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Geomicrobiology Journal Volume 31, 2014 - Issue 3: Biogeochemistry and Microbial Ecology of Cave Systems
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Original Articles

Metagenomic Evidence for Sulfide Oxidation in Extremely Acidic Cave Biofilms

Daniel S. Jones Department of Geosciences, The Pennsylvania State University, University Park, Pennsylvania, USA
,
Irene Schaperdoth Department of Geosciences, The Pennsylvania State University, University Park, Pennsylvania, USA
&
Jennifer L. Macalady Department of Geosciences, The Pennsylvania State University, University Park, Pennsylvania, USA
Pages 194-204 | Received 01 Feb 2013, Accepted 01 Jul 2013, Published online: 30 Jan 2014

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Francesca Beolchini, Viviana Fonti, Sevda Özdemiroğlu, Ata Akcil & Antonio Dell’Anno. (2017) Sulphur-oxidising bacteria isolated from deep caves improve the removal of arsenic from contaminated harbour sediments. Chemistry and Ecology 33:2, pages 103-113.
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Articles from other publishers (25)

Jo De Waele, Ilenia M. D'Angeli, Philippe Audra, Lukas Plan & Arthur N. Palmer. (2024) Sulfuric acid caves of the world: A review. Earth-Science Reviews 250, pages 104693.
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Heidi S. Aronson, Christian E. Clark, Douglas E. LaRowe, Jan P. Amend, Lubos Polerecky & Jennifer L. Macalady. (2023) Sulfur disproportionating microbial communities in a dynamic, microoxic‐sulfidic karst system. Geobiology 21:6, pages 791-803.
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Mark Dopson, Carolina González-Rosales, David S. Holmes & Nadia Mykytczuk. (2023) Eurypsychrophilic acidophiles: From (meta)genomes to low-temperature biotechnologies. Frontiers in Microbiology 14.
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Daniel S. Jones, Irene Schaperdoth, Diana E. Northup, Rodolfo Gómez-Cruz & Jennifer L. Macalady. (2023) Convergent Community Assembly among Globally Separated Acidic Cave Biofilms. Applied and Environmental Microbiology 89:1.
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Maria Mirabela Pop, Tiziana Di Lorenzo & Sanda Iepure. (2023) Living on the edge – An overview of invertebrates from groundwater habitats prone to extreme environmental conditions. Frontiers in Ecology and Evolution 10.
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Rob J. M. van Spanning, Qingtian Guan, Chrats Melkonian, James Gallant, Lubos Polerecky, Jean-François Flot, Bernd W. Brandt, Martin Braster, Paul Iturbe Espinoza, Joost W. Aerts, Marion M. Meima-Franke, Sander R. Piersma, Catalin M. Bunduc, Roy Ummels, Arnab Pain, Emily J. Fleming, Nicole N. van der Wel, Vasile D. Gherman, Serban M. Sarbu, Paul L. E. Bodelier & Wilbert Bitter. (2022) Methanotrophy by a Mycobacterium species that dominates a cave microbial ecosystem. Nature Microbiology 7:12, pages 2089-2100.
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Hai-Zhen Zhu, Cheng-Ying Jiang & Shuang-Jiang Liu. (2022) Microbial roles in cave biogeochemical cycling. Frontiers in Microbiology 13.
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Devender Mudgil, Dhiraj Paul, Sushmitha Baskar, Ramanathan Baskar & Yogesh S. Shouche. (2022) Cultivable microbial diversity in speleothems using MALDI-TOF spectrometry and DNA sequencing from Krem Soitan, Krem Lawbah, Krem Mawpun, Khasi Hills, Meghalaya, India. Archives of Microbiology 204:8.
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Jia Ai, Jianeng Guo, Yancheng Li, Xiong Zhong, Yang Lv, Jiang Li & Aijiang Yang. (2021) The diversity of microbes and prediction of their functions in karst caves under the influence of human tourism activities—a case study of Zhijin Cave in Southwest China. Environmental Science and Pollution Research 29:17, pages 25858-25868.
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Xuan Li, Ian Johnson, Kara Mueller, Simeon Wilkie, Lucija Hanzic, Philip L. Bond, Liza O'Moore, Zhiguo Yuan & Guangming Jiang. (2022) Corrosion mitigation by nitrite spray on corroded concrete in a real sewer system. Science of The Total Environment 806, pages 151328.
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David Camacho, Rodolfo Frazao, Aurélien Fouillen, Antonio Nanci, B. Franz Lang, Simon C. Apte, Christian Baron & Lesley A. Warren. (2020) New Insights Into Acidithiobacillus thiooxidans Sulfur Metabolism Through Coupled Gene Expression, Solution Chemistry, Microscopy, and Spectroscopy Analyses. Frontiers in Microbiology 11.
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Yaoyao Shen, Jiaqi Chen, Weiliang Shen, Caifang Chen, Zhihua Lin & Chenghua Li. (2019) Molecular characterization of a novel sulfide:quinone oxidoreductase from the razor clam Sinonovacula constricta and its expression response to sulfide stress. Comparative Biochemistry and Physiology Part B: Biochemistry and Molecular Biology, pages 110367.
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Hai-Zhen Zhu, Zhi-Feng Zhang, Nan Zhou, Cheng-Ying Jiang, Bao-Jun Wang, Lei Cai & Shuang-Jiang Liu. (2019) Diversity, Distribution and Co-occurrence Patterns of Bacterial Communities in a Karst Cave System. Frontiers in Microbiology 10.
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Subhro Banerjee, D. K. Jha & S. R. Joshi. 2019. Microbial Diversity in Ecosystem Sustainability and Biotechnological Applications. Microbial Diversity in Ecosystem Sustainability and Biotechnological Applications 3 30 .
Muammar MansorKhadouja HarouakaMatthew S. GonzalesJennifer L. MacaladyMatthew S. Fantle. (2018) Transport-Induced Spatial Patterns of Sulfur Isotopes (δ 34 S) as Biosignatures . Astrobiology 18:1, pages 59-72.
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Xuan Li, Ulrike Kappler, Guangming Jiang & Philip L. Bond. (2017) The Ecology of Acidophilic Microorganisms in the Corroding Concrete Sewer Environment. Frontiers in Microbiology 8.
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Sandro Galdenzi & Daniel S. Jones. 2017. Hypogene Karst Regions and Caves of the World. Hypogene Karst Regions and Caves of the World 143 159 .
Sandro Galdenzi. 2017. Hypogene Karst Regions and Caves of the World. Hypogene Karst Regions and Caves of the World 169 182 .
Daniel S Jones, Irene Schaperdoth & Jennifer L Macalady. (2016) Biogeography of sulfur-oxidizing Acidithiobacillus populations in extremely acidic cave biofilms . The ISME Journal 10:12, pages 2879-2891.
Crossref
Jo De Waele, Philippe Audra, Giuliana Madonia, Marco Vattano, Lukas Plan, Ilenia M. D'Angeli, Jean-Yves Bigot & Jean-Claude Nobécourt. (2016) Sulfuric acid speleogenesis (SAS) close to the water table: Examples from southern France, Austria, and Sicily. Geomorphology 253, pages 452-467.
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Daniel S. Jones & Jennifer L. Macalady. 2016. Their World: A Diversity of Microbial Environments. Their World: A Diversity of Microbial Environments 203 224 .
Cristina Riquelme, Fran?ois Rigal, Jennifer J. M. Hathaway, Diana E. Northup, Michael N. Spilde, Paulo A. V. Borges, Rosalina Gabriel, Isabel R. Amorim & Maria de Lurdes N. E. Dapkevicius. (2015) Cave microbial community composition in oceanic islands: disentangling the effect of different colored mats in diversity patterns of Azorean lava caves. FEMS Microbiology Ecology 91:12, pages fiv141.
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Ieva Kieraite-Aleksandrova, Vilius Aleksandrovas & Nomeda Kuisiene. (2015) Down into the Earth: microbial diversity of the deepest cave of the world. Biologia 70:8, pages 989-1002.
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Peter K. Swart. (2015) The geochemistry of carbonate diagenesis: The past, present and future. Sedimentology 62:5, pages 1233-1304.
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Michael R. Jackson, Scott L. Melideo & Marilyn Schuman Jorns. 2015. Hydrogen Sulfide in Redox Biology, Part A. Hydrogen Sulfide in Redox Biology, Part A 255 270 .

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