
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