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Original Articles

Distribution and Metabolic Diversity of Microorganisms in Deep Igneous Rock Aquifers of Finland

Pages 277-294 | Published online: 29 Oct 2010

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Read on this site (8)

Kotaro Ise, Yoshito Sasaki, Yuki Amano, Teruki Iwatsuki, Isao Nanjo, Takahiro Asano & Hideki Yoshikawa. (2017) The Succession of Bacterial Community Structure in Groundwater from a 250-m Gallery in the Horonobe Underground Research Laboratory. Geomicrobiology Journal 34:6, pages 489-499.
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Laura J. Liermann, Istvan Albert, Heather L. Buss, Morgan Minyard & Susan L. Brantley. (2015) Relating Microbial Community Structure and Geochemistry in Deep Regolith Developed on Volcaniclastic Rock in the Luquillo Mountains, Puerto Rico. Geomicrobiology Journal 32:6, pages 494-510.
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Mari Nyyssönen, Malin Bomberg, Anu Kapanen, Aura Nousiainen, Petteri Pitkänen & Merja Itävaara. (2012) Methanogenic and Sulphate-Reducing Microbial Communities in Deep Groundwater of Crystalline Rock Fractures in Olkiluoto, Finland. Geomicrobiology Journal 29:10, pages 863-878.
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Elina Sahlstedt, Juha A. Karhu & Petteri Pitkänen. (2010) Indications for the past redox environments in deep groundwaters from the isotopic composition of carbon and oxygen in fracture calcite, Olkiluoto, SW Finland. Isotopes in Environmental and Health Studies 46:3, pages 370-391.
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E.J. Waddell, T.J. Elliott, J.M. Vahrenkamp, W.M. Roggenthen, R.K. Sani, C.M. Anderson & S.S. Bang. (2010) Phylogenetic evidence of noteworthy microflora from the subsurface of the former Homestake gold mine, Lead, South Dakota. Environmental Technology 31:8-9, pages 979-991.
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T. Taylor Eighmy, JeanC. M. Spear, Julia Case, Michelle Mills, Kimberly Newman, NancyE. Kinner, Hallie Marbet, Jose Casas, Wallace Bothner, Joanne Coulburn, LouisS. Tisa, Michelle Majko, EliseR. Sullivan & MaryE. Gonsoulin. (2007) Microfracture Surface Geochemistry and Adherent Microbial Population Metabolism in TCE-Contaminated Competent Bedrock. Geomicrobiology Journal 24:3-4, pages 307-330.
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JamesK. Fredrickson & DavidL. Balkwill. (2006) Geomicrobial Processes and Biodiversity in the Deep Terrestrial Subsurface. Geomicrobiology Journal 23:6, pages 345-356.
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Christopher J. Schuler, Amanda Patsis, Scott C. Alexander, David Hsu, William S. Dowd, Woonghee Lee, Sarick L. Matzen, Matthew A. Marcus, Cody S. Sheik, Jill M. McDermott, Peter K. Kang, Cara M. Santelli & Brandy M. Toner. (2024) Densely populated biofilms and linked iron and sulfur cycles in the fractured-rock continental subsurface. Geochimica et Cosmochimica Acta.
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Magali Ranchou-Peyruse, Marion Guignard, Perla G. Haddad, Sylvain Robin, Fabrice Boesch, Maud Lanot, Hervé Carrier, David Dequidt, Pierre Chiquet, Guilhem Caumette, Pierre Cézac & Anthony Ranchou-Peyruse. (2023) A deep continental aquifer downhole sampler for microbiological studies. Frontiers in Microbiology 13.
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Márta Polgári & Ildikó Gyollai. (2021) Geochemical constraints on the element enrichments of microbially mediated manganese and iron ores – An overview. Ore Geology Reviews 136, pages 104203.
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K. Pedersen. 2020. Groundwater 2000. Groundwater 2000 213 214 .
Lotta Purkamo, Riikka Kietäväinen, Maija Nuppunen-Puputti, Malin Bomberg & Claire Cousins. (2020) Ultradeep Microbial Communities at 4.4 km within Crystalline Bedrock: Implications for Habitability in a Planetary Context. Life 10:1, pages 2.
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. 2020. Freshwater Ecology. Freshwater Ecology 833 948 .
V. V. Kadnikov, A. V. Mardanov, A. V. Beletsky, Y. A. Frank, O. V. Karnachuk & N. V. Ravin. (2019) Genome of a Member of the Candidate Archaeal Phylum Verstraetearchaeota from a Subsurface Thermal Aquifer Revealed Pathways of Methyl-Reducing Methanogenesis and Fermentative Metabolism. Microbiology 88:3, pages 316-323.
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Pinaki Sar, Avishek Dutta, Himadri Bose, Sunanda Mandal & Sufia K. Kazy. 2019. Microbial Diversity in Ecosystem Sustainability and Biotechnological Applications. Microbial Diversity in Ecosystem Sustainability and Biotechnological Applications 225 265 .
Maija Nuppunen-Puputti, Lotta Purkamo, Riikka Kietäväinen, Mari Nyyssönen, Merja Itävaara, Lasse Ahonen, Ilmo Kukkonen & Malin Bomberg. (2018) Rare Biosphere Archaea Assimilate Acetate in Precambrian Terrestrial Subsurface at 2.2 km Depth. Geosciences 8:11, pages 418.
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Lotta Purkamo, Riikka Kietäväinen, Hanna Miettinen, Elina Sohlberg, Ilmo Kukkonen, Merja Itävaara & Malin Bomberg. (2018) Diversity and functionality of archaeal, bacterial and fungal communities in deep Archaean bedrock groundwater. FEMS Microbiology Ecology 94:8.
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Henrik Drake, Magnus Ivarsson, Mikael Tillberg, Martin Whitehouse & Ellen Kooijman. (2018) Ancient Microbial Activity in Deep Hydraulically Conductive Fracture Zones within the Forsmark Target Area for Geological Nuclear Waste Disposal, Sweden. Geosciences 8:6, pages 211.
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Lily Momper, Brandi Kiel Reese, Laura Zinke, Greg Wanger, Magdalena R. Osburn, Duane Moser & Jan P. Amend. (2017) Major phylum‐level differences between porefluid and host rock bacterial communities in the terrestrial deep subsurface. Environmental Microbiology Reports 9:5, pages 501-511.
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E. D. Beaton, Marilyne Stuart, Sim Stroes-Gascoyne, Karen J. King-Sharp, Ioana Gurban, Amy Festarini & Hui Q. Chen. (2017) Spatial Autocorrelation, Source Water and the Distribution of Total and Viable Microbial Abundances within a Crystalline Formation to a Depth of 800 m. Frontiers in Microbiology 8.
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Riikka Kietäväinen, Lasse Ahonen, Paula Niinikoski, Hannu Nykänen & Ilmo T. Kukkonen. (2017) Abiotic and biotic controls on methane formation down to 2.5 km depth within the Precambrian Fennoscandian Shield. Geochimica et Cosmochimica Acta 202, pages 124-145.
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Pauliina Rajala & Malin Bomberg. (2017) Reactivation of Deep Subsurface Microbial Community in Response to Methane or Methanol Amendment. Frontiers in Microbiology 08.
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E. D. Beaton, Bradley S. Stevenson, Karen J. King-Sharp, Blake W. Stamps, Heather S. Nunn & Marilyne Stuart. (2016) Local and Regional Diversity Reveals Dispersal Limitation and Drift as Drivers for Groundwater Bacterial Communities from a Fractured Granite Formation. Frontiers in Microbiology 7.
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Elina Sahlstedt, Juha A. Karhu, Petteri Pitkänen & Martin Whitehouse. (2016) Biogenic processes in crystalline bedrock fractures indicated by carbon isotope signatures of secondary calcite. Applied Geochemistry 67, pages 30-41.
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Hanna Miettinen, Riikka Kietäväinen, Elina Sohlberg, Mikko Numminen, Lasse Ahonen & Merja Itävaara. (2015) Microbiome composition and geochemical characteristics of deep subsurface high-pressure environment, Pyhäsalmi mine Finland. Frontiers in Microbiology 6.
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Malin Bomberg, Mari Nyyss?nen, Petteri Pitk?nen, Anne Lehtinen & Merja It?vaara. (2015) Active Microbial Communities Inhabit Sulphate-Methane Interphase in Deep Bedrock Fracture Fluids in Olkiluoto, Finland. BioMed Research International 2015, pages 1-17.
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Riikka Kietäväinen, Lasse Ahonen, Ilmo T. Kukkonen, Samuel Niedermann & Thomas Wiersberg. (2014) Noble gas residence times of saline waters within crystalline bedrock, Outokumpu Deep Drill Hole, Finland. Geochimica et Cosmochimica Acta 145, pages 159-174.
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A. I. Slobodkin & G. B. Slobodkina. (2014) Thermophilic prokaryotes from deep subterranean habitats. Microbiology 83:3, pages 169-183.
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Malin Bomberg, Mari Nyyssönen, Aura Nousiainen, Jenni Hultman, Lars Paulin, Petri Auvinen & Merja Itävaara. (2014) Evaluation of Molecular Techniques in Characterization of Deep Terrestrial Biosphere. Open Journal of Ecology 04:08, pages 468-487.
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Sean McMahon & John Parnell. (2014) Weighing the deep continental biosphere. FEMS Microbiology Ecology 87:1, pages 113-120.
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Mari Nyyssönen, Jenni Hultman, Lasse Ahonen, Ilmo Kukkonen, Lars Paulin, Pia Laine, Merja Itävaara & Petri Auvinen. (2014) Taxonomically and functionally diverse microbial communities in deep crystalline rocks of the Fennoscandian shield. The ISME Journal 8:1, pages 126-138.
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S.K. Frape, A. Blyth, R.L. Stotler, T. Ruskeeniemi, R. Blomqvist, R.H. McNutt & M. Gascoyne. 2014. Treatise on Geochemistry. Treatise on Geochemistry 517 562 .
Lotta Purkamo, Malin Bomberg, Mari Nyyssönen, Ilmo Kukkonen, Lasse Ahonen, Riikka Kietäväinen & Merja Itävaara. (2013) Dissecting the deep biosphere: retrieving authentic microbial communities from packer-isolated deep crystalline bedrock fracture zones. FEMS Microbiology Ecology 85:2, pages 324-337.
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E. Sahlstedt, J.A. Karhu, P. Pitkänen & M. Whitehouse. (2013) Implications of sulfur isotope fractionation in fracture-filling sulfides in crystalline bedrock, Olkiluoto, Finland. Applied Geochemistry 32, pages 52-69.
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Riikka Kiet?v?inen, Lasse Ahonen, Ilmo T. Kukkonen, Nina Hendriksson, Mari Nyyss?nen & Merja It?vaara. (2013) Characterisation and isotopic evolution of saline waters of the Outokumpu Deep Drill Hole, Finland ? Implications for water origin and deep terrestrial biosphere. Applied Geochemistry 32, pages 37-51.
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Karsten Pedersen. (2012) Subterranean microbial populations metabolize hydrogen and acetate under in situ conditions in granitic groundwater at 450 m depth in the Äspö Hard Rock Laboratory, Sweden. FEMS Microbiology Ecology 81:1, pages 217-229.
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Lotta Hallbeck & Karsten Pedersen. (2012) Culture-dependent comparison of microbial diversity in deep granitic groundwater from two sites considered for a Swedish final repository of spent nuclear fuel. FEMS Microbiology Ecology 81:1, pages 66-77.
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John Parnell, Adrian J. Boyce & Nigel J.F. Blamey. (2010) Follow the methane: the search for a deep biosphere, and the case for sampling serpentinites, on Mars. International Journal of Astrobiology 9:04, pages 193-200.
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Christopher T. Mills, Yuki Amano, Gregory F. Slater, Robert F. Dias, Teruki Iwatsuki & Kevin W. Mandernack. (2010) Microbial carbon cycling in oligotrophic regional aquifers near the Tono Uranium Mine, Japan as inferred from δ13C and Δ14C values of in situ phospholipid fatty acids and carbon sources. Geochimica et Cosmochimica Acta 74:13, pages 3785-3805.
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Jennifer McIntosh, Anna Martini, Steven Petsch, Roger Huang & Klaus N?sslein. (2008) Biogeochemistry of the Forest City Basin coalbed methane play. International Journal of Coal Geology 76:1-2, pages 111-118.
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Karsten Pedersen, Johanna Arlinger, Sara Eriksson, Anna Hallbeck, Lotta Hallbeck & Jessica Johansson. (2008) Numbers, biomass and cultivable diversity of microbial populations relate to depth and borehole-specific conditions in groundwater from depths of 4–450 m in Olkiluoto, Finland. The ISME Journal 2:7, pages 760-775.
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Marcus Laaksoharju, John Smellie, Eva-Lena Tullborg, Mar?a Gimeno, Jorge Molinero, Ioana Gurban & Lotta Hallbeck. (2008) Hydrogeochemical evaluation and modelling performed within the Swedish site investigation programme. Applied Geochemistry 23:7, pages 1761-1795.
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