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Original Articles

Metagenomic and Metatranscriptomic Analyses of Bacterial Communities Derived From a Calcifying Karst Water Creek Biofilm and Tufa

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Pages 316-331 | Received 01 Sep 2013, Accepted 01 Mar 2014, Published online: 03 Apr 2015

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Read on this site (6)

Shida Li, Kaixin Liu, Jie Du, Cong Chen, Ningfei Lei, Xiangjun Pei, Jin Tong, Weiyang Xiao & Hongguan Xie. (2023) Bacterial Communities Associated with Tufa Deposits and Characterization of Indigenous Calcifying Bacterial Isolates from Jiuzhaigou National Nature Reserve, Sichuan, China. Geomicrobiology Journal 40:8-10, pages 780-793.
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Manyi Sun, Guiping Ren, Yan Li, Anhuai Lu & Hongrui Ding. (2019) Extracellular Electron Transfer Between Birnessite and Electrochemically Active Bacteria Community from Red Soil in Hainan, China. Geomicrobiology Journal 36:2, pages 169-178.
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Guiping Ren, Yingchun Yan, Manyi Sun, Xiao Wang, Xiaolei Wu, Yan Li, Anhuai Lu & Hongrui Ding. (2018) Considerable Bacterial Community Structure Coupling with Extracellular Electron Transfer at Karst Area Stone in Yunnan, China. Geomicrobiology Journal 35:5, pages 424-431.
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Katarzyna A. Palinska, Raeid M. M. Abed, Janina C. Vogt, Gudrun Radtke & Stjepko Golubic. (2017) Microbial Endoliths on East Adriatic Limestone Coast: Morphological vs. Molecular Diversity. Geomicrobiology Journal 34:10, pages 903-915.
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Articles from other publishers (12)

Jacqueline Hollensteiner, Franziska Wemheuer, Dominik Schneider, Birgit Pfeiffer & Bernd Wemheuer. 2023. Metagenomics. Metagenomics 13 21 .
Madangchanok Imchen, VT Anju, Siddhardha Busi, Mahima S. Mohan, Pattnaik Subhaswaraj, Madhu Dyavaiah & Ranjith Kumavath. (2022) Metagenomic insights into taxonomic, functional diversity and inhibitors of microbial biofilms. Microbiological Research 265, pages 127207.
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Fumito Shiraishi, Yusaku Hanzawa, Jiro Asada, Leonardo Fadel Cury & Anelize Manuela Bahniuk. (2022) Microbial influences on tufa deposition in a tropical climate. Sedimentary Geology 427, pages 106045.
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Kexin Li, Jinming Hu, Ting Li, Feng Liu, Juan Tao, Jiang Liu, Zejin Zhang, Xia Luo, Linfeng Li, Yongcui Deng & Rongxiao Che. (2021) Microbial abundance and diversity investigations along rivers: Current knowledge and future directions. WIREs Water 8:5.
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Yuan Yao, Subramanya Rao & Olivier Habimana. (2021) Active Microbiome Structure and Functional Analyses of Freshwater Benthic Biofilm Samples Influenced by RNA Extraction Methods. Frontiers in Microbiology 12.
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Yadan Huang & Qiang Li. (2019) Karst biogeochemistry in China: past, present and future. Environmental Earth Sciences 78:15.
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Anamarija Kolda, Ines Petrić, Maja Mucko, Sanja Gottstein, Petar Žutinić, Gordana Goreta, Ivančica Ternjej, Josip Rubinić, Maja Radišić & Marija Gligora Udovič. (2019) How environment selects: Resilience and survival of microbial mat community within intermittent karst spring Krčić (Croatia). Ecohydrology 12:2, pages e2063.
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Ali Kishk & Mohamed El-Hadidi. (2018) AmpliconNet: Sequence Based Multi-layer Perceptron for Amplicon Read Classification Using Real-time Data Augmentation. AmpliconNet: Sequence Based Multi-layer Perceptron for Amplicon Read Classification Using Real-time Data Augmentation.
Andrea K. Borsodi, Dóra Anda, Judit Makk, Gergely Krett, Péter Dobosy, Gabriella Büki, Anita Erőss & Judit Mádl-Szőnyi. (2018) Biofilm forming bacteria and archaea in thermal karst springs of Gellért Hill discharge area (Hungary). Journal of Basic Microbiology 58:11, pages 928-937.
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Mia M. Bengtsson, Karoline Wagner, Clarissa Schwab, Tim Urich & Tom J. Battin. (2018) Light availability impacts structure and function of phototrophic stream biofilms across domains and trophic levels. Molecular Ecology 27:14, pages 2913-2925.
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Katarzyna A. Palinska, Janina C. Vogt & Waldemar Surosz. (2017) Biodiversity analysis of the unique geothermal microbial ecosystem of the Blue Lagoon (Iceland) using next-generation sequencing (NGS). Hydrobiologia 811:1, pages 93-102.
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Julia Kleinteich, Stjepko Golubic, Igor S. Pessi, David Velázquez, Jean-Yves Storme, François Darchambeau, Alberto V. Borges, Philippe Compère, Gudrun Radtke, Seong-Joo Lee, Emmanuelle J. Javaux & Annick Wilmotte. (2017) Cyanobacterial Contribution to Travertine Deposition in the Hoyoux River System, Belgium. Microbial Ecology 74:1, pages 33-53.
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