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Original Articles

Linguistic Measure of Taxonomic and Functional Relatedness of Nucleotide Sequences

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Pages 1251-1268 | Received 27 Nov 1989, Published online: 21 May 2012

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CHRISTOFOROS NIKOLAOU & YANNIS ALMIRANTIS. (2002) A Study of the Middle-scale Nucleotide Clustering in DNA Sequences of Various Origin and Functionality, by means of a Method based on a Modified Standard Deviation. Journal of Theoretical Biology 217:4, pages 479-492.
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DAVID HÄRING & JAROSLAV KYPR. (1999) Variations of the Mononucleotide and Short Oligonucleotide Distributions in the Genomes of Various Organisms. Journal of Theoretical Biology 201:2, pages 141-156.
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F. -U. Gast & R. L. Spieker. (1996) Viroids proper can be distinguished from hammerhead viroids and satellite RNAs through their dinucleotide composition. Archives of Virology 141:9, pages 1775-1783.
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John C. Wootton & Scott Federhen. 1996. Computer Methods for Macromolecular Sequence Analysis. Computer Methods for Macromolecular Sequence Analysis 554 571 .
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S. Bentolila. (1996) A grammar describing ‘biological binding operators’ to model gene regulation. Biochimie 78:5, pages 335-350.
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Hanspeter Herzel, Werner Ebeling, Armin O. Schmitt & Miguel Angel Jiménez-Montaño. 1996. From Simplicity to Complexity in Chemistry — and Beyond. From Simplicity to Complexity in Chemistry — and Beyond 13 32 .
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Romeu Cardoso Guimar�es. (1995) Linguistics of biomolecules and the protein-first hypothesis for the origins of cells. Journal of Biological Physics 20:1-4, pages 193-199.
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Eugene Kolker & Edward N. Trifonov. 1995. Modelling of Biomolecular Structures and Mechanisms. Modelling of Biomolecular Structures and Mechanisms 461 471 .
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Graziano Pesole, Marcella Attimonelli & Cecilia Saccone. (1994) Linguistic approaches to the analysis of sequence information. Trends in Biotechnology 12:10, pages 401-408.
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Gabriel Guti�rrez, Josep Casades�s, Jose L. Oliver & Antonio Marine. (1994) Compositional heterogeneity of the Escherichia coli genome: A role for VSP repair?. Journal of Molecular Evolution 39:4, pages 340-346.
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Shmuel Pietrokovski. (1994) Comparing nucleotide and protein sequences by linguistic methods. Journal of Biotechnology 35:2-3, pages 257-272.
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H. Herzel, A.O. Schmitt & W. Ebeling. (1994) Finite sample effects in sequence analysis. Chaos, Solitons & Fractals 4:1, pages 97-113.
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Angelos Kalogeropoulos. (2004) Linguistic analysis of chromosome III DNA sequence of Saccharomyces cerevisiae . Yeast 9:8, pages 889-905.
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Victor V. Solovyev. (1993) Fractal graphical representation and analysis of DNA and protein sequences. Biosystems 30:1-3, pages 137-160.
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Shmuel Pietrokovski & Edward N. Trifonov. (1992) Imported sequences in the mitochondrial yeast genome identified by nucleotide linguistics. Gene 122:1, pages 129-137.
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Miklos de Zamaroczy & Giorgio Bernardi. (1992) The mosaic organization of the mitochondrial introns of Saccharomyces cerevisiae: features and evolutionary origins. Gene 122:1, pages 91-99.
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