Advanced search
Publication Cover
Journal of Biomolecular Structure and Dynamics Volume 18, 2000 - Issue 1
Journal homepage
26
Views
7
CrossRef citations to date
0
Altmetric
Original Articles

Effect of Neighboring Bases on Base-Pair Stacking Orientation: A Molecular Dynamics Study

Debashree Bandyopadhyay Biophysics Division, Saha Institute of Nuclear Physics, 37 Belgachia Road, Calcutta, 700037, India
&
Dhananjay Bhattacharyya Biophysics Division, Saha Institute of Nuclear Physics, 37 Belgachia Road, Calcutta, 700037, India
Pages 29-43 | Received 19 Apr 2000, Published online: 15 May 2012

Citations (7)

Keep up to date with the latest research on this topic with citation updates for this article.

Subscribe to citation updates

Read on this site (3)

Sudipta Samanta, Jaydeb Chakrabarti & Dhananjay Bhattacharyya. (2010) Changes in Thermodynamic Properties of DNA Base Pairs in Protein-DNA Recognition. Journal of Biomolecular Structure and Dynamics 27:4, pages 429-442.
Read now
Debashree Bandyopadhyay & Dhananjay Bhattacharyya. (2002) Effect of Flanking Residues on CA and AA Dinucleotides: Some Rationale. Journal of Biomolecular Structure and Dynamics 19:4, pages 659-667.
Read now
Utz Dornberger, Nadezda Spacková, Axel Walter, FriedrichA. Gollmick, Jirí Sponer & Hartmut Fritzsche. (2001) Solution Structure of the Dodecamer d-(CATGGGCC-CATG)2 is B-DNA. Experimental and Molecular Dynamics Study. Journal of Biomolecular Structure and Dynamics 19:1, pages 159-174.
Read now

Articles from other publishers (4)

Dhananjay Bhattacharyya, Sukanya Halder, Sankar Basu, Debasish Mukherjee, Prasun Kumar & Manju Bansal. (2017) RNAHelix: computational modeling of nucleic acid structures with Watson–Crick and non-canonical base pairs. Journal of Computer-Aided Molecular Design 31:2, pages 219-235.
Crossref
Sudipta Samanta, Supti Mukherjee, Jaydeb Chakrabarti & Dhananjay Bhattacharyya. (2009) Structural properties of polymeric DNA from molecular dynamics simulations. The Journal of Chemical Physics 130:11.
Crossref
James E. Masse, Ben Wong, Yi-Meng Yen, Frédéric H.-T. Allain, Reid C. Johnson & Juli Feigon. (2002) The S.cerevisiae Architectural HMGB Protein NHP6A Complexed with DNA: DNA and Protein Conformational Changes upon Binding. Journal of Molecular Biology 323:2, pages 263-284.
Crossref
Emmanuel Giudice & Richard Lavery. (2002) Simulations of Nucleic Acids and Their Complexes. Accounts of Chemical Research 35:6, pages 350-357.
Crossref

Reprints and Corporate Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

To request a reprint or corporate permissions for this article, please click on the relevant link below:

Order Reprints Request Corporate Permissions

Academic Permissions

Please note: Selecting permissions does not provide access to the full text of the article, please see our help page How do I view content?

Obtain permissions instantly via Rightslink by clicking on the button below:

Request Academic Permissions

If you are unable to obtain permissions via Rightslink, please complete and submit this Permissions form. For more information, please visit our Permissions help page.

Related research

People also read lists articles that other readers of this article have read.

Recommended articles lists articles that we recommend and is powered by our AI driven recommendation engine.

Cited by lists all citing articles based on Crossref citations.
Articles with the Crossref icon will open in a new tab.