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Journal of Biomolecular Structure and Dynamics Volume 14, 1996 - Issue 1
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Original Articles

CICADA Interface with AMBER. An Application on Oligonucleotides and their Fragments

Eva Fadrná Department of Organic Chemistry, Faculty of Science, Masaryk University, 611 37, Brno, Czech Republic
&
Jaroslav Koča Department of Organic Chemistry, Faculty of Science, Masaryk University, 611 37, Brno, Czech Republic
Pages 137-152 | Received 16 Jan 1996, Published online: 21 May 2012

Citations (7)

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Read on this site (1)

Richard Štefl, Eva Fadrná & Jaroslav Koča. (1999) Differences in Conformational Behavior of ATA and TAT Sequences in Single Strand DNA Trimer. Journal of Biomolecular Structure and Dynamics 16:5, pages 1087-1095.
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Articles from other publishers (6)

José M. Martínez, Sofi K. C. Elmroth & Lars Kloo. (2001) Influence of Sodium Ions on the Dynamics and Structure of Single-Stranded DNA Oligomers:  A Molecular Dynamics Study. Journal of the American Chemical Society 123:49, pages 12279-12289.
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Z. Křı́ž, P.H.J. Carlsen & J. Koča. (2001) Conformational features of linear and cyclic enkephalins. A computational study. Journal of Molecular Structure: THEOCHEM 540:1-3, pages 231-250.
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Jaroslav Koča, Martin Ludin, Serge Pérez & Anne Imberty. (2000) Single-coordinate-driving method for molecular docking: application to modeling of guest inclusion in cyclodextrin. Journal of Molecular Graphics and Modelling 18:2, pages 108-118.
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Pavla Petrová, Jaroslav Koča & Anne Imberty. (1999) Potential Energy Hypersurfaces of Nucleotide Sugars:  Ab Initio Calculations, Force-Field Parametrization, and Exploration of the Flexibility. Journal of the American Chemical Society 121:23, pages 5535-5547.
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Jaroslav Koča. (1998) Travelling through conformational space: an approach for analyzing the conformational behaviour of flexible molecules. Progress in Biophysics and Molecular Biology 70:2, pages 137-173.
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Eva Fadrná & Jaroslav Koča. (1997) Single-Coordinate-Driving Method Coupled with Simulated Annealing . An Efficient Tool To Search Conformational Space . The Journal of Physical Chemistry B 101:39, pages 7863-7868.
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